RNA–Protein interactions for RNA: ENST00000397004.8

NUP98-204, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-204ENST00000397004 KCNJ6P48051 423 aa16.12■□□□□ 0.17
NUP98-204ENST00000397004 UTP14AQ9BVJ6 771 aaKnown RBP16.12■□□□□ 0.17
NUP98-204ENST00000397004 SASH3O75995 380 aa16.12■□□□□ 0.17
NUP98-204ENST00000397004 SEC31AO94979 1220 aaKnown RBP16.12■□□□□ 0.17
NUP98-204ENST00000397004 PNMA6AP0CW24 399 aaPredicted RBP16.12■□□□□ 0.17
NUP98-204ENST00000397004 NTRK3Q16288 839 aa16.12■□□□□ 0.17
NUP98-204ENST00000397004 MYL10Q9BUA6 226 aa16.12■□□□□ 0.17
NUP98-204ENST00000397004 GPAA1O43292 621 aa16.12■□□□□ 0.17
NUP98-204ENST00000397004 WDR24Q96S15 920 aa16.12■□□□□ 0.17
NUP98-204ENST00000397004 KCPQ6ZWJ8 1503 aa16.11■□□□□ 0.17
NUP98-204ENST00000397004 IKBKBO14920 756 aa16.11■□□□□ 0.17
NUP98-204ENST00000397004 CIAO1O76071 339 aa16.11■□□□□ 0.17
NUP98-204ENST00000397004 MCAMP43121 646 aa16.11■□□□□ 0.17
NUP98-204ENST00000397004 MDM2Q00987 491 aaPredicted RBP16.11■□□□□ 0.17
NUP98-204ENST00000397004 BRAPQ7Z569 592 aa16.11■□□□□ 0.17
NUP98-204ENST00000397004 CPDO75976 1380 aa16.11■□□□□ 0.17
NUP98-204ENST00000397004 A0A0U1RQJ8 604 aa16.11■□□□□ 0.17
NUP98-204ENST00000397004 ATRIPQ8WXE1 791 aa16.11■□□□□ 0.17
NUP98-204ENST00000397004 IMMTQ16891 758 aaKnown RBP16.11■□□□□ 0.17
NUP98-204ENST00000397004 KRT40Q6A162 431 aa16.11■□□□□ 0.17
NUP98-204ENST00000397004 FMR1Q06787 632 aaKnown RBP eCLIP16.1■□□□□ 0.177e-8■■■□□ 17.9
NUP98-204ENST00000397004 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.1■□□□□ 0.17
NUP98-204ENST00000397004 TADA3O75528 432 aa16.1■□□□□ 0.17
NUP98-204ENST00000397004 ATF3P18847 181 aa16.1■□□□□ 0.17
NUP98-204ENST00000397004 SYKP43405 635 aa16.1■□□□□ 0.17
NUP98-204ENST00000397004 UBASH3AP57075 661 aa16.1■□□□□ 0.17
NUP98-204ENST00000397004 VSTM4Q8IW00 320 aa16.1■□□□□ 0.17
NUP98-204ENST00000397004 PCDHA5Q9Y5H7 936 aa16.1■□□□□ 0.17
NUP98-204ENST00000397004 ABCA3Q99758 1704 aa16.1■□□□□ 0.17
NUP98-204ENST00000397004 FAM237AA0A1B0GTK4 181 aa16.1■□□□□ 0.17
NUP98-204ENST00000397004 GUCY1A2P33402 732 aa16.1■□□□□ 0.17
NUP98-204ENST00000397004 UBR2Q8IWV8 1755 aa16.1■□□□□ 0.17
NUP98-204ENST00000397004 RIC1Q4ADV7 1423 aa16.09■□□□□ 0.17
NUP98-204ENST00000397004 ERICH4A6NGS2 130 aa16.09■□□□□ 0.17
NUP98-204ENST00000397004 FAM89AQ96GI7 184 aa16.09■□□□□ 0.17
NUP98-204ENST00000397004 TOB1P50616 345 aaPredicted RBP16.09■□□□□ 0.17
NUP98-204ENST00000397004 RESP18Q5W5W9 173 aa16.09■□□□□ 0.17
NUP98-204ENST00000397004 CADPS2Q86UW7 1296 aa16.09■□□□□ 0.17
NUP98-204ENST00000397004 STK11IPQ8N1F8 1099 aa16.09■□□□□ 0.17
NUP98-204ENST00000397004 NCOA7Q8NI08 942 aa16.09■□□□□ 0.17
NUP98-204ENST00000397004 APPBP2Q92624 585 aa16.09■□□□□ 0.17
NUP98-204ENST00000397004 ALG1Q9BT22 464 aa16.09■□□□□ 0.17
NUP98-204ENST00000397004 PRR29P0C7W0 189 aa16.09■□□□□ 0.17
NUP98-204ENST00000397004 TOGARAM2Q6ZUX3 1019 aa16.09■□□□□ 0.17
NUP98-204ENST00000397004 CARD6Q9BX69 1037 aa16.09■□□□□ 0.17
NUP98-204ENST00000397004 TBX2Q13207 712 aaPredicted RBP16.08■□□□□ 0.17
NUP98-204ENST00000397004 SYNE3Q6ZMZ3 975 aa16.08■□□□□ 0.17
NUP98-204ENST00000397004 CCDC191Q8NCU4 936 aa16.08■□□□□ 0.17
NUP98-204ENST00000397004 ZCCHC17Q9NP64 241 aaKnown RBP16.08■□□□□ 0.17
NUP98-204ENST00000397004 TNS3Q68CZ2 1445 aa16.08■□□□□ 0.16
NUP98-204ENST00000397004 ZNF827Q17R98 1081 aa16.08■□□□□ 0.16
NUP98-204ENST00000397004 GRAMD1CQ8IYS0 662 aa16.08■□□□□ 0.16
NUP98-204ENST00000397004 FAM177A1Q8N128 213 aaPredicted RBP16.08■□□□□ 0.16
NUP98-204ENST00000397004 IGDCC4Q8TDY8 1250 aa16.08■□□□□ 0.16
NUP98-204ENST00000397004 SH2B2O14492 632 aaPredicted RBP16.08■□□□□ 0.16
NUP98-204ENST00000397004 CSB-PGBD3P0DP91 1061 aa16.08■□□□□ 0.16
NUP98-204ENST00000397004 TTC39AQ5SRH9 613 aa16.08■□□□□ 0.16
NUP98-204ENST00000397004 APOA5Q6Q788 366 aa16.08■□□□□ 0.16
NUP98-204ENST00000397004 UBXN6Q9BZV1 441 aa16.08■□□□□ 0.16
NUP98-204ENST00000397004 PIH1D3Q9NQM4 214 aaKnown RBP16.08■□□□□ 0.16
NUP98-204ENST00000397004 CEP126Q9P2H0 1117 aa16.08■□□□□ 0.16
NUP98-204ENST00000397004 UBN2Q6ZU65 1347 aa16.08■□□□□ 0.16
NUP98-204ENST00000397004 PHLPP2Q6ZVD8 1323 aa16.08■□□□□ 0.16
NUP98-204ENST00000397004 NHSL1Q5SYE7 1610 aa16.08■□□□□ 0.16
NUP98-204ENST00000397004 MYH7P12883 1935 aa16.07■□□□□ 0.16
NUP98-204ENST00000397004 KIF2AO00139 706 aaPredicted RBP16.07■□□□□ 0.16
NUP98-204ENST00000397004 ZNF213O14771 459 aa16.07■□□□□ 0.16
NUP98-204ENST00000397004 MYL5Q02045 173 aa16.07■□□□□ 0.16
NUP98-204ENST00000397004 TIGD1Q96MW7 591 aa16.07■□□□□ 0.16
NUP98-204ENST00000397004 ISCA1Q9BUE6 129 aa16.07■□□□□ 0.16
NUP98-204ENST00000397004 IRX2Q9BZI1 471 aaPredicted RBP16.07■□□□□ 0.16
NUP98-204ENST00000397004 ZMYM6O95789 1325 aa16.07■□□□□ 0.16
NUP98-204ENST00000397004 B4E1Z4 1266 aa16.07■□□□□ 0.16
NUP98-204ENST00000397004 CPLX1O14810 134 aa16.07■□□□□ 0.16
NUP98-204ENST00000397004 HOMER1Q86YM7 354 aa16.07■□□□□ 0.16
NUP98-204ENST00000397004 SHISA4Q96DD7 197 aa16.07■□□□□ 0.16
NUP98-204ENST00000397004 ATG3Q9NT62 314 aa16.07■□□□□ 0.16
NUP98-204ENST00000397004 ZNF335Q9H4Z2 1342 aaPredicted RBP16.07■□□□□ 0.16
NUP98-204ENST00000397004 MTF1Q14872 753 aa16.07■□□□□ 0.16
NUP98-204ENST00000397004 USP49Q70CQ1 688 aa16.07■□□□□ 0.16
NUP98-204ENST00000397004 TC2NQ8N9U0 490 aa16.07■□□□□ 0.16
NUP98-204ENST00000397004 ADKP55263 362 aaKnown RBP16.06■□□□□ 0.16
NUP98-204ENST00000397004 CFAP100Q494V2 611 aa16.06■□□□□ 0.16
NUP98-204ENST00000397004 MICU3Q86XE3 530 aa16.06■□□□□ 0.16
NUP98-204ENST00000397004 TICAM2Q86XR7 235 aa16.06■□□□□ 0.16
NUP98-204ENST00000397004 KIFC2Q96AC6 838 aa16.06■□□□□ 0.16
NUP98-204ENST00000397004 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.06■□□□□ 0.16
NUP98-204ENST00000397004 ANGEL1Q9UNK9 670 aaKnown RBP16.06■□□□□ 0.16
NUP98-204ENST00000397004 PPP6R2O75170 966 aa16.06■□□□□ 0.16
NUP98-204ENST00000397004 KRBA2Q6ZNG9 492 aa16.06■□□□□ 0.16
NUP98-204ENST00000397004 TRMT44Q8IYL2 757 aaKnown RBP16.06■□□□□ 0.16
NUP98-204ENST00000397004 PPP2R2CQ9Y2T4 447 aa16.06■□□□□ 0.16
NUP98-204ENST00000397004 URI1O94763 535 aaPredicted RBP16.05■□□□□ 0.16
NUP98-204ENST00000397004 TBC1D8O95759 1140 aa16.05■□□□□ 0.16
NUP98-204ENST00000397004 SERPINC1P01008 464 aa16.05■□□□□ 0.16
NUP98-204ENST00000397004 ZNF18P17022 549 aa16.05■□□□□ 0.16
NUP98-204ENST00000397004 CYP2C19P33261 490 aa16.05■□□□□ 0.16
NUP98-204ENST00000397004 ADD2P35612 726 aa16.05■□□□□ 0.16
NUP98-204ENST00000397004 TEX13AQ9BXU3 409 aaPredicted RBP16.05■□□□□ 0.16
NUP98-204ENST00000397004 LY9Q9HBG7 655 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms