RNA–Protein interactions for RNA: ENST00000397378.7

NEDD9-203, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 470 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-203ENST00000397378 C8orf58Q8NAV2 365 aa12.07□□□□□ -0.48
NEDD9-203ENST00000397378 ZKSCAN4Q969J2 545 aaPredicted RBP12.07□□□□□ -0.48
NEDD9-203ENST00000397378 PLA2G12BQ9BX93 195 aa12.07□□□□□ -0.48
NEDD9-203ENST00000397378 NBPF3Q9H094 633 aa12.07□□□□□ -0.48
NEDD9-203ENST00000397378 NEURL1BA8MQ27 555 aa12.06□□□□□ -0.48
NEDD9-203ENST00000397378 ITGA6P23229 1130 aa12.06□□□□□ -0.48
NEDD9-203ENST00000397378 MDM2Q00987 491 aaPredicted RBP12.06□□□□□ -0.48
NEDD9-203ENST00000397378 C15orf52Q6ZUT6 534 aaKnown RBP12.06□□□□□ -0.48
NEDD9-203ENST00000397378 UBE3BQ7Z3V4 1068 aa12.06□□□□□ -0.48
NEDD9-203ENST00000397378 PXYLP1Q8TE99 480 aa12.06□□□□□ -0.48
NEDD9-203ENST00000397378 PARK7Q99497 189 aaKnown RBP12.06□□□□□ -0.48
NEDD9-203ENST00000397378 MPHOSPH8Q99549 860 aa12.06□□□□□ -0.48
NEDD9-203ENST00000397378 CDX2Q99626 313 aaPredicted RBP12.06□□□□□ -0.48
NEDD9-203ENST00000397378 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.06□□□□□ -0.48
NEDD9-203ENST00000397378 C11orf49Q9H6J7 331 aa12.06□□□□□ -0.48
NEDD9-203ENST00000397378 TNPO2O14787 897 aaKnown RBP12.05□□□□□ -0.48
NEDD9-203ENST00000397378 FKBP1AP62942 108 aaKnown RBP12.05□□□□□ -0.48
NEDD9-203ENST00000397378 CWF19L2Q2TBE0 894 aaKnown RBP12.05□□□□□ -0.48
NEDD9-203ENST00000397378 LAMA2P24043 3122 aaKnown RBP12.05□□□□□ -0.48
NEDD9-203ENST00000397378 COL2A1P02458 1487 aaPredicted RBP12.04□□□□□ -0.48
NEDD9-203ENST00000397378 CSF1RP07333 972 aa12.04□□□□□ -0.48
NEDD9-203ENST00000397378 CYP2C8P10632 490 aa12.04□□□□□ -0.48
NEDD9-203ENST00000397378 BCRP11274 1271 aa12.04□□□□□ -0.48
NEDD9-203ENST00000397378 PPATQ06203 517 aa12.04□□□□□ -0.48
NEDD9-203ENST00000397378 CHRNDQ07001 517 aa12.04□□□□□ -0.48
NEDD9-203ENST00000397378 ZNF804AQ7Z570 1209 aa12.04□□□□□ -0.48
NEDD9-203ENST00000397378 TTF2Q9UNY4 1162 aaKnown RBP12.04□□□□□ -0.48
NEDD9-203ENST00000397378 SNAP23O00161 211 aa12.03□□□□□ -0.48
NEDD9-203ENST00000397378 APAF1O14727 1248 aa12.03□□□□□ -0.48
NEDD9-203ENST00000397378 IL1R1P14778 569 aa12.03□□□□□ -0.48
NEDD9-203ENST00000397378 HOXD11P31277 338 aaPredicted RBP12.03□□□□□ -0.48
NEDD9-203ENST00000397378 CASP7P55210 303 aa12.03□□□□□ -0.48
NEDD9-203ENST00000397378 IRF5Q13568 498 aa12.03□□□□□ -0.48
NEDD9-203ENST00000397378 TJAP1Q5JTD0 557 aa12.03□□□□□ -0.48
NEDD9-203ENST00000397378 DZIP1LQ8IYY4 767 aaKnown RBP12.03□□□□□ -0.48
NEDD9-203ENST00000397378 TSPYL6Q8N831 410 aa12.03□□□□□ -0.48
NEDD9-203ENST00000397378 MYLIPQ8WY64 445 aa12.03□□□□□ -0.48
NEDD9-203ENST00000397378 STK31Q9BXU1 1019 aa12.03□□□□□ -0.48
NEDD9-203ENST00000397378 SERPINA10Q9UK55 444 aa12.03□□□□□ -0.48
NEDD9-203ENST00000397378 FOSL2P15408 326 aa12.02□□□□□ -0.49
NEDD9-203ENST00000397378 GCKRQ14397 625 aa12.02□□□□□ -0.49
NEDD9-203ENST00000397378 ANKRD18BA2A2Z9 1011 aa12.01□□□□□ -0.49
NEDD9-203ENST00000397378 TAF5LO75529 589 aa12.01□□□□□ -0.49
NEDD9-203ENST00000397378 CACNB3P54284 484 aa12.01□□□□□ -0.49
NEDD9-203ENST00000397378 MFSD14BQ5SR56 506 aa12.01□□□□□ -0.49
NEDD9-203ENST00000397378 DCAF15Q66K64 600 aa12.01□□□□□ -0.49
NEDD9-203ENST00000397378 HOOK2Q96ED9 719 aa12.01□□□□□ -0.49
NEDD9-203ENST00000397378 LBHD1Q9BQE6 289 aaPredicted RBP12.01□□□□□ -0.49
NEDD9-203ENST00000397378 MYH16Q9H6N6 1097 aa12.01□□□□□ -0.49
NEDD9-203ENST00000397378 CDH23Q9H251 3354 aa12.01□□□□□ -0.49
NEDD9-203ENST00000397378 INPP5BP32019 993 aa12□□□□□ -0.49
NEDD9-203ENST00000397378 CRKP46108 304 aa12□□□□□ -0.49
NEDD9-203ENST00000397378 MAP3K12Q12852 859 aa12□□□□□ -0.49
NEDD9-203ENST00000397378 G2E3Q7L622 706 aa12□□□□□ -0.49
NEDD9-203ENST00000397378 COA7Q96BR5 231 aa12□□□□□ -0.49
NEDD9-203ENST00000397378 ZNF341Q9BYN7 854 aa12□□□□□ -0.49
NEDD9-203ENST00000397378 SEMA6BQ9H3T3 888 aa12□□□□□ -0.49
NEDD9-203ENST00000397378 HMX1Q9NP08 348 aaPredicted RBP12□□□□□ -0.49
NEDD9-203ENST00000397378 KCNH4Q9UQ05 1017 aa12□□□□□ -0.49
NEDD9-203ENST00000397378 PFASO15067 1338 aa12□□□□□ -0.49
NEDD9-203ENST00000397378 HMGCRP04035 888 aa11.99□□□□□ -0.49
NEDD9-203ENST00000397378 MOGSQ13724 837 aa11.99□□□□□ -0.49
NEDD9-203ENST00000397378 MIGA2Q7L4E1 593 aa11.99□□□□□ -0.49
NEDD9-203ENST00000397378 LINS1Q8NG48 757 aa11.99□□□□□ -0.49
NEDD9-203ENST00000397378 TMOD2Q9NZR1 351 aa11.99□□□□□ -0.49
NEDD9-203ENST00000397378 TTC28Q96AY4 2481 aa11.99□□□□□ -0.49
NEDD9-203ENST00000397378 SLC4A2P04920 1241 aa11.98□□□□□ -0.49
NEDD9-203ENST00000397378 DDX10Q13206 875 aaKnown RBP11.98□□□□□ -0.49
NEDD9-203ENST00000397378 IFIT5Q13325 482 aaKnown RBP11.98□□□□□ -0.49
NEDD9-203ENST00000397378 TWISTNBQ3B726 338 aaPredicted RBP11.98□□□□□ -0.49
NEDD9-203ENST00000397378 GPAT2Q6NUI2 795 aa11.98□□□□□ -0.49
NEDD9-203ENST00000397378 SMCR8Q8TEV9 937 aaPredicted RBP11.98□□□□□ -0.49
NEDD9-203ENST00000397378 DNAAF4Q8WXU2 420 aa11.98□□□□□ -0.49
NEDD9-203ENST00000397378 FLIIQ13045 1269 aa11.97□□□□□ -0.49
NEDD9-203ENST00000397378 OGDHLQ9ULD0 1010 aa11.97□□□□□ -0.49
NEDD9-203ENST00000397378 DOCK3Q8IZD9 2030 aa11.97□□□□□ -0.49
NEDD9-203ENST00000397378 FOXO4P98177 505 aa11.96□□□□□ -0.49
NEDD9-203ENST00000397378 TRIM32Q13049 653 aa11.96□□□□□ -0.49
NEDD9-203ENST00000397378 FKBP5Q13451 457 aaPredicted RBP11.96□□□□□ -0.49
NEDD9-203ENST00000397378 LRRC26Q2I0M4 334 aa11.96□□□□□ -0.49
NEDD9-203ENST00000397378 GADL1Q6ZQY3 521 aa11.96□□□□□ -0.49
NEDD9-203ENST00000397378 FAM83AQ86UY5 434 aa11.96□□□□□ -0.49
NEDD9-203ENST00000397378 TDRD7Q8NHU6 1098 aaKnown RBP11.96□□□□□ -0.49
NEDD9-203ENST00000397378 TSR2Q969E8 191 aaKnown RBP11.96□□□□□ -0.49
NEDD9-203ENST00000397378 PRKRIP1Q9H875 184 aaPredicted RBP11.96□□□□□ -0.49
NEDD9-203ENST00000397378 AK9Q5TCS8 1911 aa11.96□□□□□ -0.5
NEDD9-203ENST00000397378 PLIN1O60240 522 aa11.95□□□□□ -0.5
NEDD9-203ENST00000397378 FASTKD5Q7L8L6 764 aaKnown RBP11.95□□□□□ -0.5
NEDD9-203ENST00000397378 ANKRD13CQ8N6S4 541 aa11.95□□□□□ -0.5
NEDD9-203ENST00000397378 TTYH1Q9H313 450 aaPredicted RBP11.95□□□□□ -0.5
NEDD9-203ENST00000397378 RPAP1Q9BWH6 1393 aaPredicted RBP11.94□□□□□ -0.5
NEDD9-203ENST00000397378 CXCL11O14625 94 aa11.94□□□□□ -0.5
NEDD9-203ENST00000397378 UBE4AQ14139 1066 aa11.94□□□□□ -0.5
NEDD9-203ENST00000397378 CCDC27Q2M243 656 aa11.94□□□□□ -0.5
NEDD9-203ENST00000397378 LDHAL6AQ6ZMR3 332 aa11.94□□□□□ -0.5
NEDD9-203ENST00000397378 USP38Q8NB14 1042 aa11.94□□□□□ -0.5
NEDD9-203ENST00000397378 TEKT1Q969V4 418 aa11.94□□□□□ -0.5
NEDD9-203ENST00000397378 PRKAG2Q9UGJ0 569 aa11.94□□□□□ -0.5
NEDD9-203ENST00000397378 CHMP3Q9Y3E7 222 aa11.94□□□□□ -0.5
NEDD9-203ENST00000397378 MAST2Q6P0Q8 1798 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms