RNA–Protein interactions for RNA: ENST00000396355.5

NDE1-202, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,936 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-202ENST00000396355 INF2Q27J81 1249 aa9.62□□□□□ -0.87
NDE1-202ENST00000396355 PPP1R12CQ9BZL4 782 aa9.62□□□□□ -0.87
NDE1-202ENST00000396355 USP44Q9H0E7 712 aa9.62□□□□□ -0.87
NDE1-202ENST00000396355 MED4Q9NPJ6 270 aa9.62□□□□□ -0.87
NDE1-202ENST00000396355 KDM3BQ7LBC6 1761 aa9.62□□□□□ -0.87
NDE1-202ENST00000396355 MAP3K5Q99683 1374 aa9.62□□□□□ -0.87
NDE1-202ENST00000396355 TATP17735 454 aaPredicted RBP9.62□□□□□ -0.87
NDE1-202ENST00000396355 NBPF20Q3BBV1 942 aa9.62□□□□□ -0.87
NDE1-202ENST00000396355 UTP14AQ9BVJ6 771 aaKnown RBP9.62□□□□□ -0.87
NDE1-202ENST00000396355 EP400Q96L91 3159 aa9.61□□□□□ -0.87
NDE1-202ENST00000396355 HDXQ7Z353 690 aa9.61□□□□□ -0.87
NDE1-202ENST00000396355 CEP57L1Q8IYX8 460 aa9.61□□□□□ -0.87
NDE1-202ENST00000396355 ACRBPQ8NEB7 543 aa9.61□□□□□ -0.87
NDE1-202ENST00000396355 CABS1Q96KC9 395 aa9.61□□□□□ -0.87
NDE1-202ENST00000396355 C1QTNF8P60827 252 aa9.61□□□□□ -0.87
NDE1-202ENST00000396355 ZKSCAN8Q15776 578 aaPredicted RBP9.61□□□□□ -0.87
NDE1-202ENST00000396355 IQCA1Q86XH1 822 aa9.61□□□□□ -0.87
NDE1-202ENST00000396355 KCNF1Q9H3M0 494 aa9.61□□□□□ -0.87
NDE1-202ENST00000396355 FAM204AQ9H8W3 233 aa9.61□□□□□ -0.87
NDE1-202ENST00000396355 RMI1Q9H9A7 625 aa9.61□□□□□ -0.87
NDE1-202ENST00000396355 SPTLC3Q9NUV7 552 aa9.61□□□□□ -0.87
NDE1-202ENST00000396355 NFAT5O94916 1531 aa9.61□□□□□ -0.87
NDE1-202ENST00000396355 PXDNLA1KZ92 1463 aa9.61□□□□□ -0.87
NDE1-202ENST00000396355 WDHD1O75717 1129 aaPredicted RBP9.61□□□□□ -0.87
NDE1-202ENST00000396355 CAPN15O75808 1086 aa9.61□□□□□ -0.87
NDE1-202ENST00000396355 MATR3P43243 847 aaKnown RBP eCLIP9.61□□□□□ -0.871e-9■■■■■ 34.8
NDE1-202ENST00000396355 ME1P48163 572 aa9.61□□□□□ -0.87
NDE1-202ENST00000396355 ZNF75DP51815 510 aa9.61□□□□□ -0.87
NDE1-202ENST00000396355 SAAL1Q96ER3 474 aa9.61□□□□□ -0.87
NDE1-202ENST00000396355 CBX8Q9HC52 389 aa9.61□□□□□ -0.87
NDE1-202ENST00000396355 CTIFO43310 598 aaKnown RBP9.6□□□□□ -0.87
NDE1-202ENST00000396355 NEMFO60524 1076 aa9.6□□□□□ -0.87
NDE1-202ENST00000396355 TRIM68Q6AZZ1 485 aa9.6□□□□□ -0.87
NDE1-202ENST00000396355 TAX1BP1Q86VP1 789 aa9.6□□□□□ -0.87
NDE1-202ENST00000396355 ZCRB1Q8TBF4 217 aaKnown RBP9.6□□□□□ -0.87
NDE1-202ENST00000396355 GOLGA1Q92805 767 aa9.6□□□□□ -0.87
NDE1-202ENST00000396355 EXOC4Q96A65 974 aa9.6□□□□□ -0.87
NDE1-202ENST00000396355 SH3GL3Q99963 347 aa9.6□□□□□ -0.87
NDE1-202ENST00000396355 ESYT1Q9BSJ8 1104 aa9.6□□□□□ -0.87
NDE1-202ENST00000396355 CD248Q9HCU0 757 aa9.6□□□□□ -0.87
NDE1-202ENST00000396355 LZTFL1Q9NQ48 299 aa9.6□□□□□ -0.87
NDE1-202ENST00000396355 A0A087WWV3 80 aa9.6□□□□□ -0.87
NDE1-202ENST00000396355 HGSO14964 777 aaPredicted RBP9.6□□□□□ -0.87
NDE1-202ENST00000396355 CAVIN2O95810 425 aa9.6□□□□□ -0.87
NDE1-202ENST00000396355 HMGB2P26583 209 aaKnown RBP9.6□□□□□ -0.87
NDE1-202ENST00000396355 TRIM4Q9C037 500 aa9.6□□□□□ -0.87
NDE1-202ENST00000396355 RIPOR2Q9Y4F9 1068 aa9.6□□□□□ -0.87
NDE1-202ENST00000396355 STX6O43752 255 aa9.6□□□□□ -0.87
NDE1-202ENST00000396355 SMIM24O75264 130 aa9.6□□□□□ -0.87
NDE1-202ENST00000396355 ATP8B2P98198 1209 aa9.6□□□□□ -0.87
NDE1-202ENST00000396355 CEMIPQ8WUJ3 1361 aa9.59□□□□□ -0.87
NDE1-202ENST00000396355 GLI3P10071 1580 aa9.59□□□□□ -0.87
NDE1-202ENST00000396355 GOLGA6L10A0A0M3HER8 536 aa9.59□□□□□ -0.87
NDE1-202ENST00000396355 SEPT14Q6ZU15 432 aa9.59□□□□□ -0.87
NDE1-202ENST00000396355 CCDC121Q6ZUS5 278 aa9.59□□□□□ -0.87
NDE1-202ENST00000396355 ARHGEF25Q86VW2 580 aa9.59□□□□□ -0.87
NDE1-202ENST00000396355 POTEDQ86YR6 584 aa9.59□□□□□ -0.87
NDE1-202ENST00000396355 CEP112Q8N8E3 955 aa9.59□□□□□ -0.87
NDE1-202ENST00000396355 IL1RAPL2Q9NP60 686 aa9.59□□□□□ -0.87
NDE1-202ENST00000396355 CRYBG1Q9Y4K1 1723 aa9.59□□□□□ -0.87
NDE1-202ENST00000396355 TCHHQ07283 1943 aa9.59□□□□□ -0.87
NDE1-202ENST00000396355 hCG_2014768A0A024R1R8 64 aa9.59□□□□□ -0.87
NDE1-202ENST00000396355 ZSCAN12O43309 604 aa9.59□□□□□ -0.87
NDE1-202ENST00000396355 CHMLP26374 656 aa9.59□□□□□ -0.87
NDE1-202ENST00000396355 CNGA1P29973 690 aa9.59□□□□□ -0.87
NDE1-202ENST00000396355 HNRNPH1P31943 449 aaKnown RBP9.59□□□□□ -0.87
NDE1-202ENST00000396355 PLA2G4AP47712 749 aa9.59□□□□□ -0.87
NDE1-202ENST00000396355 SPECC1Q5M775 1068 aa9.59□□□□□ -0.87
NDE1-202ENST00000396355 AOPEPQ8N6M6 819 aa9.59□□□□□ -0.87
NDE1-202ENST00000396355 HOOK1Q9UJC3 728 aaKnown RBP9.59□□□□□ -0.87
NDE1-202ENST00000396355 RAD50Q92878 1312 aa9.59□□□□□ -0.87
NDE1-202ENST00000396355 SYT1P21579 422 aa9.59□□□□□ -0.87
NDE1-202ENST00000396355 DNA2P51530 1060 aa9.59□□□□□ -0.87
NDE1-202ENST00000396355 IRX1P78414 480 aaPredicted RBP9.59□□□□□ -0.87
NDE1-202ENST00000396355 SNX1Q13596 522 aa9.59□□□□□ -0.87
NDE1-202ENST00000396355 DZIP1Q86YF9 867 aaKnown RBP9.59□□□□□ -0.87
NDE1-202ENST00000396355 FAM76AQ8TAV0 307 aa9.59□□□□□ -0.87
NDE1-202ENST00000396355 KCNQ3O43525 872 aa9.58□□□□□ -0.88
NDE1-202ENST00000396355 PTPN21Q16825 1174 aa9.58□□□□□ -0.88
NDE1-202ENST00000396355 LONRF2Q1L5Z9 754 aa9.58□□□□□ -0.88
NDE1-202ENST00000396355 SRCIN1Q9C0H9 1055 aa9.58□□□□□ -0.88
NDE1-202ENST00000396355 LGR6Q9HBX8 967 aa9.58□□□□□ -0.88
NDE1-202ENST00000396355 ZNF446Q9NWS9 450 aa9.58□□□□□ -0.88
NDE1-202ENST00000396355 CFAP45Q9UL16 551 aa9.58□□□□□ -0.88
NDE1-202ENST00000396355 NBPF7P0C2Y1 421 aaPredicted RBP9.58□□□□□ -0.88
NDE1-202ENST00000396355 LMOD1P29536 600 aaPredicted RBP9.58□□□□□ -0.88
NDE1-202ENST00000396355 TEX11Q8IYF3 940 aa9.58□□□□□ -0.88
NDE1-202ENST00000396355 SOS1Q07889 1333 aaPredicted RBP9.58□□□□□ -0.88
NDE1-202ENST00000396355 LMO7Q8WWI1 1683 aa9.58□□□□□ -0.88
NDE1-202ENST00000396355 TTC36A6NLP5 189 aa9.58□□□□□ -0.88
NDE1-202ENST00000396355 ANXA1P04083 346 aa9.58□□□□□ -0.88
NDE1-202ENST00000396355 TAF7Q15545 349 aaPredicted RBP9.58□□□□□ -0.88
NDE1-202ENST00000396355 NBPF9Q3BBW0 867 aa9.58□□□□□ -0.88
NDE1-202ENST00000396355 TMX4Q9H1E5 349 aaPredicted RBP9.58□□□□□ -0.88
NDE1-202ENST00000396355 STAP2Q9UGK3 403 aa9.58□□□□□ -0.88
NDE1-202ENST00000396355 FAM169AQ9Y6X4 670 aa9.58□□□□□ -0.88
NDE1-202ENST00000396355 GNAI3P08754 354 aa9.57□□□□□ -0.88
NDE1-202ENST00000396355 TOP1P11387 765 aaKnown RBP9.57□□□□□ -0.88
NDE1-202ENST00000396355 LRRC23Q53EV4 343 aaPredicted RBP9.57□□□□□ -0.88
NDE1-202ENST00000396355 HDGFL1Q5TGJ6 251 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 648.8 ms