RNA–Protein interactions for RNA: ENST00000395859.2

VCPKMT-201, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best) BASIC

Gene VCPKMT, Length 795 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-201ENST00000395859 C7orf61Q8IZ16 206 aa17.61■□□□□ 0.41
VCPKMT-201ENST00000395859 PI4KAP1Q8N8J0 262 aa17.61■□□□□ 0.41
VCPKMT-201ENST00000395859 TDRD7Q8NHU6 1098 aaKnown RBP17.61■□□□□ 0.41
VCPKMT-201ENST00000395859 CRKP46108 304 aa17.6■□□□□ 0.41
VCPKMT-201ENST00000395859 MFSD14BQ5SR56 506 aa17.6■□□□□ 0.41
VCPKMT-201ENST00000395859 ANKLE1Q8NAG6 615 aa17.6■□□□□ 0.41
VCPKMT-201ENST00000395859 DOCK3Q8IZD9 2030 aa17.6■□□□□ 0.41
VCPKMT-201ENST00000395859 RPAP1Q9BWH6 1393 aaPredicted RBP17.59■□□□□ 0.41
VCPKMT-201ENST00000395859 GRIK5Q16478 980 aa17.59■□□□□ 0.41
VCPKMT-201ENST00000395859 FAM83AQ86UY5 434 aa17.59■□□□□ 0.41
VCPKMT-201ENST00000395859 INPP5BP32019 993 aa17.58■□□□□ 0.4
VCPKMT-201ENST00000395859 CCDC146Q8IYE0 955 aa17.58■□□□□ 0.4
VCPKMT-201ENST00000395859 PARK7Q99497 189 aaKnown RBP17.58■□□□□ 0.4
VCPKMT-201ENST00000395859 ZNF112Q9UJU3 913 aa17.58■□□□□ 0.4
VCPKMT-201ENST00000395859 CYP2C8P10632 490 aa17.57■□□□□ 0.4
VCPKMT-201ENST00000395859 SYN1P17600 705 aa17.57■□□□□ 0.4
VCPKMT-201ENST00000395859 CACNB3P54284 484 aa17.57■□□□□ 0.4
VCPKMT-201ENST00000395859 FKBP1CQ5VVH2 108 aa17.57■□□□□ 0.4
VCPKMT-201ENST00000395859 C8orf58Q8NAV2 365 aa17.57■□□□□ 0.4
VCPKMT-201ENST00000395859 ELL2O00472 640 aaPredicted RBP17.56■□□□□ 0.4
VCPKMT-201ENST00000395859 HDLBPQ00341 1268 aaKnown RBP17.56■□□□□ 0.4
VCPKMT-201ENST00000395859 GCKRQ14397 625 aa17.56■□□□□ 0.4
VCPKMT-201ENST00000395859 DDX60LQ5H9U9 1706 aaKnown RBP17.55■□□□□ 0.4
VCPKMT-201ENST00000395859 PIAS4Q8N2W9 510 aaPredicted RBP17.55■□□□□ 0.4
VCPKMT-201ENST00000395859 UBE2OQ9C0C9 1292 aaKnown RBP17.55■□□□□ 0.4
VCPKMT-201ENST00000395859 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.55■□□□□ 0.4
VCPKMT-201ENST00000395859 ANKRD18BA2A2Z9 1011 aa17.54■□□□□ 0.4
VCPKMT-201ENST00000395859 NEXNQ0ZGT2 675 aa17.54■□□□□ 0.4
VCPKMT-201ENST00000395859 NOL9Q5SY16 702 aaKnown RBP17.54■□□□□ 0.4
VCPKMT-201ENST00000395859 APOBEC3HQ6NTF7 200 aaKnown RBP17.54■□□□□ 0.4
VCPKMT-201ENST00000395859 RUNDC1Q96C34 613 aa17.54■□□□□ 0.4
VCPKMT-201ENST00000395859 ZNF341Q9BYN7 854 aa17.54■□□□□ 0.4
VCPKMT-201ENST00000395859 NBPF3Q9H094 633 aa17.54■□□□□ 0.4
VCPKMT-201ENST00000395859 IFT57Q9NWB7 429 aa17.54■□□□□ 0.4
VCPKMT-201ENST00000395859 CCDC30Q5VVM6 783 aa17.53■□□□□ 0.4
VCPKMT-201ENST00000395859 DCAF15Q66K64 600 aa17.53■□□□□ 0.4
VCPKMT-201ENST00000395859 HOOK2Q96ED9 719 aa17.53■□□□□ 0.4
VCPKMT-201ENST00000395859 FAM84BQ96KN1 310 aaPredicted RBP17.53■□□□□ 0.4
VCPKMT-201ENST00000395859 MRIQ9BWK5 157 aa17.53■□□□□ 0.4
VCPKMT-201ENST00000395859 PFASO15067 1338 aa17.52■□□□□ 0.4
VCPKMT-201ENST00000395859 CXCL11O14625 94 aa17.52■□□□□ 0.4
VCPKMT-201ENST00000395859 COL9A1P20849 921 aa17.52■□□□□ 0.4
VCPKMT-201ENST00000395859 FOXO4P98177 505 aa17.52■□□□□ 0.4
VCPKMT-201ENST00000395859 MIGA2Q7L4E1 593 aa17.52■□□□□ 0.4
VCPKMT-201ENST00000395859 ZDHHC15Q96MV8 337 aa17.52■□□□□ 0.4
VCPKMT-201ENST00000395859 OGDHLQ9ULD0 1010 aa17.52■□□□□ 0.4
VCPKMT-201ENST00000395859 TSPYL6Q8N831 410 aa17.51■□□□□ 0.39
VCPKMT-201ENST00000395859 CCER1Q8TC90 406 aaPredicted RBP17.51■□□□□ 0.39
VCPKMT-201ENST00000395859 C11orf49Q9H6J7 331 aa17.51■□□□□ 0.39
VCPKMT-201ENST00000395859 SLC45A1Q9Y2W3 748 aa17.51■□□□□ 0.39
VCPKMT-201ENST00000395859 A0A0G2JLL6 359 aaPredicted RBP17.5■□□□□ 0.39
VCPKMT-201ENST00000395859 TNPO2O14787 897 aaKnown RBP17.5■□□□□ 0.39
VCPKMT-201ENST00000395859 HIBADHP31937 336 aaKnown RBP17.5■□□□□ 0.39
VCPKMT-201ENST00000395859 GYG1P46976 350 aa17.5■□□□□ 0.39
VCPKMT-201ENST00000395859 G2E3Q7L622 706 aa17.5■□□□□ 0.39
VCPKMT-201ENST00000395859 PRRT2Q7Z6L0 340 aaPredicted RBP17.5■□□□□ 0.39
VCPKMT-201ENST00000395859 PTPRFP10586 1907 aa17.5■□□□□ 0.39
VCPKMT-201ENST00000395859 COL6A1P12109 1028 aa17.49■□□□□ 0.39
VCPKMT-201ENST00000395859 GNAI1P63096 354 aa17.49■□□□□ 0.39
VCPKMT-201ENST00000395859 IFIT5Q13325 482 aaKnown RBP17.49■□□□□ 0.39
VCPKMT-201ENST00000395859 UBE4AQ14139 1066 aa17.49■□□□□ 0.39
VCPKMT-201ENST00000395859 TEKT1Q969V4 418 aa17.49■□□□□ 0.39
VCPKMT-201ENST00000395859 FBXO33Q7Z6M2 555 aa17.48■□□□□ 0.39
VCPKMT-201ENST00000395859 CDX2Q99626 313 aaPredicted RBP17.48■□□□□ 0.39
VCPKMT-201ENST00000395859 CHMP4AQ9BY43 222 aa17.48■□□□□ 0.39
VCPKMT-201ENST00000395859 HMGCRP04035 888 aa17.47■□□□□ 0.39
VCPKMT-201ENST00000395859 TRIM32Q13049 653 aa17.47■□□□□ 0.39
VCPKMT-201ENST00000395859 FAM151AQ8WW52 585 aa17.47■□□□□ 0.39
VCPKMT-201ENST00000395859 ZNF594Q96JF6 807 aaPredicted RBP17.47■□□□□ 0.39
VCPKMT-201ENST00000395859 FAM161BQ96MY7 647 aa17.47■□□□□ 0.39
VCPKMT-201ENST00000395859 GJD2Q9UKL4 321 aa17.47■□□□□ 0.39
VCPKMT-201ENST00000395859 ATRNL1Q5VV63 1379 aa17.47■□□□□ 0.39
VCPKMT-201ENST00000395859 NCOR1O75376 2440 aa17.47■□□□□ 0.39
VCPKMT-201ENST00000395859 BDP1A6H8Y1 2624 aa17.46■□□□□ 0.39
VCPKMT-201ENST00000395859 EPHA10Q5JZY3 1008 aa17.46■□□□□ 0.39
VCPKMT-201ENST00000395859 MAP3K21Q5TCX8 1036 aa17.46■□□□□ 0.39
VCPKMT-201ENST00000395859 MAFAQ8NHW3 353 aaPredicted RBP17.46■□□□□ 0.39
VCPKMT-201ENST00000395859 RAPGEFL1Q9UHV5 662 aa17.46■□□□□ 0.39
VCPKMT-201ENST00000395859 PLXNB2O15031 1838 aa17.45■□□□□ 0.38
VCPKMT-201ENST00000395859 PHIPQ8WWQ0 1821 aa17.45■□□□□ 0.38
VCPKMT-201ENST00000395859 PHF20L1A8MW92 1017 aa17.45■□□□□ 0.38
VCPKMT-201ENST00000395859 HHIPL2Q6UWX4 724 aa17.45■□□□□ 0.38
VCPKMT-201ENST00000395859 LDHAL6AQ6ZMR3 332 aa17.45■□□□□ 0.38
VCPKMT-201ENST00000395859 FASTKD5Q7L8L6 764 aaKnown RBP17.45■□□□□ 0.38
VCPKMT-201ENST00000395859 LINS1Q8NG48 757 aa17.45■□□□□ 0.38
VCPKMT-201ENST00000395859 TBC1D22AQ8WUA7 517 aa17.45■□□□□ 0.38
VCPKMT-201ENST00000395859 TMOD2Q9NZR1 351 aa17.45■□□□□ 0.38
VCPKMT-201ENST00000395859 AFG3L2Q9Y4W6 797 aa17.45■□□□□ 0.38
VCPKMT-201ENST00000395859 PLIN1O60240 522 aa17.44■□□□□ 0.38
VCPKMT-201ENST00000395859 MDM2Q00987 491 aaPredicted RBP17.44■□□□□ 0.38
VCPKMT-201ENST00000395859 FAM110CQ1W6H9 321 aa17.44■□□□□ 0.38
VCPKMT-201ENST00000395859 LRRC26Q2I0M4 334 aa17.44■□□□□ 0.38
VCPKMT-201ENST00000395859 ZNF697Q5TEC3 545 aa17.44■□□□□ 0.38
VCPKMT-201ENST00000395859 SYMPKQ92797 1274 aaKnown RBP17.44■□□□□ 0.38
VCPKMT-201ENST00000395859 COA7Q96BR5 231 aa17.44■□□□□ 0.38
VCPKMT-201ENST00000395859 MYH16Q9H6N6 1097 aa17.44■□□□□ 0.38
VCPKMT-201ENST00000395859 HMX1Q9NP08 348 aaPredicted RBP17.44■□□□□ 0.38
VCPKMT-201ENST00000395859 PLA2G5P39877 138 aa17.43■□□□□ 0.38
VCPKMT-201ENST00000395859 SEMA6BQ9H3T3 888 aa17.43■□□□□ 0.38
VCPKMT-201ENST00000395859 ADAMTS8Q9UP79 889 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms