RNA–Protein interactions for RNA: ENST00000394768.6

SYNE2-205, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 11,095 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-205ENST00000394768 SV2BQ7L1I2 683 aa8.31□□□□□ -1.08
SYNE2-205ENST00000394768 MAGI1Q96QZ7 1491 aaPredicted RBP8.31□□□□□ -1.08
SYNE2-205ENST00000394768 GPTP24298 496 aa8.31□□□□□ -1.08
SYNE2-205ENST00000394768 LEO1Q8WVC0 666 aaPredicted RBP8.3□□□□□ -1.08
SYNE2-205ENST00000394768 PARP2Q9UGN5 583 aa8.3□□□□□ -1.08
SYNE2-205ENST00000394768 LAMC3Q9Y6N6 1575 aa8.3□□□□□ -1.08
SYNE2-205ENST00000394768 SPOUT1Q5T280 376 aaKnown RBP8.3□□□□□ -1.08
SYNE2-205ENST00000394768 TSKSQ9UJT2 592 aa8.3□□□□□ -1.08
SYNE2-205ENST00000394768 RTL1A6NKG5 1358 aa8.3□□□□□ -1.08
SYNE2-205ENST00000394768 ESYT2A0FGR8 921 aa8.3□□□□□ -1.08
SYNE2-205ENST00000394768 PICALMQ13492 652 aa8.3□□□□□ -1.08
SYNE2-205ENST00000394768 PRPF38AQ8NAV1 312 aaKnown RBP8.3□□□□□ -1.08
SYNE2-205ENST00000394768 P3H4Q92791 437 aa8.3□□□□□ -1.08
SYNE2-205ENST00000394768 SELENOSQ9BQE4 189 aa8.3□□□□□ -1.08
SYNE2-205ENST00000394768 CCPG1Q9ULG6 757 aa8.3□□□□□ -1.08
SYNE2-205ENST00000394768 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.3□□□□□ -1.08
SYNE2-205ENST00000394768 KRT5P13647 590 aa8.3□□□□□ -1.08
SYNE2-205ENST00000394768 UBXN1Q04323 297 aa8.3□□□□□ -1.08
SYNE2-205ENST00000394768 PPANQ9NQ55 473 aaKnown RBP8.3□□□□□ -1.08
SYNE2-205ENST00000394768 ARHGEF37A1IGU5 675 aa8.3□□□□□ -1.08
SYNE2-205ENST00000394768 WASLO00401 505 aaPredicted RBP8.3□□□□□ -1.08
SYNE2-205ENST00000394768 ABCD1P33897 745 aa8.3□□□□□ -1.08
SYNE2-205ENST00000394768 NONOQ15233 471 aaKnown RBP eCLIP8.3□□□□□ -1.08
SYNE2-205ENST00000394768 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.3□□□□□ -1.08
SYNE2-205ENST00000394768 LMNTD2Q8IXW0 634 aa8.3□□□□□ -1.08
SYNE2-205ENST00000394768 DENND2AQ9ULE3 1009 aa8.3□□□□□ -1.08
SYNE2-205ENST00000394768 PALM3A6NDB9 673 aaPredicted RBP8.3□□□□□ -1.08
SYNE2-205ENST00000394768 ZNF365Q70YC5 407 aa8.3□□□□□ -1.08
SYNE2-205ENST00000394768 SDCCAG3Q96C92 435 aa8.3□□□□□ -1.08
SYNE2-205ENST00000394768 DNAJC8O75937 253 aaPredicted RBP8.3□□□□□ -1.08
SYNE2-205ENST00000394768 OTUD7BQ6GQQ9 843 aa8.3□□□□□ -1.08
SYNE2-205ENST00000394768 GJC1P36383 396 aa8.29□□□□□ -1.08
SYNE2-205ENST00000394768 TFCP2L1Q9NZI6 479 aa8.29□□□□□ -1.08
SYNE2-205ENST00000394768 BAG5Q9UL15 447 aa8.29□□□□□ -1.08
SYNE2-205ENST00000394768 KLF18A0A0U1RQI7 1052 aa8.29□□□□□ -1.08
SYNE2-205ENST00000394768 SLC17A8Q8NDX2 589 aa8.29□□□□□ -1.08
SYNE2-205ENST00000394768 ALDH1L1O75891 902 aa8.29□□□□□ -1.08
SYNE2-205ENST00000394768 ADCY5O95622 1261 aa8.29□□□□□ -1.08
SYNE2-205ENST00000394768 ZCRB1Q8TBF4 217 aaKnown RBP8.29□□□□□ -1.08
SYNE2-205ENST00000394768 ZBTB3Q9H5J0 574 aa8.29□□□□□ -1.08
SYNE2-205ENST00000394768 PPP4R1Q8TF05 950 aa8.29□□□□□ -1.08
SYNE2-205ENST00000394768 CSRNP1Q96S65 589 aa8.29□□□□□ -1.08
SYNE2-205ENST00000394768 TTC1Q99614 292 aa8.29□□□□□ -1.08
SYNE2-205ENST00000394768 NUP58Q9BVL2 599 aa8.29□□□□□ -1.08
SYNE2-205ENST00000394768 CPSF2Q9P2I0 782 aaKnown RBP8.29□□□□□ -1.08
SYNE2-205ENST00000394768 ZNF644Q9H582 1327 aaPredicted RBP8.29□□□□□ -1.08
SYNE2-205ENST00000394768 SPOPO43791 374 aa8.29□□□□□ -1.08
SYNE2-205ENST00000394768 OATP04181 439 aa8.29□□□□□ -1.08
SYNE2-205ENST00000394768 KRT28Q7Z3Y7 464 aa8.29□□□□□ -1.08
SYNE2-205ENST00000394768 FAM200AQ8TCP9 573 aa8.29□□□□□ -1.08
SYNE2-205ENST00000394768 CCDC8Q9H0W5 538 aaPredicted RBP8.29□□□□□ -1.08
SYNE2-205ENST00000394768 CEP85LQ5SZL2 805 aa8.29□□□□□ -1.08
SYNE2-205ENST00000394768 MCM9Q9NXL9 1143 aa8.29□□□□□ -1.08
SYNE2-205ENST00000394768 SCAF11Q99590 1463 aaKnown RBP8.29□□□□□ -1.08
SYNE2-205ENST00000394768 PCDH11XQ9BZA7 1347 aa8.29□□□□□ -1.08
SYNE2-205ENST00000394768 PCDH11YQ9BZA8 1340 aa8.29□□□□□ -1.08
SYNE2-205ENST00000394768 CCDC124Q96CT7 223 aaKnown RBP8.29□□□□□ -1.08
SYNE2-205ENST00000394768 AS3MTQ9HBK9 375 aa8.29□□□□□ -1.08
SYNE2-205ENST00000394768 DENND4BO75064 1496 aaPredicted RBP8.29□□□□□ -1.08
SYNE2-205ENST00000394768 GUCY1B3Q02153 619 aa8.29□□□□□ -1.08
SYNE2-205ENST00000394768 MCUR1Q96AQ8 359 aa8.29□□□□□ -1.08
SYNE2-205ENST00000394768 ZNF853P0CG23 659 aa8.28□□□□□ -1.08
SYNE2-205ENST00000394768 PPP2R5DQ14738 602 aa8.28□□□□□ -1.08
SYNE2-205ENST00000394768 EP400NLQ6ZTU2 488 aa8.28□□□□□ -1.08
SYNE2-205ENST00000394768 PHBP35232 272 aa8.28□□□□□ -1.08
SYNE2-205ENST00000394768 TRPC6Q9Y210 931 aa8.28□□□□□ -1.08
SYNE2-205ENST00000394768 A0A1B0GUA9 196 aa8.28□□□□□ -1.08
SYNE2-205ENST00000394768 OTUD6AQ7L8S5 288 aa8.28□□□□□ -1.08
SYNE2-205ENST00000394768 STK32BQ9NY57 414 aa8.28□□□□□ -1.08
SYNE2-205ENST00000394768 PPIP5K1Q6PFW1 1433 aa8.28□□□□□ -1.08
SYNE2-205ENST00000394768 GKAP1Q5VSY0 366 aaPredicted RBP8.28□□□□□ -1.08
SYNE2-205ENST00000394768 FAM76AQ8TAV0 307 aa8.28□□□□□ -1.08
SYNE2-205ENST00000394768 ARHGAP45Q92619 1136 aa8.28□□□□□ -1.08
SYNE2-205ENST00000394768 PRKAG2Q9UGJ0 569 aa8.28□□□□□ -1.08
SYNE2-205ENST00000394768 TRPM2O94759 1503 aa8.28□□□□□ -1.08
SYNE2-205ENST00000394768 BIN1O00499 593 aa8.28□□□□□ -1.08
SYNE2-205ENST00000394768 ARHGAP4P98171 946 aa8.28□□□□□ -1.08
SYNE2-205ENST00000394768 NIP7Q9Y221 180 aaKnown RBP eCLIP8.28□□□□□ -1.08
SYNE2-205ENST00000394768 GNA14O95837 355 aa8.28□□□□□ -1.08
SYNE2-205ENST00000394768 Q9H521 79 aa8.28□□□□□ -1.08
SYNE2-205ENST00000394768 RNF216Q9NWF9 866 aaPredicted RBP8.28□□□□□ -1.08
SYNE2-205ENST00000394768 TMEM110-MUSTN1A8MSY1 372 aa8.28□□□□□ -1.08
SYNE2-205ENST00000394768 SLFN5Q08AF3 891 aa8.28□□□□□ -1.08
SYNE2-205ENST00000394768 RUFY4Q6ZNE9 571 aa8.28□□□□□ -1.08
SYNE2-205ENST00000394768 KCNK9Q9NPC2 374 aa8.28□□□□□ -1.08
SYNE2-205ENST00000394768 FLOT1O75955 427 aa8.28□□□□□ -1.08
SYNE2-205ENST00000394768 ZSCAN22P10073 491 aaPredicted RBP8.28□□□□□ -1.08
SYNE2-205ENST00000394768 CCDC68Q9H2F9 335 aa8.28□□□□□ -1.08
SYNE2-205ENST00000394768 AFMP43652 599 aa8.28□□□□□ -1.08
SYNE2-205ENST00000394768 MTMR3Q13615 1198 aa8.28□□□□□ -1.08
SYNE2-205ENST00000394768 GNPTABQ3T906 1256 aa8.28□□□□□ -1.08
SYNE2-205ENST00000394768 PARP10Q53GL7 1025 aa8.28□□□□□ -1.08
SYNE2-205ENST00000394768 GOLGA5Q8TBA6 731 aa8.28□□□□□ -1.08
SYNE2-205ENST00000394768 IPO4Q8TEX9 1081 aaKnown RBP8.28□□□□□ -1.08
SYNE2-205ENST00000394768 SYT1P21579 422 aa8.27□□□□□ -1.08
SYNE2-205ENST00000394768 EIF3CLB5ME19 914 aaKnown RBP8.27□□□□□ -1.09
SYNE2-205ENST00000394768 GTF2F1P35269 517 aaKnown RBP eCLIP8.27□□□□□ -1.09
SYNE2-205ENST00000394768 RPS6KA2Q15349 733 aa8.27□□□□□ -1.09
SYNE2-205ENST00000394768 DCAF17Q5H9S7 520 aaPredicted RBP8.27□□□□□ -1.09
SYNE2-205ENST00000394768 DCUN1D2Q6PH85 259 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms