RNA–Protein interactions for RNA: ENST00000395802.7

VAPB-202, Transcript of VAMP associated protein B and C, humanhuman

TSL 1 (best) BASIC

Gene VAPB, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-202ENST00000395802 GAKO14976 1311 aa16.3■□□□□ 0.2
VAPB-202ENST00000395802 SLC27A2O14975 620 aa16.29■□□□□ 0.2
VAPB-202ENST00000395802 ST18O60284 1047 aa16.29■□□□□ 0.2
VAPB-202ENST00000395802 FGAP02671 866 aa16.29■□□□□ 0.2
VAPB-202ENST00000395802 LMNB1P20700 586 aa16.29■□□□□ 0.2
VAPB-202ENST00000395802 TDO2P48775 406 aa16.29■□□□□ 0.2
VAPB-202ENST00000395802 DIXDC1Q155Q3 683 aa16.29■□□□□ 0.2
VAPB-202ENST00000395802 IFNL3Q8IZI9 196 aa16.29■□□□□ 0.2
VAPB-202ENST00000395802 CERS5Q8N5B7 392 aa16.29■□□□□ 0.2
VAPB-202ENST00000395802 KIF2CQ99661 725 aa16.29■□□□□ 0.2
VAPB-202ENST00000395802 F8W031 263 aaPredicted RBP16.29■□□□□ 0.2
VAPB-202ENST00000395802 HMGB1P09429 215 aaKnown RBP16.29■□□□□ 0.2
VAPB-202ENST00000395802 CIAPIN1Q6FI81 312 aa16.29■□□□□ 0.2
VAPB-202ENST00000395802 AMOTL1Q8IY63 956 aa16.29■□□□□ 0.2
VAPB-202ENST00000395802 TM6SF1Q9BZW5 370 aa16.29■□□□□ 0.2
VAPB-202ENST00000395802 KCNQ5Q9NR82 932 aa16.29■□□□□ 0.2
VAPB-202ENST00000395802 DAXXQ9UER7 740 aaPredicted RBP16.29■□□□□ 0.2
VAPB-202ENST00000395802 SNX14Q9Y5W7 946 aa16.29■□□□□ 0.2
VAPB-202ENST00000395802 BTDP43251 543 aa16.28■□□□□ 0.2
VAPB-202ENST00000395802 GRIK5Q16478 980 aa16.28■□□□□ 0.2
VAPB-202ENST00000395802 KIAA0825Q8IV33 1275 aa16.28■□□□□ 0.2
VAPB-202ENST00000395802 GSG1L2A8MUP6 293 aa16.27■□□□□ 0.2
VAPB-202ENST00000395802 PSMD14O00487 310 aa16.27■□□□□ 0.2
VAPB-202ENST00000395802 RAD17O75943 681 aa16.27■□□□□ 0.2
VAPB-202ENST00000395802 RPS12P25398 132 aaKnown RBP16.27■□□□□ 0.2
VAPB-202ENST00000395802 ZDHHC15Q96MV8 337 aa16.27■□□□□ 0.2
VAPB-202ENST00000395802 PALD1Q9ULE6 856 aa16.27■□□□□ 0.2
VAPB-202ENST00000395802 MYH2Q9UKX2 1941 aa16.26■□□□□ 0.19
VAPB-202ENST00000395802 CYP21A2P08686 494 aa16.26■□□□□ 0.19
VAPB-202ENST00000395802 USP5P45974 858 aa16.26■□□□□ 0.19
VAPB-202ENST00000395802 CRKP46108 304 aa16.26■□□□□ 0.19
VAPB-202ENST00000395802 MCM2P49736 904 aa16.26■□□□□ 0.19
VAPB-202ENST00000395802 RASSF7Q02833 373 aa16.26■□□□□ 0.19
VAPB-202ENST00000395802 CXCL9Q07325 125 aa16.26■□□□□ 0.19
VAPB-202ENST00000395802 DAGLAQ9Y4D2 1042 aa16.26■□□□□ 0.19
VAPB-202ENST00000395802 PSME4Q14997 1843 aa16.26■□□□□ 0.19
VAPB-202ENST00000395802 FZD9O00144 591 aa16.26■□□□□ 0.19
VAPB-202ENST00000395802 GRIN3BO60391 1043 aa16.26■□□□□ 0.19
VAPB-202ENST00000395802 DYNLL1P63167 89 aaKnown RBP16.26■□□□□ 0.19
VAPB-202ENST00000395802 TRDNQ13061 729 aa16.26■□□□□ 0.19
VAPB-202ENST00000395802 MXD3Q9BW11 206 aa16.26■□□□□ 0.19
VAPB-202ENST00000395802 ARPP21Q9UBL0 812 aaPredicted RBP16.26■□□□□ 0.19
VAPB-202ENST00000395802 SCN9AQ15858 1988 aa16.25■□□□□ 0.19
VAPB-202ENST00000395802 SLC3A2P08195 630 aaKnown RBP16.25■□□□□ 0.19
VAPB-202ENST00000395802 PCP11498 1178 aaKnown RBP16.25■□□□□ 0.19
VAPB-202ENST00000395802 NT5C2P49902 561 aa16.25■□□□□ 0.19
VAPB-202ENST00000395802 RBM5P52756 815 aaKnown RBP eCLIP16.25■□□□□ 0.19
VAPB-202ENST00000395802 RASEFQ8IZ41 740 aa16.25■□□□□ 0.19
VAPB-202ENST00000395802 SNX21Q969T3 373 aa16.25■□□□□ 0.19
VAPB-202ENST00000395802 RNF41Q9H4P4 317 aaPredicted RBP16.25■□□□□ 0.19
VAPB-202ENST00000395802 CYP46A1Q9Y6A2 500 aa16.25■□□□□ 0.19
VAPB-202ENST00000395802 FOXP2O15409 715 aa16.24■□□□□ 0.19
VAPB-202ENST00000395802 PRKAB2O43741 272 aa16.24■□□□□ 0.19
VAPB-202ENST00000395802 USP17L8P0C7I0 530 aa16.24■□□□□ 0.19
VAPB-202ENST00000395802 SCNN1DP51172 638 aa16.24■□□□□ 0.19
VAPB-202ENST00000395802 HSCBQ8IWL3 235 aa16.24■□□□□ 0.19
VAPB-202ENST00000395802 TEX11Q8IYF3 940 aa16.24■□□□□ 0.19
VAPB-202ENST00000395802 SDR42E1Q8WUS8 393 aa16.24■□□□□ 0.19
VAPB-202ENST00000395802 JAKMIP1Q96N16 626 aaKnown RBP16.24■□□□□ 0.19
VAPB-202ENST00000395802 CASTP20810 708 aaKnown RBP16.24■□□□□ 0.19
VAPB-202ENST00000395802 SLC4A3P48751 1232 aa16.24■□□□□ 0.19
VAPB-202ENST00000395802 NEK4P51957 841 aa16.24■□□□□ 0.19
VAPB-202ENST00000395802 GPR162Q16538 588 aa16.24■□□□□ 0.19
VAPB-202ENST00000395802 BLOC1S2Q6QNY1 142 aa16.24■□□□□ 0.19
VAPB-202ENST00000395802 SH3RF3Q8TEJ3 882 aaPredicted RBP16.24■□□□□ 0.19
VAPB-202ENST00000395802 NEK1Q96PY6 1258 aa16.24■□□□□ 0.19
VAPB-202ENST00000395802 DCP1AQ9NPI6 582 aaPredicted RBP16.24■□□□□ 0.19
VAPB-202ENST00000395802 RUFY3Q7L099 469 aa16.23■□□□□ 0.19
VAPB-202ENST00000395802 GMLQ99445 158 aa16.23■□□□□ 0.19
VAPB-202ENST00000395802 TBC1D2Q9BYX2 928 aa16.23■□□□□ 0.19
VAPB-202ENST00000395802 CNNM2Q9H8M5 875 aa16.23■□□□□ 0.19
VAPB-202ENST00000395802 ZSWIM6Q9HCJ5 1215 aa16.23■□□□□ 0.19
VAPB-202ENST00000395802 EPB41L4AQ9HCS5 686 aaPredicted RBP16.23■□□□□ 0.19
VAPB-202ENST00000395802 SRCAPQ6ZRS2 3230 aa16.23■□□□□ 0.19
VAPB-202ENST00000395802 COL4A5P29400 1685 aa16.23■□□□□ 0.19
VAPB-202ENST00000395802 MYO1BO43795 1136 aa16.22■□□□□ 0.19
VAPB-202ENST00000395802 ANKRD1Q15327 319 aa16.22■□□□□ 0.19
VAPB-202ENST00000395802 SBK1Q52WX2 424 aa16.22■□□□□ 0.19
VAPB-202ENST00000395802 APOBEC3HQ6NTF7 200 aaKnown RBP16.22■□□□□ 0.19
VAPB-202ENST00000395802 RALYLQ86SE5 291 aaKnown RBP16.22■□□□□ 0.19
VAPB-202ENST00000395802 NCOA7Q8NI08 942 aa16.22■□□□□ 0.19
VAPB-202ENST00000395802 DPF2Q92785 391 aa16.22■□□□□ 0.19
VAPB-202ENST00000395802 ZNF287Q9HBT7 754 aa16.22■□□□□ 0.19
VAPB-202ENST00000395802 USP40Q9NVE5 1235 aa16.22■□□□□ 0.19
VAPB-202ENST00000395802 MCM9Q9NXL9 1143 aa16.22■□□□□ 0.19
VAPB-202ENST00000395802 ANAPC4Q9UJX5 808 aa16.22■□□□□ 0.19
VAPB-202ENST00000395802 E7EWF7 191 aa16.22■□□□□ 0.19
VAPB-202ENST00000395802 YBX3P16989 372 aaKnown RBP eCLIP16.22■□□□□ 0.191e-7■□□□□ 9.9
VAPB-202ENST00000395802 RHBDL3P58872 404 aa16.22■□□□□ 0.19
VAPB-202ENST00000395802 PPARAQ07869 468 aa16.22■□□□□ 0.19
VAPB-202ENST00000395802 DLGAP5Q15398 846 aa16.22■□□□□ 0.19
VAPB-202ENST00000395802 CFAP100Q494V2 611 aa16.22■□□□□ 0.19
VAPB-202ENST00000395802 MFSD6Q6ZSS7 791 aa16.22■□□□□ 0.19
VAPB-202ENST00000395802 TGFBRAP1Q8WUH2 860 aa16.22■□□□□ 0.19
VAPB-202ENST00000395802 KRT23Q9C075 422 aa16.22■□□□□ 0.19
VAPB-202ENST00000395802 TMOD2Q9NZR1 351 aa16.22■□□□□ 0.19
VAPB-202ENST00000395802 MINDY4BA8MYZ0 360 aa16.21■□□□□ 0.19
VAPB-202ENST00000395802 NPM3O75607 178 aaKnown RBP16.21■□□□□ 0.19
VAPB-202ENST00000395802 HAND2P61296 217 aa16.21■□□□□ 0.19
VAPB-202ENST00000395802 GPC2Q8N158 579 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms