RNA–Protein interactions for RNA: ENST00000395756.5

SREBF1-204, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 3,026 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-204ENST00000395756 MAP3K11Q16584 847 aa20.91■□□□□ 0.94
SREBF1-204ENST00000395756 MFSD6Q6ZSS7 791 aa20.91■□□□□ 0.94
SREBF1-204ENST00000395756 FAM84BQ96KN1 310 aaPredicted RBP20.91■□□□□ 0.94
SREBF1-204ENST00000395756 TPTE2Q6XPS3 522 aa20.91■□□□□ 0.94
SREBF1-204ENST00000395756 FAM196AQ6ZSG2 479 aa20.91■□□□□ 0.94
SREBF1-204ENST00000395756 ILDR1Q86SU0 546 aaPredicted RBP20.91■□□□□ 0.94
SREBF1-204ENST00000395756 GNL3LQ9NVN8 582 aaKnown RBP20.91■□□□□ 0.94
SREBF1-204ENST00000395756 PRDM1O75626 825 aa20.9■□□□□ 0.94
SREBF1-204ENST00000395756 SF3B3Q15393 1217 aaKnown RBP20.9■□□□□ 0.94
SREBF1-204ENST00000395756 ZNF830Q96NB3 372 aaPredicted RBP20.9■□□□□ 0.94
SREBF1-204ENST00000395756 NACAP1Q9BZK3 213 aa20.9■□□□□ 0.94
SREBF1-204ENST00000395756 ELP1O95163 1332 aa20.9■□□□□ 0.94
SREBF1-204ENST00000395756 SALL1Q9NSC2 1324 aa20.9■□□□□ 0.94
SREBF1-204ENST00000395756 SH2B2O14492 632 aaPredicted RBP20.89■□□□□ 0.94
SREBF1-204ENST00000395756 CLCN1P35523 988 aa20.89■□□□□ 0.93
SREBF1-204ENST00000395756 CCAR1Q8IX12 1150 aaKnown RBP20.89■□□□□ 0.93
SREBF1-204ENST00000395756 NRAPQ86VF7 1730 aa20.89■□□□□ 0.93
SREBF1-204ENST00000395756 AKAP11Q9UKA4 1901 aa20.89■□□□□ 0.93
SREBF1-204ENST00000395756 CCDC192P0DO97 292 aa20.88■□□□□ 0.93
SREBF1-204ENST00000395756 SF3A1Q15459 793 aaKnown RBP20.88■□□□□ 0.93
SREBF1-204ENST00000395756 APOA5Q6Q788 366 aa20.88■□□□□ 0.93
SREBF1-204ENST00000395756 TXNRD3Q86VQ6 643 aa20.88■□□□□ 0.93
SREBF1-204ENST00000395756 NUP133Q8WUM0 1156 aa20.88■□□□□ 0.93
SREBF1-204ENST00000395756 CHMP4CQ96CF2 233 aa20.88■□□□□ 0.93
SREBF1-204ENST00000395756 PDLIM2Q96JY6 352 aa20.88■□□□□ 0.93
SREBF1-204ENST00000395756 MYO5AQ9Y4I1 1855 aaKnown RBP20.88■□□□□ 0.93
SREBF1-204ENST00000395756 ZBTB43O43298 467 aa20.88■□□□□ 0.93
SREBF1-204ENST00000395756 AKNAD1Q5T1N1 836 aa20.88■□□□□ 0.93
SREBF1-204ENST00000395756 IGDCC4Q8TDY8 1250 aa20.88■□□□□ 0.93
SREBF1-204ENST00000395756 GJD4Q96KN9 370 aaPredicted RBP20.88■□□□□ 0.93
SREBF1-204ENST00000395756 GPR101Q96P66 508 aaPredicted RBP20.88■□□□□ 0.93
SREBF1-204ENST00000395756 SLC12A7Q9Y666 1083 aa20.88■□□□□ 0.93
SREBF1-204ENST00000395756 MAGEB6P1A0A0J9YX57 407 aa20.88■□□□□ 0.93
SREBF1-204ENST00000395756 ADCY5O95622 1261 aa20.88■□□□□ 0.93
SREBF1-204ENST00000395756 EVCP57679 992 aa20.88■□□□□ 0.93
SREBF1-204ENST00000395756 ZSCAN30Q86W11 494 aa20.88■□□□□ 0.93
SREBF1-204ENST00000395756 CLIC4Q9Y696 253 aa20.88■□□□□ 0.93
SREBF1-204ENST00000395756 MYH3P11055 1940 aa20.87■□□□□ 0.93
SREBF1-204ENST00000395756 CCDC69A6NI79 296 aa20.87■□□□□ 0.93
SREBF1-204ENST00000395756 GOLGA8AA7E2F4 631 aa20.87■□□□□ 0.93
SREBF1-204ENST00000395756 GNL2Q13823 731 aaKnown RBP20.87■□□□□ 0.93
SREBF1-204ENST00000395756 LUZP1Q86V48 1076 aa20.87■□□□□ 0.93
SREBF1-204ENST00000395756 EVX2Q03828 476 aa20.87■□□□□ 0.93
SREBF1-204ENST00000395756 TRAPPC3LQ5T215 181 aa20.87■□□□□ 0.93
SREBF1-204ENST00000395756 FBXO18Q8NFZ0 1043 aa20.87■□□□□ 0.93
SREBF1-204ENST00000395756 ALG1Q9BT22 464 aa20.87■□□□□ 0.93
SREBF1-204ENST00000395756 CNTNAP4Q9C0A0 1308 aa20.87■□□□□ 0.93
SREBF1-204ENST00000395756 KIF28PB7ZC32 967 aa20.86■□□□□ 0.93
SREBF1-204ENST00000395756 UBE4AQ14139 1066 aa20.86■□□□□ 0.93
SREBF1-204ENST00000395756 FUCA2Q9BTY2 467 aa20.86■□□□□ 0.93
SREBF1-204ENST00000395756 PDCL3Q9H2J4 239 aa20.86■□□□□ 0.93
SREBF1-204ENST00000395756 LY9Q9HBG7 655 aa20.86■□□□□ 0.93
SREBF1-204ENST00000395756 ANKIB1Q9P2G1 1089 aa20.86■□□□□ 0.93
SREBF1-204ENST00000395756 ANKRD36CQ5JPF3 1778 aa20.86■□□□□ 0.93
SREBF1-204ENST00000395756 TAF1P21675 1872 aa20.86■□□□□ 0.93
SREBF1-204ENST00000395756 TYRO3Q06418 890 aa20.86■□□□□ 0.93
SREBF1-204ENST00000395756 ZNF396Q96N95 335 aaPredicted RBP20.86■□□□□ 0.93
SREBF1-204ENST00000395756 SLC26A6Q9BXS9 759 aa20.86■□□□□ 0.93
SREBF1-204ENST00000395756 GOLPH3LQ9H4A5 285 aa20.86■□□□□ 0.93
SREBF1-204ENST00000395756 SEPT12Q8IYM1 358 aa20.86■□□□□ 0.93
SREBF1-204ENST00000395756 NYXQ9GZU5 481 aa20.86■□□□□ 0.93
SREBF1-204ENST00000395756 LAMA4Q16363 1823 aa20.85■□□□□ 0.93
SREBF1-204ENST00000395756 ANO6Q4KMQ2 910 aa20.85■□□□□ 0.93
SREBF1-204ENST00000395756 LRRC4BQ9NT99 713 aa20.85■□□□□ 0.93
SREBF1-204ENST00000395756 AATFQ9NY61 560 aaKnown RBP eCLIP20.85■□□□□ 0.93
SREBF1-204ENST00000395756 NWD2Q9ULI1 1742 aa20.85■□□□□ 0.93
SREBF1-204ENST00000395756 AFF2P51816 1311 aa20.85■□□□□ 0.93
SREBF1-204ENST00000395756 A0A1B0GVL5 298 aa20.85■□□□□ 0.93
SREBF1-204ENST00000395756 HSPA1LP34931 641 aa20.85■□□□□ 0.93
SREBF1-204ENST00000395756 STK38Q15208 465 aa20.85■□□□□ 0.93
SREBF1-204ENST00000395756 SPC24Q8NBT2 197 aa20.85■□□□□ 0.93
SREBF1-204ENST00000395756 PRDX5P30044 214 aa20.84■□□□□ 0.93
SREBF1-204ENST00000395756 SPEF2Q9C093 1822 aa20.84■□□□□ 0.93
SREBF1-204ENST00000395756 AP5Z1O43299 807 aa20.84■□□□□ 0.93
SREBF1-204ENST00000395756 MARCKSP29966 332 aaPredicted RBP20.84■□□□□ 0.93
SREBF1-204ENST00000395756 IARSP41252 1262 aaKnown RBP20.84■□□□□ 0.93
SREBF1-204ENST00000395756 PPARAQ07869 468 aa20.84■□□□□ 0.93
SREBF1-204ENST00000395756 SYNE3Q6ZMZ3 975 aa20.84■□□□□ 0.93
SREBF1-204ENST00000395756 FBXL16Q8N461 479 aa20.84■□□□□ 0.93
SREBF1-204ENST00000395756 FSIP1Q8NA03 581 aa20.84■□□□□ 0.93
SREBF1-204ENST00000395756 ARID3AQ99856 593 aa20.84■□□□□ 0.93
SREBF1-204ENST00000395756 RCOR1Q9UKL0 485 aa20.84■□□□□ 0.93
SREBF1-204ENST00000395756 RANBP6O60518 1105 aaKnown RBP20.83■□□□□ 0.93
SREBF1-204ENST00000395756 HIBADHP31937 336 aaKnown RBP20.83■□□□□ 0.93
SREBF1-204ENST00000395756 SASS6Q6UVJ0 657 aa20.83■□□□□ 0.93
SREBF1-204ENST00000395756 MRVI1Q9Y6F6 885 aa20.83■□□□□ 0.93
SREBF1-204ENST00000395756 ZNF384Q8TF68 577 aa20.83■□□□□ 0.93
SREBF1-204ENST00000395756 TMEM87BQ96K49 555 aa20.83■□□□□ 0.93
SREBF1-204ENST00000395756 DNAJC25Q9H1X3 360 aa20.83■□□□□ 0.93
SREBF1-204ENST00000395756 PCDHA7Q9UN72 937 aa20.83■□□□□ 0.93
SREBF1-204ENST00000395756 ZMYM6O95789 1325 aa20.83■□□□□ 0.92
SREBF1-204ENST00000395756 CPLX2Q6PUV4 134 aaKnown RBP20.83■□□□□ 0.92
SREBF1-204ENST00000395756 CLSTN2Q9H4D0 955 aa20.83■□□□□ 0.92
SREBF1-204ENST00000395756 DDX19AQ9NUU7 478 aaKnown RBP20.83■□□□□ 0.92
SREBF1-204ENST00000395756 RTL9Q8NET4 1388 aa20.82■□□□□ 0.92
SREBF1-204ENST00000395756 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.82■□□□□ 0.92
SREBF1-204ENST00000395756 hCG_1642624A0A1W2PR95 340 aa20.82■□□□□ 0.92
SREBF1-204ENST00000395756 ERICH2A1L162 156 aa20.82■□□□□ 0.92
SREBF1-204ENST00000395756 GUCY1A2P33402 732 aa20.82■□□□□ 0.92
SREBF1-204ENST00000395756 NFIXQ14938 502 aa20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms