RNA–Protein interactions for RNA: ENST00000394729.6

PRKCD-202, Transcript of protein kinase C delta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKCD, Length 2,810 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCD-202ENST00000394729 ANO8Q9HCE9 1232 aaPredicted RBP23.96■■□□□ 1.43
PRKCD-202ENST00000394729 GOLGA6L3A6NEY3 463 aa23.96■■□□□ 1.43
PRKCD-202ENST00000394729 UBE2Q2LH0YL09 131 aa23.96■■□□□ 1.43
PRKCD-202ENST00000394729 ZSWIM5Q9P217 1185 aa23.95■■□□□ 1.42
PRKCD-202ENST00000394729 CICQ96RK0 1608 aaPredicted RBP23.95■■□□□ 1.42
PRKCD-202ENST00000394729 ADD1P35611 737 aaKnown RBP23.95■■□□□ 1.42
PRKCD-202ENST00000394729 DEFB132Q7Z7B7 95 aa23.95■■□□□ 1.42
PRKCD-202ENST00000394729 FTOQ9C0B1 505 aaKnown RBP eCLIP23.94■■□□□ 1.42
PRKCD-202ENST00000394729 CASZ1Q86V15 1759 aa23.94■■□□□ 1.42
PRKCD-202ENST00000394729 LAMA4Q16363 1823 aa23.94■■□□□ 1.42
PRKCD-202ENST00000394729 NSUN7Q8NE18 718 aaKnown RBP23.94■■□□□ 1.42
PRKCD-202ENST00000394729 NACAP1Q9BZK3 213 aa23.94■■□□□ 1.42
PRKCD-202ENST00000394729 POLLQ9UGP5 575 aa23.94■■□□□ 1.42
PRKCD-202ENST00000394729 MFSD6Q6ZSS7 791 aa23.93■■□□□ 1.42
PRKCD-202ENST00000394729 NSUN4Q96CB9 384 aaKnown RBP23.93■■□□□ 1.42
PRKCD-202ENST00000394729 TMEM63CQ9P1W3 806 aa23.93■■□□□ 1.42
PRKCD-202ENST00000394729 CPLX1O14810 134 aa23.93■■□□□ 1.42
PRKCD-202ENST00000394729 KLHL40Q2TBA0 621 aa23.93■■□□□ 1.42
PRKCD-202ENST00000394729 CLEC17AQ6ZS10 378 aa23.93■■□□□ 1.42
PRKCD-202ENST00000394729 RBM17Q96I25 401 aaKnown RBP23.93■■□□□ 1.42
PRKCD-202ENST00000394729 AIFM3Q96NN9 605 aa23.93■■□□□ 1.42
PRKCD-202ENST00000394729 CYP2D6P10635 497 aa23.92■■□□□ 1.42
PRKCD-202ENST00000394729 PHKBQ93100 1093 aa23.92■■□□□ 1.42
PRKCD-202ENST00000394729 SYCE3A1L190 88 aa23.92■■□□□ 1.42
PRKCD-202ENST00000394729 IFIT3O14879 490 aaKnown RBP23.92■■□□□ 1.42
PRKCD-202ENST00000394729 PFKFB2O60825 505 aa23.92■■□□□ 1.42
PRKCD-202ENST00000394729 TMEM67Q5HYA8 995 aa23.92■■□□□ 1.42
PRKCD-202ENST00000394729 MXD3Q9BW11 206 aa23.92■■□□□ 1.42
PRKCD-202ENST00000394729 MTMR7Q9Y216 660 aa23.92■■□□□ 1.42
PRKCD-202ENST00000394729 UBR3Q6ZT12 1888 aa23.92■■□□□ 1.42
PRKCD-202ENST00000394729 XDHP47989 1333 aa23.92■■□□□ 1.42
PRKCD-202ENST00000394729 USP17L12C9JPN9 530 aa23.91■■□□□ 1.42
PRKCD-202ENST00000394729 USP17L21D6R901 530 aa23.91■■□□□ 1.42
PRKCD-202ENST00000394729 RANBP6O60518 1105 aaKnown RBP23.91■■□□□ 1.42
PRKCD-202ENST00000394729 DOK7Q18PE1 504 aa23.91■■□□□ 1.42
PRKCD-202ENST00000394729 SKOR2Q2VWA4 1001 aaPredicted RBP23.91■■□□□ 1.42
PRKCD-202ENST00000394729 NUP133Q8WUM0 1156 aa23.91■■□□□ 1.42
PRKCD-202ENST00000394729 RIOK1Q9BRS2 568 aaKnown RBP23.91■■□□□ 1.42
PRKCD-202ENST00000394729 GGA1Q9UJY5 639 aa23.91■■□□□ 1.42
PRKCD-202ENST00000394729 ZNF831Q5JPB2 1677 aa23.9■■□□□ 1.42
PRKCD-202ENST00000394729 PPARAQ07869 468 aa23.9■■□□□ 1.42
PRKCD-202ENST00000394729 AKT1S1Q96B36 256 aa23.9■■□□□ 1.42
PRKCD-202ENST00000394729 ZSCAN23Q3MJ62 389 aa23.89■■□□□ 1.42
PRKCD-202ENST00000394729 AKNAD1Q5T1N1 836 aa23.89■■□□□ 1.42
PRKCD-202ENST00000394729 PNPLA7Q6ZV29 1317 aa23.89■■□□□ 1.42
PRKCD-202ENST00000394729 CHRNA5P30532 468 aa23.89■■□□□ 1.41
PRKCD-202ENST00000394729 RTN4Q9NQC3 1192 aaKnown RBP23.89■■□□□ 1.41
PRKCD-202ENST00000394729 HPS5Q9UPZ3 1129 aa23.89■■□□□ 1.41
PRKCD-202ENST00000394729 PARP3Q9Y6F1 533 aa23.89■■□□□ 1.41
PRKCD-202ENST00000394729 ANGEL1Q9UNK9 670 aaKnown RBP23.88■■□□□ 1.41
PRKCD-202ENST00000394729 PLSCR1O15162 318 aa23.88■■□□□ 1.41
PRKCD-202ENST00000394729 LDHBP07195 334 aaKnown RBP23.88■■□□□ 1.41
PRKCD-202ENST00000394729 CRY2Q49AN0 593 aa23.88■■□□□ 1.41
PRKCD-202ENST00000394729 NMT2O60551 498 aa23.88■■□□□ 1.41
PRKCD-202ENST00000394729 XRCC6P12956 609 aaKnown RBP eCLIP23.88■■□□□ 1.41
PRKCD-202ENST00000394729 FAM47AQ5JRC9 791 aa23.88■■□□□ 1.41
PRKCD-202ENST00000394729 NLGN1Q8N2Q7 840 aa23.88■■□□□ 1.41
PRKCD-202ENST00000394729 ALDH8A1Q9H2A2 487 aaPredicted RBP23.88■■□□□ 1.41
PRKCD-202ENST00000394729 SAP30BPQ9UHR5 308 aaKnown RBP23.88■■□□□ 1.41
PRKCD-202ENST00000394729 MYH13Q9UKX3 1938 aa23.87■■□□□ 1.41
PRKCD-202ENST00000394729 PPEF1O14829 653 aaPredicted RBP23.87■■□□□ 1.41
PRKCD-202ENST00000394729 PIBF1Q8WXW3 757 aa23.87■■□□□ 1.41
PRKCD-202ENST00000394729 hCG_1642624A0A1W2PR95 340 aa23.87■■□□□ 1.41
PRKCD-202ENST00000394729 POLR3DP05423 398 aaPredicted RBP23.87■■□□□ 1.41
PRKCD-202ENST00000394729 USP17L8P0C7I0 530 aa23.87■■□□□ 1.41
PRKCD-202ENST00000394729 RNF214Q8ND24 703 aa23.87■■□□□ 1.41
PRKCD-202ENST00000394729 TBC1D16Q8TBP0 767 aa23.87■■□□□ 1.41
PRKCD-202ENST00000394729 PDCP20941 246 aa23.86■■□□□ 1.41
PRKCD-202ENST00000394729 CDC27P30260 824 aa23.86■■□□□ 1.41
PRKCD-202ENST00000394729 METAP2P50579 478 aaKnown RBP eCLIP23.86■■□□□ 1.41
PRKCD-202ENST00000394729 GTF2IP78347 998 aa23.86■■□□□ 1.41
PRKCD-202ENST00000394729 ZNF804AQ7Z570 1209 aa23.86■■□□□ 1.41
PRKCD-202ENST00000394729 CD209Q9NNX6 404 aa23.86■■□□□ 1.41
PRKCD-202ENST00000394729 BAZ2AQ9UIF9 1905 aaKnown RBP23.86■■□□□ 1.41
PRKCD-202ENST00000394729 FDPSP14324 419 aaKnown RBP23.86■■□□□ 1.41
PRKCD-202ENST00000394729 MCM9Q9NXL9 1143 aa23.86■■□□□ 1.41
PRKCD-202ENST00000394729 ORC3Q9UBD5 711 aaPredicted RBP23.85■■□□□ 1.41
PRKCD-202ENST00000394729 BAZ2BQ9UIF8 2168 aaKnown RBP23.85■■□□□ 1.41
PRKCD-202ENST00000394729 COL24A1Q17RW2 1714 aa23.85■■□□□ 1.41
PRKCD-202ENST00000394729 MFSD14BQ5SR56 506 aa23.85■■□□□ 1.41
PRKCD-202ENST00000394729 AGXT2Q9BYV1 514 aa23.85■■□□□ 1.41
PRKCD-202ENST00000394729 SH3RF3Q8TEJ3 882 aaPredicted RBP23.84■■□□□ 1.41
PRKCD-202ENST00000394729 LEMD3Q9Y2U8 911 aa23.84■■□□□ 1.41
PRKCD-202ENST00000394729 SH2B2O14492 632 aaPredicted RBP23.84■■□□□ 1.41
PRKCD-202ENST00000394729 USP5P45974 858 aa23.84■■□□□ 1.41
PRKCD-202ENST00000394729 APOA5Q6Q788 366 aa23.84■■□□□ 1.41
PRKCD-202ENST00000394729 TTC6Q86TZ1 520 aa23.84■■□□□ 1.41
PRKCD-202ENST00000394729 IL27Q8NEV9 243 aa23.84■■□□□ 1.41
PRKCD-202ENST00000394729 ZNF274Q96GC6 653 aaPredicted RBP23.84■■□□□ 1.41
PRKCD-202ENST00000394729 KCNQ5Q9NR82 932 aa23.84■■□□□ 1.41
PRKCD-202ENST00000394729 ATP6V1DQ9Y5K8 247 aa23.84■■□□□ 1.41
PRKCD-202ENST00000394729 ARAP2Q8WZ64 1704 aa23.84■■□□□ 1.41
PRKCD-202ENST00000394729 CCDC69A6NI79 296 aa23.83■■□□□ 1.41
PRKCD-202ENST00000394729 G3V3G9 751 aa23.83■■□□□ 1.41
PRKCD-202ENST00000394729 RGL2O15211 777 aa23.83■■□□□ 1.41
PRKCD-202ENST00000394729 DCAF8Q5TAQ9 597 aa23.83■■□□□ 1.41
PRKCD-202ENST00000394729 MAPKAPK5Q8IW41 473 aa23.83■■□□□ 1.41
PRKCD-202ENST00000394729 IGDCC4Q8TDY8 1250 aa23.83■■□□□ 1.41
PRKCD-202ENST00000394729 TGFBRAP1Q8WUH2 860 aa23.83■■□□□ 1.41
PRKCD-202ENST00000394729 DYNLL2Q96FJ2 89 aa23.83■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms