RNA–Protein interactions for RNA: ENST00000397760.8

PDLIM2-204, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-204ENST00000397760 ADCK5Q3MIX3 580 aa22.94■■□□□ 1.26
PDLIM2-204ENST00000397760 DACT2Q5SW24 774 aa22.94■■□□□ 1.26
PDLIM2-204ENST00000397760 SLF2Q8IX21 1173 aa22.94■■□□□ 1.26
PDLIM2-204ENST00000397760 IFNL3Q8IZI9 196 aa22.94■■□□□ 1.26
PDLIM2-204ENST00000397760 NFKBIEO00221 500 aa22.94■■□□□ 1.26
PDLIM2-204ENST00000397760 NEK4P51957 841 aa22.94■■□□□ 1.26
PDLIM2-204ENST00000397760 FKBP1AP62942 108 aaKnown RBP22.94■■□□□ 1.26
PDLIM2-204ENST00000397760 ALX1Q15699 326 aa22.94■■□□□ 1.26
PDLIM2-204ENST00000397760 JAKMIP1Q96N16 626 aaKnown RBP22.94■■□□□ 1.26
PDLIM2-204ENST00000397760 CWC22Q9HCG8 908 aaKnown RBP22.94■■□□□ 1.26
PDLIM2-204ENST00000397760 MROH7-TTC4A0A0A0MT08 1334 aa22.93■■□□□ 1.26
PDLIM2-204ENST00000397760 F8W031 263 aaPredicted RBP22.93■■□□□ 1.26
PDLIM2-204ENST00000397760 IMMTQ16891 758 aaKnown RBP22.93■■□□□ 1.26
PDLIM2-204ENST00000397760 FAM163AQ96GL9 167 aaPredicted RBP22.93■■□□□ 1.26
PDLIM2-204ENST00000397760 UPF3BQ9BZI7 483 aaKnown RBP22.93■■□□□ 1.26
PDLIM2-204ENST00000397760 NACAP1Q9BZK3 213 aa22.93■■□□□ 1.26
PDLIM2-204ENST00000397760 EPB41L4AQ9HCS5 686 aaPredicted RBP22.93■■□□□ 1.26
PDLIM2-204ENST00000397760 MAST2Q6P0Q8 1798 aa22.92■■□□□ 1.26
PDLIM2-204ENST00000397760 GOLGA6L22H0YM25 854 aa22.92■■□□□ 1.26
PDLIM2-204ENST00000397760 ST18O60284 1047 aa22.92■■□□□ 1.26
PDLIM2-204ENST00000397760 BAG3O95817 575 aa22.92■■□□□ 1.26
PDLIM2-204ENST00000397760 NUCB2P80303 420 aa22.92■■□□□ 1.26
PDLIM2-204ENST00000397760 KRT32Q14532 448 aa22.92■■□□□ 1.26
PDLIM2-204ENST00000397760 NIM1KQ8IY84 436 aa22.92■■□□□ 1.26
PDLIM2-204ENST00000397760 NOL10Q9BSC4 688 aaKnown RBP22.92■■□□□ 1.26
PDLIM2-204ENST00000397760 TM6SF1Q9BZW5 370 aa22.92■■□□□ 1.26
PDLIM2-204ENST00000397760 NAPBQ9H115 298 aa22.92■■□□□ 1.26
PDLIM2-204ENST00000397760 TTF2Q9UNY4 1162 aaKnown RBP22.92■■□□□ 1.26
PDLIM2-204ENST00000397760 RPAP1Q9BWH6 1393 aaPredicted RBP22.92■■□□□ 1.26
PDLIM2-204ENST00000397760 CASTP20810 708 aaKnown RBP22.92■■□□□ 1.26
PDLIM2-204ENST00000397760 PSMA5P28066 241 aa22.92■■□□□ 1.26
PDLIM2-204ENST00000397760 SDR42E1Q8WUS8 393 aa22.92■■□□□ 1.26
PDLIM2-204ENST00000397760 GOLGB1Q14789 3259 aaKnown RBP22.91■■□□□ 1.26
PDLIM2-204ENST00000397760 ZNF213O14771 459 aa22.91■■□□□ 1.26
PDLIM2-204ENST00000397760 XRCC6P12956 609 aaKnown RBP eCLIP22.91■■□□□ 1.26
PDLIM2-204ENST00000397760 PPP4CP60510 307 aa22.91■■□□□ 1.26
PDLIM2-204ENST00000397760 SYT17Q9BSW7 474 aa22.91■■□□□ 1.26
PDLIM2-204ENST00000397760 CRNKL1Q9BZJ0 848 aaKnown RBP22.91■■□□□ 1.26
PDLIM2-204ENST00000397760 ZMYM6O95789 1325 aa22.9■■□□□ 1.26
PDLIM2-204ENST00000397760 TDO2P48775 406 aa22.9■■□□□ 1.26
PDLIM2-204ENST00000397760 HAND2P61296 217 aa22.9■■□□□ 1.26
PDLIM2-204ENST00000397760 ZSWIM6Q9HCJ5 1215 aa22.9■■□□□ 1.26
PDLIM2-204ENST00000397760 RTN4Q9NQC3 1192 aaKnown RBP22.9■■□□□ 1.26
PDLIM2-204ENST00000397760 ZNRF3Q9ULT6 936 aa22.9■■□□□ 1.26
PDLIM2-204ENST00000397760 CCDC88AQ3V6T2 1871 aa22.9■■□□□ 1.26
PDLIM2-204ENST00000397760 LTBP3Q9NS15 1303 aa22.9■■□□□ 1.26
PDLIM2-204ENST00000397760 GPR75-ASB3A0A0A6YYF3 556 aa22.89■■□□□ 1.26
PDLIM2-204ENST00000397760 BTDP43251 543 aa22.89■■□□□ 1.26
PDLIM2-204ENST00000397760 GAKO14976 1311 aa22.89■■□□□ 1.25
PDLIM2-204ENST00000397760 CPA1P15085 419 aa22.89■■□□□ 1.25
PDLIM2-204ENST00000397760 CERS3Q8IU89 383 aa22.89■■□□□ 1.25
PDLIM2-204ENST00000397760 CYP46A1Q9Y6A2 500 aa22.89■■□□□ 1.25
PDLIM2-204ENST00000397760 COL4A5P29400 1685 aa22.88■■□□□ 1.25
PDLIM2-204ENST00000397760 RAD17O75943 681 aa22.88■■□□□ 1.25
PDLIM2-204ENST00000397760 SCNN1DP51172 638 aa22.88■■□□□ 1.25
PDLIM2-204ENST00000397760 RASSF7Q02833 373 aa22.88■■□□□ 1.25
PDLIM2-204ENST00000397760 STOX1Q6ZVD7 989 aa22.88■■□□□ 1.25
PDLIM2-204ENST00000397760 KIAA0825Q8IV33 1275 aa22.88■■□□□ 1.25
PDLIM2-204ENST00000397760 SH3RF3Q8TEJ3 882 aaPredicted RBP22.88■■□□□ 1.25
PDLIM2-204ENST00000397760 JDP2Q8WYK2 163 aa22.88■■□□□ 1.25
PDLIM2-204ENST00000397760 NEK1Q96PY6 1258 aa22.88■■□□□ 1.25
PDLIM2-204ENST00000397760 DAGLAQ9Y4D2 1042 aa22.88■■□□□ 1.25
PDLIM2-204ENST00000397760 E7EWF7 191 aa22.87■■□□□ 1.25
PDLIM2-204ENST00000397760 GIMAP6Q6P9H5 292 aa22.87■■□□□ 1.25
PDLIM2-204ENST00000397760 BLOC1S2Q6QNY1 142 aa22.87■■□□□ 1.25
PDLIM2-204ENST00000397760 RUFY3Q7L099 469 aa22.87■■□□□ 1.25
PDLIM2-204ENST00000397760 SCN9AQ15858 1988 aa22.87■■□□□ 1.25
PDLIM2-204ENST00000397760 GZF1Q9H116 711 aaPredicted RBP22.87■■□□□ 1.25
PDLIM2-204ENST00000397760 FER1L6Q2WGJ9 1857 aa22.87■■□□□ 1.25
PDLIM2-204ENST00000397760 PSMD14O00487 310 aa22.86■■□□□ 1.25
PDLIM2-204ENST00000397760 VIL1P09327 827 aaKnown RBP22.86■■□□□ 1.25
PDLIM2-204ENST00000397760 PLCG2P16885 1265 aa22.86■■□□□ 1.25
PDLIM2-204ENST00000397760 MCM2P49736 904 aa22.86■■□□□ 1.25
PDLIM2-204ENST00000397760 HHIPL2Q6UWX4 724 aa22.86■■□□□ 1.25
PDLIM2-204ENST00000397760 TEKT1Q969V4 418 aa22.86■■□□□ 1.25
PDLIM2-204ENST00000397760 ATP8A2Q9NTI2 1148 aa22.86■■□□□ 1.25
PDLIM2-204ENST00000397760 RSBN1LQ6PCB5 846 aaPredicted RBP22.85■■□□□ 1.25
PDLIM2-204ENST00000397760 TTC14Q96N46 770 aa22.85■■□□□ 1.25
PDLIM2-204ENST00000397760 MRIQ9BWK5 157 aa22.85■■□□□ 1.25
PDLIM2-204ENST00000397760 DCP1AQ9NPI6 582 aaPredicted RBP22.85■■□□□ 1.25
PDLIM2-204ENST00000397760 PDRG1Q9NUG6 133 aa22.85■■□□□ 1.25
PDLIM2-204ENST00000397760 USP5P45974 858 aa22.85■■□□□ 1.25
PDLIM2-204ENST00000397760 COL9A3Q14050 684 aaPredicted RBP22.85■■□□□ 1.25
PDLIM2-204ENST00000397760 NBPF3Q9H094 633 aa22.85■■□□□ 1.25
PDLIM2-204ENST00000397760 RPS6KB1P23443 525 aa22.84■■□□□ 1.25
PDLIM2-204ENST00000397760 CRKP46108 304 aa22.84■■□□□ 1.25
PDLIM2-204ENST00000397760 HDLBPQ00341 1268 aaKnown RBP22.84■■□□□ 1.25
PDLIM2-204ENST00000397760 ARHGAP27Q6ZUM4 889 aa22.84■■□□□ 1.25
PDLIM2-204ENST00000397760 GRPEL1Q9HAV7 217 aa22.84■■□□□ 1.25
PDLIM2-204ENST00000397760 MYO3BQ8WXR4 1341 aa22.84■■□□□ 1.25
PDLIM2-204ENST00000397760 HMGB1P09429 215 aaKnown RBP22.83■■□□□ 1.25
PDLIM2-204ENST00000397760 RHBDL3P58872 404 aa22.83■■□□□ 1.25
PDLIM2-204ENST00000397760 CXCL9Q07325 125 aa22.83■■□□□ 1.25
PDLIM2-204ENST00000397760 TGFBRAP1Q8WUH2 860 aa22.83■■□□□ 1.25
PDLIM2-204ENST00000397760 MYH2Q9UKX2 1941 aa22.83■■□□□ 1.24
PDLIM2-204ENST00000397760 PRELPP51888 382 aa22.82■■□□□ 1.24
PDLIM2-204ENST00000397760 CTDSPL2Q05D32 466 aa22.82■■□□□ 1.24
PDLIM2-204ENST00000397760 CTR9Q6PD62 1173 aa22.82■■□□□ 1.24
PDLIM2-204ENST00000397760 TBC1D10CQ8IV04 446 aa22.82■■□□□ 1.24
PDLIM2-204ENST00000397760 TEX11Q8IYF3 940 aa22.82■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms