RNA–Protein interactions for RNA: ENST00000397036.4

MCF2L-209, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2 BASIC

Gene MCF2L, Length 1,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-209ENST00000397036 RUFY3Q7L099 469 aa16.19■□□□□ 0.18
MCF2L-209ENST00000397036 HSCBQ8IWL3 235 aa16.19■□□□□ 0.18
MCF2L-209ENST00000397036 KLHL34Q8N239 644 aa16.19■□□□□ 0.18
MCF2L-209ENST00000397036 JAKMIP1Q96N16 626 aaKnown RBP16.19■□□□□ 0.18
MCF2L-209ENST00000397036 TTC14Q96N46 770 aa16.19■□□□□ 0.18
MCF2L-209ENST00000397036 NOL10Q9BSC4 688 aaKnown RBP16.19■□□□□ 0.18
MCF2L-209ENST00000397036 NAPBQ9H115 298 aa16.19■□□□□ 0.18
MCF2L-209ENST00000397036 EPB41L4AQ9HCS5 686 aaPredicted RBP16.19■□□□□ 0.18
MCF2L-209ENST00000397036 ANAPC4Q9UJX5 808 aa16.19■□□□□ 0.18
MCF2L-209ENST00000397036 CYP46A1Q9Y6A2 500 aa16.19■□□□□ 0.18
MCF2L-209ENST00000397036 DYNLL1P63167 89 aaKnown RBP16.18■□□□□ 0.18
MCF2L-209ENST00000397036 NEK1Q96PY6 1258 aa16.18■□□□□ 0.18
MCF2L-209ENST00000397036 FHDC1Q9C0D6 1143 aaPredicted RBP16.18■□□□□ 0.18
MCF2L-209ENST00000397036 KCNQ5Q9NR82 932 aa16.18■□□□□ 0.18
MCF2L-209ENST00000397036 AATFQ9NY61 560 aaKnown RBP eCLIP16.18■□□□□ 0.18
MCF2L-209ENST00000397036 DAXXQ9UER7 740 aaPredicted RBP16.18■□□□□ 0.18
MCF2L-209ENST00000397036 MAST2Q6P0Q8 1798 aa16.17■□□□□ 0.18
MCF2L-209ENST00000397036 PRKAB2O43741 272 aa16.17■□□□□ 0.18
MCF2L-209ENST00000397036 CASTP20810 708 aaKnown RBP16.17■□□□□ 0.18
MCF2L-209ENST00000397036 DIXDC1Q155Q3 683 aa16.17■□□□□ 0.18
MCF2L-209ENST00000397036 SBK1Q52WX2 424 aa16.17■□□□□ 0.18
MCF2L-209ENST00000397036 BLOC1S2Q6QNY1 142 aa16.17■□□□□ 0.18
MCF2L-209ENST00000397036 NIM1KQ8IY84 436 aa16.17■□□□□ 0.18
MCF2L-209ENST00000397036 FBXL16Q8N461 479 aa16.17■□□□□ 0.18
MCF2L-209ENST00000397036 MKRN1Q9UHC7 482 aaKnown RBP16.17■□□□□ 0.18
MCF2L-209ENST00000397036 TTF2Q9UNY4 1162 aaKnown RBP16.17■□□□□ 0.18
MCF2L-209ENST00000397036 CCDC88AQ3V6T2 1871 aa16.17■□□□□ 0.18
MCF2L-209ENST00000397036 E7EWF7 191 aa16.16■□□□□ 0.18
MCF2L-209ENST00000397036 K7ELQ4 463 aaPredicted RBP16.16■□□□□ 0.18
MCF2L-209ENST00000397036 PCP11498 1178 aaKnown RBP16.16■□□□□ 0.18
MCF2L-209ENST00000397036 NT5C2P49902 561 aa16.16■□□□□ 0.18
MCF2L-209ENST00000397036 GMLQ99445 158 aa16.16■□□□□ 0.18
MCF2L-209ENST00000397036 SYT17Q9BSW7 474 aa16.16■□□□□ 0.18
MCF2L-209ENST00000397036 UPF3BQ9BZI7 483 aaKnown RBP16.16■□□□□ 0.18
MCF2L-209ENST00000397036 SERPINA10Q9UK55 444 aa16.16■□□□□ 0.18
MCF2L-209ENST00000397036 DAGLAQ9Y4D2 1042 aa16.16■□□□□ 0.18
MCF2L-209ENST00000397036 TAF6LQ9Y6J9 622 aa16.16■□□□□ 0.18
MCF2L-209ENST00000397036 CD2BP2O95400 341 aaKnown RBP16.15■□□□□ 0.18
MCF2L-209ENST00000397036 RPS6KB1P23443 525 aa16.15■□□□□ 0.18
MCF2L-209ENST00000397036 BTDP43251 543 aa16.15■□□□□ 0.18
MCF2L-209ENST00000397036 TDO2P48775 406 aa16.15■□□□□ 0.18
MCF2L-209ENST00000397036 RSBN1LQ6PCB5 846 aaPredicted RBP16.15■□□□□ 0.18
MCF2L-209ENST00000397036 DHX32Q7L7V1 743 aaKnown RBP16.15■□□□□ 0.18
MCF2L-209ENST00000397036 JDP2Q8WYK2 163 aa16.15■□□□□ 0.18
MCF2L-209ENST00000397036 TEKT1Q969V4 418 aa16.15■□□□□ 0.18
MCF2L-209ENST00000397036 ZDHHC15Q96MV8 337 aa16.15■□□□□ 0.18
MCF2L-209ENST00000397036 DCP1AQ9NPI6 582 aaPredicted RBP16.15■□□□□ 0.18
MCF2L-209ENST00000397036 FER1L6Q2WGJ9 1857 aa16.15■□□□□ 0.18
MCF2L-209ENST00000397036 WDR19Q8NEZ3 1342 aa16.15■□□□□ 0.18
MCF2L-209ENST00000397036 RHBDL3P58872 404 aa16.14■□□□□ 0.18
MCF2L-209ENST00000397036 ANKRD1Q15327 319 aa16.14■□□□□ 0.18
MCF2L-209ENST00000397036 STOX1Q6ZVD7 989 aa16.14■□□□□ 0.18
MCF2L-209ENST00000397036 AGBL3Q8NEM8 1001 aa16.14■□□□□ 0.18
MCF2L-209ENST00000397036 FBXW7Q969H0 707 aa16.14■□□□□ 0.18
MCF2L-209ENST00000397036 PDRG1Q9NUG6 133 aa16.14■□□□□ 0.18
MCF2L-209ENST00000397036 FGRP09769 529 aa16.14■□□□□ 0.17
MCF2L-209ENST00000397036 EXOSC10Q01780 885 aaKnown RBP16.14■□□□□ 0.17
MCF2L-209ENST00000397036 SDR42E1Q8WUS8 393 aa16.14■□□□□ 0.17
MCF2L-209ENST00000397036 STAG1Q8WVM7 1258 aa16.14■□□□□ 0.17
MCF2L-209ENST00000397036 AGXT2Q9BYV1 514 aa16.14■□□□□ 0.17
MCF2L-209ENST00000397036 NPM3O75607 178 aaKnown RBP16.13■□□□□ 0.17
MCF2L-209ENST00000397036 TRDNQ13061 729 aa16.13■□□□□ 0.17
MCF2L-209ENST00000397036 TNIP1Q15025 636 aa16.13■□□□□ 0.17
MCF2L-209ENST00000397036 AKNAD1Q5T1N1 836 aa16.13■□□□□ 0.17
MCF2L-209ENST00000397036 APOBEC3HQ6NTF7 200 aaKnown RBP16.13■□□□□ 0.17
MCF2L-209ENST00000397036 CTR9Q6PD62 1173 aa16.13■□□□□ 0.17
MCF2L-209ENST00000397036 NCOA7Q8NI08 942 aa16.13■□□□□ 0.17
MCF2L-209ENST00000397036 SH3RF3Q8TEJ3 882 aaPredicted RBP16.13■□□□□ 0.17
MCF2L-209ENST00000397036 MTA3Q9BTC8 594 aa16.13■□□□□ 0.17
MCF2L-209ENST00000397036 MXD3Q9BW11 206 aa16.13■□□□□ 0.17
MCF2L-209ENST00000397036 NBPF3Q9H094 633 aa16.13■□□□□ 0.17
MCF2L-209ENST00000397036 RNF41Q9H4P4 317 aaPredicted RBP16.13■□□□□ 0.17
MCF2L-209ENST00000397036 CNNM2Q9H8M5 875 aa16.13■□□□□ 0.17
MCF2L-209ENST00000397036 ARPP21Q9UBL0 812 aaPredicted RBP16.13■□□□□ 0.17
MCF2L-209ENST00000397036 SCN9AQ15858 1988 aa16.13■□□□□ 0.17
MCF2L-209ENST00000397036 ARFGEF1Q9Y6D6 1849 aa16.13■□□□□ 0.17
MCF2L-209ENST00000397036 FZD9O00144 591 aa16.12■□□□□ 0.17
MCF2L-209ENST00000397036 PSMD14O00487 310 aa16.12■□□□□ 0.17
MCF2L-209ENST00000397036 CRKP46108 304 aa16.12■□□□□ 0.17
MCF2L-209ENST00000397036 HAND2P61296 217 aa16.12■□□□□ 0.17
MCF2L-209ENST00000397036 CXCL9Q07325 125 aa16.12■□□□□ 0.17
MCF2L-209ENST00000397036 PPARAQ07869 468 aa16.12■□□□□ 0.17
MCF2L-209ENST00000397036 ZSCAN31Q96LW9 406 aaPredicted RBP16.12■□□□□ 0.17
MCF2L-209ENST00000397036 LIMCH1Q9UPQ0 1083 aa16.12■□□□□ 0.17
MCF2L-209ENST00000397036 USP17L12C9JPN9 530 aa16.11■□□□□ 0.17
MCF2L-209ENST00000397036 USP17L21D6R901 530 aa16.11■□□□□ 0.17
MCF2L-209ENST00000397036 RPS12P25398 132 aaKnown RBP16.11■□□□□ 0.17
MCF2L-209ENST00000397036 MCM5P33992 734 aa16.11■□□□□ 0.17
MCF2L-209ENST00000397036 USP5P45974 858 aa16.11■□□□□ 0.17
MCF2L-209ENST00000397036 CIAPIN1Q6FI81 312 aa16.11■□□□□ 0.17
MCF2L-209ENST00000397036 KIAA0825Q8IV33 1275 aa16.11■□□□□ 0.17
MCF2L-209ENST00000397036 MB21D2Q8IYB1 491 aaPredicted RBP16.11■□□□□ 0.17
MCF2L-209ENST00000397036 TEX11Q8IYF3 940 aa16.11■□□□□ 0.17
MCF2L-209ENST00000397036 MTMR14Q8NCE2 650 aa16.11■□□□□ 0.17
MCF2L-209ENST00000397036 KRT23Q9C075 422 aa16.11■□□□□ 0.17
MCF2L-209ENST00000397036 TAOK2Q9UL54 1235 aa16.11■□□□□ 0.17
MCF2L-209ENST00000397036 MYH2Q9UKX2 1941 aa16.11■□□□□ 0.17
MCF2L-209ENST00000397036 COL4A5P29400 1685 aa16.11■□□□□ 0.17
MCF2L-209ENST00000397036 F8W031 263 aaPredicted RBP16.1■□□□□ 0.17
MCF2L-209ENST00000397036 RAD17O75943 681 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms