RNA–Protein interactions for RNA: ENST00000395246.5

CDC42SE2-202, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE2, Length 3,485 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-202ENST00000395246 MBD3O95983 291 aa16.76■□□□□ 0.27
CDC42SE2-202ENST00000395246 SEC23AQ15436 765 aa16.76■□□□□ 0.27
CDC42SE2-202ENST00000395246 NTRK3Q16288 839 aa16.76■□□□□ 0.27
CDC42SE2-202ENST00000395246 TTLL5Q6EMB2 1281 aa16.76■□□□□ 0.27
CDC42SE2-202ENST00000395246 ZSCAN16Q9H4T2 348 aaPredicted RBP16.76■□□□□ 0.27
CDC42SE2-202ENST00000395246 NPR1P16066 1061 aa16.76■□□□□ 0.27
CDC42SE2-202ENST00000395246 FAM177A1Q8N128 213 aaPredicted RBP16.76■□□□□ 0.27
CDC42SE2-202ENST00000395246 TCP11L1Q9NUJ3 509 aa16.76■□□□□ 0.27
CDC42SE2-202ENST00000395246 KLRK1P26718 216 aa16.75■□□□□ 0.27
CDC42SE2-202ENST00000395246 AKNAD1Q5T1N1 836 aa16.75■□□□□ 0.27
CDC42SE2-202ENST00000395246 NKX2-3Q8TAU0 364 aa16.75■□□□□ 0.27
CDC42SE2-202ENST00000395246 C7orf43Q8WVR3 580 aa16.75■□□□□ 0.27
CDC42SE2-202ENST00000395246 SCN9AQ15858 1988 aa16.75■□□□□ 0.27
CDC42SE2-202ENST00000395246 FDPSP14324 419 aaKnown RBP16.75■□□□□ 0.27
CDC42SE2-202ENST00000395246 NEDD4P46934 1319 aa16.75■□□□□ 0.27
CDC42SE2-202ENST00000395246 GYG1P46976 350 aa16.75■□□□□ 0.27
CDC42SE2-202ENST00000395246 GPSM2P81274 684 aa16.75■□□□□ 0.27
CDC42SE2-202ENST00000395246 BRPF3Q9ULD4 1205 aa16.75■□□□□ 0.27
CDC42SE2-202ENST00000395246 HSP90AA1P07900 732 aaKnown RBP16.74■□□□□ 0.27
CDC42SE2-202ENST00000395246 RBM43Q6ZSC3 357 aaKnown RBP16.74■□□□□ 0.27
CDC42SE2-202ENST00000395246 CYB5R4Q7L1T6 521 aa16.74■□□□□ 0.27
CDC42SE2-202ENST00000395246 CCDC83Q8IWF9 413 aa16.74■□□□□ 0.27
CDC42SE2-202ENST00000395246 FBXO41Q8TF61 875 aa16.74■□□□□ 0.27
CDC42SE2-202ENST00000395246 FAM217BQ9NTX9 383 aaPredicted RBP16.74■□□□□ 0.27
CDC42SE2-202ENST00000395246 ANGEL1Q9UNK9 670 aaKnown RBP16.74■□□□□ 0.27
CDC42SE2-202ENST00000395246 GOLGA6L22H0YM25 854 aa16.74■□□□□ 0.27
CDC42SE2-202ENST00000395246 SMIM5Q71RC9 77 aa16.74■□□□□ 0.27
CDC42SE2-202ENST00000395246 NPM3O75607 178 aaKnown RBP16.73■□□□□ 0.27
CDC42SE2-202ENST00000395246 MBD4O95243 580 aa16.73■□□□□ 0.27
CDC42SE2-202ENST00000395246 KCNJ4P48050 445 aa16.73■□□□□ 0.27
CDC42SE2-202ENST00000395246 AIDAQ96BJ3 306 aa16.73■□□□□ 0.27
CDC42SE2-202ENST00000395246 MYO3BQ8WXR4 1341 aa16.73■□□□□ 0.27
CDC42SE2-202ENST00000395246 WTIPA6NIX2 430 aaPredicted RBP16.73■□□□□ 0.27
CDC42SE2-202ENST00000395246 SNAP23O00161 211 aa16.73■□□□□ 0.27
CDC42SE2-202ENST00000395246 MECOMQ03112 1051 aa16.73■□□□□ 0.27
CDC42SE2-202ENST00000395246 WASHC4Q2M389 1173 aa16.73■□□□□ 0.27
CDC42SE2-202ENST00000395246 SPRYD3Q8NCJ5 442 aa16.73■□□□□ 0.27
CDC42SE2-202ENST00000395246 VPS33BQ9H267 617 aa16.73■□□□□ 0.27
CDC42SE2-202ENST00000395246 RNF41Q9H4P4 317 aaPredicted RBP16.73■□□□□ 0.27
CDC42SE2-202ENST00000395246 TXNRD3Q86VQ6 643 aa16.72■□□□□ 0.27
CDC42SE2-202ENST00000395246 TMTC2Q8N394 836 aa16.72■□□□□ 0.27
CDC42SE2-202ENST00000395246 TBC1D16Q8TBP0 767 aa16.72■□□□□ 0.27
CDC42SE2-202ENST00000395246 GPR75-ASB3A0A0A6YYF3 556 aa16.72■□□□□ 0.27
CDC42SE2-202ENST00000395246 PRC1O43663 620 aa16.72■□□□□ 0.27
CDC42SE2-202ENST00000395246 PDE6BP35913 854 aa16.72■□□□□ 0.27
CDC42SE2-202ENST00000395246 ZNF804AQ7Z570 1209 aa16.72■□□□□ 0.27
CDC42SE2-202ENST00000395246 MAGEB6P1A0A0J9YX57 407 aa16.72■□□□□ 0.27
CDC42SE2-202ENST00000395246 NBPF11Q86T75 865 aa16.71■□□□□ 0.27
CDC42SE2-202ENST00000395246 BRF1Q92994 677 aa16.71■□□□□ 0.27
CDC42SE2-202ENST00000395246 NACAP1Q9BZK3 213 aa16.71■□□□□ 0.27
CDC42SE2-202ENST00000395246 ARPP21Q9UBL0 812 aaPredicted RBP16.71■□□□□ 0.27
CDC42SE2-202ENST00000395246 GSTO1P78417 241 aa16.71■□□□□ 0.27
CDC42SE2-202ENST00000395246 MROH7-TTC4A0A0A0MT08 1334 aa16.71■□□□□ 0.27
CDC42SE2-202ENST00000395246 IDH1O75874 414 aaKnown RBP16.71■□□□□ 0.26
CDC42SE2-202ENST00000395246 ALDH1B1P30837 517 aa16.71■□□□□ 0.26
CDC42SE2-202ENST00000395246 DEKP35659 375 aaKnown RBP16.71■□□□□ 0.26
CDC42SE2-202ENST00000395246 TBC1D22AQ8WUA7 517 aa16.71■□□□□ 0.26
CDC42SE2-202ENST00000395246 COA1Q9GZY4 146 aa16.71■□□□□ 0.26
CDC42SE2-202ENST00000395246 PPARAQ07869 468 aa16.7■□□□□ 0.26
CDC42SE2-202ENST00000395246 ARXQ96QS3 562 aa16.7■□□□□ 0.26
CDC42SE2-202ENST00000395246 DHX16O60231 1041 aaKnown RBP16.7■□□□□ 0.26
CDC42SE2-202ENST00000395246 UBE2HP62256 183 aa16.7■□□□□ 0.26
CDC42SE2-202ENST00000395246 CSPP1Q1MSJ5 1256 aa16.7■□□□□ 0.26
CDC42SE2-202ENST00000395246 CTR9Q6PD62 1173 aa16.7■□□□□ 0.26
CDC42SE2-202ENST00000395246 MASTLQ96GX5 879 aa16.7■□□□□ 0.26
CDC42SE2-202ENST00000395246 CD209Q9NNX6 404 aa16.7■□□□□ 0.26
CDC42SE2-202ENST00000395246 FAM237AA0A1B0GTK4 181 aa16.69■□□□□ 0.26
CDC42SE2-202ENST00000395246 POTEAQ6S8J7 498 aa16.69■□□□□ 0.26
CDC42SE2-202ENST00000395246 ILDR1Q86SU0 546 aaPredicted RBP16.69■□□□□ 0.26
CDC42SE2-202ENST00000395246 ARMT1Q9H993 441 aa16.69■□□□□ 0.26
CDC42SE2-202ENST00000395246 POLLQ9UGP5 575 aa16.69■□□□□ 0.26
CDC42SE2-202ENST00000395246 FUT2Q10981 343 aa16.69■□□□□ 0.26
CDC42SE2-202ENST00000395246 APOA5Q6Q788 366 aa16.69■□□□□ 0.26
CDC42SE2-202ENST00000395246 DCP1AQ9NPI6 582 aaPredicted RBP16.69■□□□□ 0.26
CDC42SE2-202ENST00000395246 SLC15A2Q16348 729 aa16.68■□□□□ 0.26
CDC42SE2-202ENST00000395246 FUCA2Q9BTY2 467 aa16.68■□□□□ 0.26
CDC42SE2-202ENST00000395246 ZSWIM5Q9P217 1185 aa16.68■□□□□ 0.26
CDC42SE2-202ENST00000395246 PPEF1O14829 653 aaPredicted RBP16.68■□□□□ 0.26
CDC42SE2-202ENST00000395246 APOBRQ0VD83 1088 aa16.68■□□□□ 0.26
CDC42SE2-202ENST00000395246 NECAB1Q8N987 351 aa16.68■□□□□ 0.26
CDC42SE2-202ENST00000395246 RPGRQ92834 1020 aaKnown RBP16.68■□□□□ 0.26
CDC42SE2-202ENST00000395246 KIF3AQ9Y496 699 aa16.68■□□□□ 0.26
CDC42SE2-202ENST00000395246 CYP7A1P22680 504 aa16.68■□□□□ 0.26
CDC42SE2-202ENST00000395246 HDLBPQ00341 1268 aaKnown RBP16.68■□□□□ 0.26
CDC42SE2-202ENST00000395246 GGA1Q9UJY5 639 aa16.68■□□□□ 0.26
CDC42SE2-202ENST00000395246 IFNAR1P17181 557 aa16.67■□□□□ 0.26
CDC42SE2-202ENST00000395246 CDC37L1Q7L3B6 337 aa16.67■□□□□ 0.26
CDC42SE2-202ENST00000395246 RCOR1Q9UKL0 485 aa16.67■□□□□ 0.26
CDC42SE2-202ENST00000395246 SLC4A4Q9Y6R1 1079 aa16.67■□□□□ 0.26
CDC42SE2-202ENST00000395246 BICDL1Q6ZP65 573 aa16.67■□□□□ 0.26
CDC42SE2-202ENST00000395246 FOXD4L1Q9NU39 408 aa16.67■□□□□ 0.26
CDC42SE2-202ENST00000395246 PAPPA2Q9BXP8 1791 aa16.67■□□□□ 0.26
CDC42SE2-202ENST00000395246 DICER1Q9UPY3 1922 aaKnown RBP16.67■□□□□ 0.26
CDC42SE2-202ENST00000395246 PTPDC1A2A3K4 754 aa16.66■□□□□ 0.26
CDC42SE2-202ENST00000395246 U2AF2P26368 475 aaKnown RBP eCLIP16.66■□□□□ 0.266e-6■■■■□ 22.5
CDC42SE2-202ENST00000395246 CC2D2BQ6DHV5 1058 aa16.66■□□□□ 0.26
CDC42SE2-202ENST00000395246 METTL16Q86W50 562 aaKnown RBP16.66■□□□□ 0.26
CDC42SE2-202ENST00000395246 NAPBQ9H115 298 aa16.66■□□□□ 0.26
CDC42SE2-202ENST00000395246 APBA3O96018 575 aa16.66■□□□□ 0.26
CDC42SE2-202ENST00000395246 L1TD1Q5T7N2 865 aaKnown RBP16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms