RNA–Protein interactions for RNA: ENST00000397709.1

MAP1LC3A-203, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

APPRIS P1 TSL 3 BASIC

Gene MAP1LC3A, Length 698 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-203ENST00000397709 DLGAP5Q15398 846 aa23.42■■□□□ 1.34
MAP1LC3A-203ENST00000397709 SAMD7Q7Z3H4 446 aa23.42■■□□□ 1.34
MAP1LC3A-203ENST00000397709 RUFY2Q8WXA3 655 aa23.42■■□□□ 1.34
MAP1LC3A-203ENST00000397709 NOL10Q9BSC4 688 aaKnown RBP23.42■■□□□ 1.34
MAP1LC3A-203ENST00000397709 IL25Q9H293 177 aa23.42■■□□□ 1.34
MAP1LC3A-203ENST00000397709 POTECB2RU33 542 aa23.41■■□□□ 1.34
MAP1LC3A-203ENST00000397709 SGSM2O43147 1006 aa23.41■■□□□ 1.34
MAP1LC3A-203ENST00000397709 GPAA1O43292 621 aa23.41■■□□□ 1.34
MAP1LC3A-203ENST00000397709 EGFRP00533 1210 aa23.41■■□□□ 1.34
MAP1LC3A-203ENST00000397709 KIF4BQ2VIQ3 1234 aa23.41■■□□□ 1.34
MAP1LC3A-203ENST00000397709 ZNF589Q86UQ0 364 aaPredicted RBP23.41■■□□□ 1.34
MAP1LC3A-203ENST00000397709 CERS3Q8IU89 383 aa23.41■■□□□ 1.34
MAP1LC3A-203ENST00000397709 LCORLQ8N3X6 602 aa23.41■■□□□ 1.34
MAP1LC3A-203ENST00000397709 AIDAQ96BJ3 306 aa23.41■■□□□ 1.34
MAP1LC3A-203ENST00000397709 PRMT6Q96LA8 375 aaPredicted RBP23.41■■□□□ 1.34
MAP1LC3A-203ENST00000397709 ESYT1Q9BSJ8 1104 aa23.41■■□□□ 1.34
MAP1LC3A-203ENST00000397709 ADARB2Q9NS39 739 aaKnown RBP23.41■■□□□ 1.34
MAP1LC3A-203ENST00000397709 HACL1Q9UJ83 578 aa23.41■■□□□ 1.34
MAP1LC3A-203ENST00000397709 ECM29Q5VYK3 1845 aa23.4■■□□□ 1.34
MAP1LC3A-203ENST00000397709 RHBDL3P58872 404 aa23.4■■□□□ 1.34
MAP1LC3A-203ENST00000397709 TBC1D10BQ4KMP7 808 aaPredicted RBP23.4■■□□□ 1.34
MAP1LC3A-203ENST00000397709 CCDC129Q6ZRS4 1044 aa23.4■■□□□ 1.34
MAP1LC3A-203ENST00000397709 TRPM4Q8TD43 1214 aa23.4■■□□□ 1.34
MAP1LC3A-203ENST00000397709 ARMT1Q9H993 441 aa23.4■■□□□ 1.34
MAP1LC3A-203ENST00000397709 CCDC171Q6TFL3 1326 aa23.39■■□□□ 1.34
MAP1LC3A-203ENST00000397709 IQCA1LA6NCM1 817 aa23.39■■□□□ 1.33
MAP1LC3A-203ENST00000397709 WNT10BO00744 389 aa23.39■■□□□ 1.33
MAP1LC3A-203ENST00000397709 PLCG2P16885 1265 aa23.39■■□□□ 1.33
MAP1LC3A-203ENST00000397709 C8orf34Q49A92 452 aa23.39■■□□□ 1.33
MAP1LC3A-203ENST00000397709 CDC42EP5Q6NZY7 148 aa23.39■■□□□ 1.33
MAP1LC3A-203ENST00000397709 STRBPQ96SI9 672 aaKnown RBP23.39■■□□□ 1.33
MAP1LC3A-203ENST00000397709 CDK5RAP2Q96SN8 1893 aa23.39■■□□□ 1.33
MAP1LC3A-203ENST00000397709 NBPF9Q3BBW0 867 aa23.38■■□□□ 1.33
MAP1LC3A-203ENST00000397709 RBM26Q5T8P6 1007 aaKnown RBP23.38■■□□□ 1.33
MAP1LC3A-203ENST00000397709 SH3RF3Q8TEJ3 882 aaPredicted RBP23.38■■□□□ 1.33
MAP1LC3A-203ENST00000397709 USP40Q9NVE5 1235 aa23.38■■□□□ 1.33
MAP1LC3A-203ENST00000397709 EPHX2P34913 555 aa23.37■■□□□ 1.33
MAP1LC3A-203ENST00000397709 HIRAP54198 1017 aaPredicted RBP23.37■■□□□ 1.33
MAP1LC3A-203ENST00000397709 SPDYE2Q495Y8 402 aa23.37■■□□□ 1.33
MAP1LC3A-203ENST00000397709 TAF1DQ9H5J8 278 aaPredicted RBP23.37■■□□□ 1.33
MAP1LC3A-203ENST00000397709 FOCADQ5VW36 1801 aa23.37■■□□□ 1.33
MAP1LC3A-203ENST00000397709 MFAP1P55081 439 aaKnown RBP23.36■■□□□ 1.33
MAP1LC3A-203ENST00000397709 TDRD3Q9H7E2 651 aaKnown RBP23.36■■□□□ 1.33
MAP1LC3A-203ENST00000397709 WDHD1O75717 1129 aaPredicted RBP23.35■■□□□ 1.33
MAP1LC3A-203ENST00000397709 GNAT2P19087 354 aa23.35■■□□□ 1.33
MAP1LC3A-203ENST00000397709 USP50Q70EL3 339 aaPredicted RBP23.35■■□□□ 1.33
MAP1LC3A-203ENST00000397709 TEX11Q8IYF3 940 aa23.35■■□□□ 1.33
MAP1LC3A-203ENST00000397709 CRNKL1Q9BZJ0 848 aaKnown RBP23.35■■□□□ 1.33
MAP1LC3A-203ENST00000397709 ZNF70Q9UC06 446 aaPredicted RBP23.35■■□□□ 1.33
MAP1LC3A-203ENST00000397709 FOXP2O15409 715 aa23.34■■□□□ 1.33
MAP1LC3A-203ENST00000397709 PRKAB2O43741 272 aa23.34■■□□□ 1.33
MAP1LC3A-203ENST00000397709 MYO1BO43795 1136 aa23.34■■□□□ 1.33
MAP1LC3A-203ENST00000397709 RRAGCQ9HB90 399 aa23.34■■□□□ 1.33
MAP1LC3A-203ENST00000397709 SLC4A4Q9Y6R1 1079 aa23.34■■□□□ 1.33
MAP1LC3A-203ENST00000397709 RPAP1Q9BWH6 1393 aaPredicted RBP23.33■■□□□ 1.33
MAP1LC3A-203ENST00000397709 CLRN2A0PK11 232 aa23.33■■□□□ 1.33
MAP1LC3A-203ENST00000397709 VPS53Q5VIR6 699 aa23.33■■□□□ 1.33
MAP1LC3A-203ENST00000397709 IDI2Q9BXS1 227 aa23.33■■□□□ 1.33
MAP1LC3A-203ENST00000397709 ASTN2O75129 1339 aaPredicted RBP23.33■■□□□ 1.32
MAP1LC3A-203ENST00000397709 NAV1Q8NEY1 1877 aa23.32■■□□□ 1.32
MAP1LC3A-203ENST00000397709 PATL2C9JE40 543 aaKnown RBP23.32■■□□□ 1.32
MAP1LC3A-203ENST00000397709 HSPD1P10809 573 aaKnown RBP23.32■■□□□ 1.32
MAP1LC3A-203ENST00000397709 VEGFAP15692 232 aaPredicted RBP23.32■■□□□ 1.32
MAP1LC3A-203ENST00000397709 TGFBRAP1Q8WUH2 860 aa23.32■■□□□ 1.32
MAP1LC3A-203ENST00000397709 SDR42E1Q8WUS8 393 aa23.32■■□□□ 1.32
MAP1LC3A-203ENST00000397709 TMOD2Q9NZR1 351 aa23.32■■□□□ 1.32
MAP1LC3A-203ENST00000397709 DDX60LQ5H9U9 1706 aaKnown RBP23.32■■□□□ 1.32
MAP1LC3A-203ENST00000397709 GSG1L2A8MUP6 293 aa23.31■■□□□ 1.32
MAP1LC3A-203ENST00000397709 NPM3O75607 178 aaKnown RBP23.31■■□□□ 1.32
MAP1LC3A-203ENST00000397709 CACNB3P54284 484 aa23.31■■□□□ 1.32
MAP1LC3A-203ENST00000397709 NFIAQ12857 509 aa23.31■■□□□ 1.32
MAP1LC3A-203ENST00000397709 FKBP1CQ5VVH2 108 aa23.31■■□□□ 1.32
MAP1LC3A-203ENST00000397709 PNMA8AQ86V59 439 aaPredicted RBP23.31■■□□□ 1.32
MAP1LC3A-203ENST00000397709 ZNF526Q8TF50 670 aaPredicted RBP23.31■■□□□ 1.32
MAP1LC3A-203ENST00000397709 DSCC1Q9BVC3 393 aa23.31■■□□□ 1.32
MAP1LC3A-203ENST00000397709 LSG1Q9H089 658 aaKnown RBP23.31■■□□□ 1.32
MAP1LC3A-203ENST00000397709 EPB41L4AQ9HCS5 686 aaPredicted RBP23.31■■□□□ 1.32
MAP1LC3A-203ENST00000397709 NMRK2Q9NPI5 230 aa23.31■■□□□ 1.32
MAP1LC3A-203ENST00000397709 DDX4Q9NQI0 724 aaKnown RBP23.31■■□□□ 1.32
MAP1LC3A-203ENST00000397709 MKRN1Q9UHC7 482 aaKnown RBP23.31■■□□□ 1.32
MAP1LC3A-203ENST00000397709 FLT1P17948 1338 aa23.31■■□□□ 1.32
MAP1LC3A-203ENST00000397709 USP5P45974 858 aa23.3■■□□□ 1.32
MAP1LC3A-203ENST00000397709 GIMAP6Q6P9H5 292 aa23.3■■□□□ 1.32
MAP1LC3A-203ENST00000397709 VEZTQ9HBM0 779 aa23.3■■□□□ 1.32
MAP1LC3A-203ENST00000397709 DCP1AQ9NPI6 582 aaPredicted RBP23.3■■□□□ 1.32
MAP1LC3A-203ENST00000397709 ATP8A2Q9NTI2 1148 aa23.3■■□□□ 1.32
MAP1LC3A-203ENST00000397709 FAM198AQ9UFP1 575 aa23.3■■□□□ 1.32
MAP1LC3A-203ENST00000397709 PITPNM2Q9BZ72 1349 aa23.3■■□□□ 1.32
MAP1LC3A-203ENST00000397709 PTH1RQ03431 593 aa23.29■■□□□ 1.32
MAP1LC3A-203ENST00000397709 ANGEL2Q5VTE6 544 aaKnown RBP23.29■■□□□ 1.32
MAP1LC3A-203ENST00000397709 KIAA1211Q6ZU35 1233 aa23.29■■□□□ 1.32
MAP1LC3A-203ENST00000397709 MAPKAPK5Q8IW41 473 aa23.29■■□□□ 1.32
MAP1LC3A-203ENST00000397709 ZC3H15Q8WU90 426 aaKnown RBP23.29■■□□□ 1.32
MAP1LC3A-203ENST00000397709 ANO2Q9NQ90 1003 aa23.29■■□□□ 1.32
MAP1LC3A-203ENST00000397709 GGA3Q9NZ52 723 aa23.29■■□□□ 1.32
MAP1LC3A-203ENST00000397709 PGAP2Q9UHJ9 254 aa23.29■■□□□ 1.32
MAP1LC3A-203ENST00000397709 ZMYM6O95789 1325 aa23.29■■□□□ 1.32
MAP1LC3A-203ENST00000397709 CNTNAP1P78357 1384 aa23.28■■□□□ 1.32
MAP1LC3A-203ENST00000397709 EIF5BO60841 1220 aaKnown RBP23.28■■□□□ 1.32
MAP1LC3A-203ENST00000397709 ENTPD3O75355 529 aa23.28■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms