RNA–Protein interactions for RNA: ENST00000393540.7

CCDC110-202, Transcript of coiled-coil domain containing 110, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC110, Length 2,722 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC110-202ENST00000393540 TPTE2Q6XPS3 522 aa4.48□□□□□ -1.69
CCDC110-202ENST00000393540 NSUN7Q8NE18 718 aaKnown RBP4.48□□□□□ -1.69
CCDC110-202ENST00000393540 RIOK1Q9BRS2 568 aaKnown RBP4.48□□□□□ -1.69
CCDC110-202ENST00000393540 NCOA5Q9HCD5 579 aaKnown RBP4.48□□□□□ -1.69
CCDC110-202ENST00000393540 SMC3Q9UQE7 1217 aa4.48□□□□□ -1.69
CCDC110-202ENST00000393540 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.48□□□□□ -1.69
CCDC110-202ENST00000393540 ZMYM6O95789 1325 aa4.48□□□□□ -1.69
CCDC110-202ENST00000393540 PNPLA7Q6ZV29 1317 aa4.48□□□□□ -1.69
CCDC110-202ENST00000393540 DUOX1Q9NRD9 1551 aa4.47□□□□□ -1.69
CCDC110-202ENST00000393540 KLRG2A4D1S0 409 aaPredicted RBP4.47□□□□□ -1.69
CCDC110-202ENST00000393540 PATL2C9JE40 543 aaKnown RBP4.47□□□□□ -1.69
CCDC110-202ENST00000393540 MBD4O95243 580 aa4.47□□□□□ -1.69
CCDC110-202ENST00000393540 RFC4P35249 363 aa4.47□□□□□ -1.69
CCDC110-202ENST00000393540 SLC15A2Q16348 729 aa4.47□□□□□ -1.69
CCDC110-202ENST00000393540 SKOR2Q2VWA4 1001 aaPredicted RBP4.47□□□□□ -1.69
CCDC110-202ENST00000393540 FOXD4L6Q3SYB3 417 aaPredicted RBP4.47□□□□□ -1.69
CCDC110-202ENST00000393540 FAM173BQ6P4H8 233 aa4.47□□□□□ -1.69
CCDC110-202ENST00000393540 FOXD4L3Q6VB84 417 aaPredicted RBP4.47□□□□□ -1.69
CCDC110-202ENST00000393540 IFNL3Q8IZI9 196 aa4.47□□□□□ -1.69
CCDC110-202ENST00000393540 IGDCC4Q8TDY8 1250 aa4.47□□□□□ -1.69
CCDC110-202ENST00000393540 NLRP3Q96P20 1036 aa4.47□□□□□ -1.69
CCDC110-202ENST00000393540 GPR101Q96P66 508 aaPredicted RBP4.47□□□□□ -1.69
CCDC110-202ENST00000393540 PANK2Q9BZ23 570 aa4.47□□□□□ -1.69
CCDC110-202ENST00000393540 TFCP2L1Q9NZI6 479 aa4.47□□□□□ -1.69
CCDC110-202ENST00000393540 MYH2Q9UKX2 1941 aa4.47□□□□□ -1.69
CCDC110-202ENST00000393540 CCDC88AQ3V6T2 1871 aa4.47□□□□□ -1.69
CCDC110-202ENST00000393540 RGPD3A6NKT7 1758 aaPredicted RBP4.47□□□□□ -1.69
CCDC110-202ENST00000393540 LAMB1P07942 1786 aa4.47□□□□□ -1.69
CCDC110-202ENST00000393540 RGPD4Q7Z3J3 1758 aa4.47□□□□□ -1.69
CCDC110-202ENST00000393540 HMGB1P09429 215 aaKnown RBP4.47□□□□□ -1.69
CCDC110-202ENST00000393540 HSP90B1P14625 803 aaKnown RBP4.47□□□□□ -1.69
CCDC110-202ENST00000393540 DYNLL1P63167 89 aaKnown RBP4.47□□□□□ -1.69
CCDC110-202ENST00000393540 HTRA3P83110 453 aa4.47□□□□□ -1.69
CCDC110-202ENST00000393540 DNM1Q05193 864 aaKnown RBP4.47□□□□□ -1.69
CCDC110-202ENST00000393540 CTDSPL2Q05D32 466 aa4.47□□□□□ -1.69
CCDC110-202ENST00000393540 RESTQ13127 1097 aa4.47□□□□□ -1.69
CCDC110-202ENST00000393540 COL23A1Q86Y22 540 aaPredicted RBP4.47□□□□□ -1.69
CCDC110-202ENST00000393540 ZNF274Q96GC6 653 aaPredicted RBP4.47□□□□□ -1.69
CCDC110-202ENST00000393540 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.47□□□□□ -1.69
CCDC110-202ENST00000393540 FAM217BQ9NTX9 383 aaPredicted RBP4.47□□□□□ -1.69
CCDC110-202ENST00000393540 PDS5AQ29RF7 1337 aaKnown RBP4.47□□□□□ -1.69
CCDC110-202ENST00000393540 DDX60LQ5H9U9 1706 aaKnown RBP4.46□□□□□ -1.69
CCDC110-202ENST00000393540 A0A0C4DFX4 3053 aa4.46□□□□□ -1.69
CCDC110-202ENST00000393540 SH2B2O14492 632 aaPredicted RBP4.46□□□□□ -1.69
CCDC110-202ENST00000393540 PRC1O43663 620 aa4.46□□□□□ -1.69
CCDC110-202ENST00000393540 PPFIA3O75145 1194 aa4.46□□□□□ -1.69
CCDC110-202ENST00000393540 SERPINB2P05120 415 aa4.46□□□□□ -1.69
CCDC110-202ENST00000393540 YBX3P16989 372 aaKnown RBP eCLIP4.46□□□□□ -1.69
CCDC110-202ENST00000393540 ZNF445P59923 1031 aa4.46□□□□□ -1.69
CCDC110-202ENST00000393540 CCT2P78371 535 aaKnown RBP4.46□□□□□ -1.69
CCDC110-202ENST00000393540 GPSM2P81274 684 aa4.46□□□□□ -1.69
CCDC110-202ENST00000393540 GRAPQ13588 217 aa4.46□□□□□ -1.69
CCDC110-202ENST00000393540 ZSCAN23Q3MJ62 389 aa4.46□□□□□ -1.69
CCDC110-202ENST00000393540 ZSCAN25Q6NSZ9 544 aa4.46□□□□□ -1.69
CCDC110-202ENST00000393540 MIGA1Q8NAN2 632 aa4.46□□□□□ -1.69
CCDC110-202ENST00000393540 GRAPLQ8TC17 118 aaPredicted RBP4.46□□□□□ -1.69
CCDC110-202ENST00000393540 NSUN4Q96CB9 384 aaKnown RBP4.46□□□□□ -1.69
CCDC110-202ENST00000393540 STK32BQ9NY57 414 aa4.46□□□□□ -1.69
CCDC110-202ENST00000393540 CTNNA3Q9UI47 895 aa4.46□□□□□ -1.69
CCDC110-202ENST00000393540 WDR19Q8NEZ3 1342 aa4.46□□□□□ -1.7
CCDC110-202ENST00000393540 LOC100996750A0A140TA64 210 aa4.46□□□□□ -1.7
CCDC110-202ENST00000393540 UBE2Q2LH0YL09 131 aa4.46□□□□□ -1.7
CCDC110-202ENST00000393540 ZNF213O14771 459 aa4.46□□□□□ -1.7
CCDC110-202ENST00000393540 CYP7A1P22680 504 aa4.46□□□□□ -1.7
CCDC110-202ENST00000393540 HOXA10P31260 410 aaPredicted RBP4.46□□□□□ -1.7
CCDC110-202ENST00000393540 MECOMQ03112 1051 aa4.46□□□□□ -1.7
CCDC110-202ENST00000393540 MAP3K12Q12852 859 aa4.46□□□□□ -1.7
CCDC110-202ENST00000393540 IMMTQ16891 758 aaKnown RBP4.46□□□□□ -1.7
CCDC110-202ENST00000393540 LRRFIP1Q32MZ4 808 aaKnown RBP4.46□□□□□ -1.7
CCDC110-202ENST00000393540 LARP1BQ659C4 914 aaKnown RBP4.46□□□□□ -1.7
CCDC110-202ENST00000393540 CAVIN1Q6NZI2 390 aaKnown RBP4.46□□□□□ -1.7
CCDC110-202ENST00000393540 C15orf52Q6ZUT6 534 aaKnown RBP4.46□□□□□ -1.7
CCDC110-202ENST00000393540 RAB11FIP4Q86YS3 637 aa4.46□□□□□ -1.7
CCDC110-202ENST00000393540 DDX11Q96FC9 970 aa4.46□□□□□ -1.7
CCDC110-202ENST00000393540 SGIP1Q9BQI5 828 aa4.46□□□□□ -1.7
CCDC110-202ENST00000393540 KRTAP4-6Q9BYQ5 205 aa4.46□□□□□ -1.7
CCDC110-202ENST00000393540 LY9Q9HBG7 655 aa4.46□□□□□ -1.7
CCDC110-202ENST00000393540 DDX49Q9Y6V7 483 aaKnown RBP4.46□□□□□ -1.7
CCDC110-202ENST00000393540 CYP2D7A0A087X1C5 515 aa4.45□□□□□ -1.7
CCDC110-202ENST00000393540 PTPDC1A2A3K4 754 aa4.45□□□□□ -1.7
CCDC110-202ENST00000393540 B4E1Z4 1266 aa4.45□□□□□ -1.7
CCDC110-202ENST00000393540 PLSCR1O15162 318 aa4.45□□□□□ -1.7
CCDC110-202ENST00000393540 FGRP09769 529 aa4.45□□□□□ -1.7
CCDC110-202ENST00000393540 PTMSP20962 102 aa4.45□□□□□ -1.7
CCDC110-202ENST00000393540 PRDX5P30044 214 aa4.45□□□□□ -1.7
CCDC110-202ENST00000393540 CDC27P30260 824 aa4.45□□□□□ -1.7
CCDC110-202ENST00000393540 NTRK3Q16288 839 aa4.45□□□□□ -1.7
CCDC110-202ENST00000393540 TTC6Q86TZ1 520 aa4.45□□□□□ -1.7
CCDC110-202ENST00000393540 FERMT3Q86UX7 667 aa4.45□□□□□ -1.7
CCDC110-202ENST00000393540 CNBD1Q8NA66 436 aa4.45□□□□□ -1.7
CCDC110-202ENST00000393540 TDRD7Q8NHU6 1098 aaKnown RBP4.45□□□□□ -1.7
CCDC110-202ENST00000393540 NCOA7Q8NI08 942 aa4.45□□□□□ -1.7
CCDC110-202ENST00000393540 SDR42E1Q8WUS8 393 aa4.45□□□□□ -1.7
CCDC110-202ENST00000393540 AIDAQ96BJ3 306 aa4.45□□□□□ -1.7
CCDC110-202ENST00000393540 LLPHQ9BRT6 129 aaKnown RBP4.45□□□□□ -1.7
CCDC110-202ENST00000393540 ANKRD2Q9GZV1 360 aa4.45□□□□□ -1.7
CCDC110-202ENST00000393540 GJB4Q9NTQ9 266 aa4.45□□□□□ -1.7
CCDC110-202ENST00000393540 ZSWIM5Q9P217 1185 aa4.45□□□□□ -1.7
CCDC110-202ENST00000393540 MKRN1Q9UHC7 482 aaKnown RBP4.45□□□□□ -1.7
CCDC110-202ENST00000393540 ANAPC4Q9UJX5 808 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms