RNA–Protein interactions for RNA: ENST00000393459.5

SFXN3-202, Transcript of sideroflexin 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SFXN3, Length 3,098 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-202ENST00000393459 ENC1O14682 589 aa16.69■□□□□ 0.26
SFXN3-202ENST00000393459 TEX33O43247 280 aa16.69■□□□□ 0.26
SFXN3-202ENST00000393459 PRC1O43663 620 aa16.69■□□□□ 0.26
SFXN3-202ENST00000393459 CDC25AP30304 524 aa16.69■□□□□ 0.26
SFXN3-202ENST00000393459 GTF2A1P52655 376 aaPredicted RBP16.69■□□□□ 0.26
SFXN3-202ENST00000393459 CAPZA3Q96KX2 299 aa16.69■□□□□ 0.26
SFXN3-202ENST00000393459 FUT8Q9BYC5 575 aa16.69■□□□□ 0.26
SFXN3-202ENST00000393459 M0R2C6 588 aa16.68■□□□□ 0.26
SFXN3-202ENST00000393459 LRRC24Q50LG9 513 aa16.68■□□□□ 0.26
SFXN3-202ENST00000393459 RRP12Q5JTH9 1297 aaKnown RBP16.68■□□□□ 0.26
SFXN3-202ENST00000393459 JAKMIP3Q5VZ66 844 aa16.68■□□□□ 0.26
SFXN3-202ENST00000393459 ABCB6Q9NP58 842 aa16.68■□□□□ 0.26
SFXN3-202ENST00000393459 INTS13Q9NVM9 706 aa16.68■□□□□ 0.26
SFXN3-202ENST00000393459 RAI14Q9P0K7 980 aa16.68■□□□□ 0.26
SFXN3-202ENST00000393459 MAPK8IP1Q9UQF2 711 aa16.68■□□□□ 0.26
SFXN3-202ENST00000393459 NFAT5O94916 1531 aa16.68■□□□□ 0.26
SFXN3-202ENST00000393459 A1BGP04217 495 aa16.68■□□□□ 0.26
SFXN3-202ENST00000393459 PRR29P0C7W0 189 aa16.68■□□□□ 0.26
SFXN3-202ENST00000393459 CCT6AP40227 531 aaKnown RBP16.68■□□□□ 0.26
SFXN3-202ENST00000393459 CHMP4BP1P59074 171 aa16.68■□□□□ 0.26
SFXN3-202ENST00000393459 FMR1Q06787 632 aaKnown RBP eCLIP16.68■□□□□ 0.26
SFXN3-202ENST00000393459 NAA16Q6N069 864 aaPredicted RBP16.68■□□□□ 0.26
SFXN3-202ENST00000393459 ACRBPQ8NEB7 543 aa16.68■□□□□ 0.26
SFXN3-202ENST00000393459 ZKSCAN3Q9BRR0 538 aa16.68■□□□□ 0.26
SFXN3-202ENST00000393459 PAG1Q9NWQ8 432 aa16.68■□□□□ 0.26
SFXN3-202ENST00000393459 IMPACTQ9P2X3 320 aa16.68■□□□□ 0.26
SFXN3-202ENST00000393459 LOC102724159A0A0B4J2E5 919 aa16.68■□□□□ 0.26
SFXN3-202ENST00000393459 PWP2Q15269 919 aaKnown RBP16.68■□□□□ 0.26
SFXN3-202ENST00000393459 NFXL1Q6ZNB6 911 aa16.68■□□□□ 0.26
SFXN3-202ENST00000393459 DHX16O60231 1041 aaKnown RBP16.67■□□□□ 0.26
SFXN3-202ENST00000393459 ZC3H6P61129 1189 aaKnown RBP16.67■□□□□ 0.26
SFXN3-202ENST00000393459 PTPN12Q05209 780 aaKnown RBP16.67■□□□□ 0.26
SFXN3-202ENST00000393459 NCAPH2Q6IBW4 605 aa16.67■□□□□ 0.26
SFXN3-202ENST00000393459 RALYLQ86SE5 291 aaKnown RBP16.67■□□□□ 0.26
SFXN3-202ENST00000393459 PUS3Q9BZE2 481 aaKnown RBP16.67■□□□□ 0.26
SFXN3-202ENST00000393459 KCNJ14Q9UNX9 436 aa16.67■□□□□ 0.26
SFXN3-202ENST00000393459 ZSCAN12O43309 604 aa16.67■□□□□ 0.26
SFXN3-202ENST00000393459 DDX58O95786 925 aaKnown RBP16.67■□□□□ 0.26
SFXN3-202ENST00000393459 IFIT1P09914 478 aaKnown RBP16.67■□□□□ 0.26
SFXN3-202ENST00000393459 CCDC158Q5M9N0 1113 aa16.66■□□□□ 0.26
SFXN3-202ENST00000393459 SHC4Q6S5L8 630 aa16.66■□□□□ 0.26
SFXN3-202ENST00000393459 USP49Q70CQ1 688 aa16.66■□□□□ 0.26
SFXN3-202ENST00000393459 GOLGA1Q92805 767 aa16.66■□□□□ 0.26
SFXN3-202ENST00000393459 ALG1Q9BT22 464 aa16.66■□□□□ 0.26
SFXN3-202ENST00000393459 C1orf167Q5SNV9 1468 aa16.66■□□□□ 0.26
SFXN3-202ENST00000393459 USP42Q9H9J4 1324 aaKnown RBP16.66■□□□□ 0.26
SFXN3-202ENST00000393459 LTN1O94822 1766 aa16.66■□□□□ 0.26
SFXN3-202ENST00000393459 NEURL1BA8MQ27 555 aa16.66■□□□□ 0.26
SFXN3-202ENST00000393459 GCKRQ14397 625 aa16.66■□□□□ 0.26
SFXN3-202ENST00000393459 VPS37DQ86XT2 251 aa16.66■□□□□ 0.26
SFXN3-202ENST00000393459 OSBP2Q969R2 916 aa16.66■□□□□ 0.26
SFXN3-202ENST00000393459 TUBGCP6Q96RT7 1819 aa16.66■□□□□ 0.26
SFXN3-202ENST00000393459 POLR2DO15514 142 aaKnown RBP16.66■□□□□ 0.26
SFXN3-202ENST00000393459 BMP6P22004 513 aa16.66■□□□□ 0.26
SFXN3-202ENST00000393459 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.66■□□□□ 0.26
SFXN3-202ENST00000393459 KIF1AQ12756 1690 aa16.66■□□□□ 0.26
SFXN3-202ENST00000393459 SRLQ86TD4 932 aa16.65■□□□□ 0.26
SFXN3-202ENST00000393459 KCNG4Q8TDN1 519 aa16.65■□□□□ 0.26
SFXN3-202ENST00000393459 ZBTB3Q9H5J0 574 aa16.65■□□□□ 0.26
SFXN3-202ENST00000393459 RTEL1Q9NZ71 1219 aa16.65■□□□□ 0.26
SFXN3-202ENST00000393459 TRIM10Q9UDY6 481 aa16.65■□□□□ 0.26
SFXN3-202ENST00000393459 VSNL1P62760 191 aa16.65■□□□□ 0.26
SFXN3-202ENST00000393459 KRT28Q7Z3Y7 464 aa16.65■□□□□ 0.26
SFXN3-202ENST00000393459 FBXO18Q8NFZ0 1043 aa16.65■□□□□ 0.26
SFXN3-202ENST00000393459 EHD4Q9H223 541 aa16.65■□□□□ 0.26
SFXN3-202ENST00000393459 MAST3O60307 1309 aa16.65■□□□□ 0.26
SFXN3-202ENST00000393459 SRGAP2O75044 1071 aa16.64■□□□□ 0.25
SFXN3-202ENST00000393459 ATF3P18847 181 aa16.64■□□□□ 0.25
SFXN3-202ENST00000393459 HSP90B2PQ58FF3 399 aa16.64■□□□□ 0.25
SFXN3-202ENST00000393459 METTL16Q86W50 562 aaKnown RBP16.64■□□□□ 0.25
SFXN3-202ENST00000393459 VSTM4Q8IW00 320 aa16.64■□□□□ 0.25
SFXN3-202ENST00000393459 FAM208AQ9UK61 1670 aaKnown RBP16.64■□□□□ 0.25
SFXN3-202ENST00000393459 GCP02774 474 aa16.64■□□□□ 0.25
SFXN3-202ENST00000393459 AXDND1Q5T1B0 1012 aaPredicted RBP16.64■□□□□ 0.25
SFXN3-202ENST00000393459 PACS2Q86VP3 889 aa16.64■□□□□ 0.25
SFXN3-202ENST00000393459 CWC15Q9P013 229 aaKnown RBP16.64■□□□□ 0.25
SFXN3-202ENST00000393459 MRFAP1Q9Y605 127 aa16.64■□□□□ 0.25
SFXN3-202ENST00000393459 NEDD4P46934 1319 aa16.64■□□□□ 0.25
SFXN3-202ENST00000393459 PHLPP2Q6ZVD8 1323 aa16.64■□□□□ 0.25
SFXN3-202ENST00000393459 PHRF1Q9P1Y6 1649 aaKnown RBP16.64■□□□□ 0.25
SFXN3-202ENST00000393459 DCCP43146 1447 aa16.64■□□□□ 0.25
SFXN3-202ENST00000393459 GPR161Q8N6U8 529 aaKnown RBP16.64■□□□□ 0.25
SFXN3-202ENST00000393459 KBTBD3Q8NAB2 608 aa16.64■□□□□ 0.25
SFXN3-202ENST00000393459 NOA1Q8NC60 698 aaKnown RBP16.64■□□□□ 0.25
SFXN3-202ENST00000393459 HDAC6Q9UBN7 1215 aa16.64■□□□□ 0.25
SFXN3-202ENST00000393459 RNMTO43148 476 aaKnown RBP16.63■□□□□ 0.25
SFXN3-202ENST00000393459 ATP5JP18859 108 aa16.63■□□□□ 0.25
SFXN3-202ENST00000393459 ADORA1P30542 326 aa16.63■□□□□ 0.25
SFXN3-202ENST00000393459 MICALL1Q8N3F8 863 aa16.63■□□□□ 0.25
SFXN3-202ENST00000393459 PSMB7Q99436 277 aa16.63■□□□□ 0.25
SFXN3-202ENST00000393459 CACNA1FO60840 1977 aa16.63■□□□□ 0.25
SFXN3-202ENST00000393459 SLIT3O75094 1523 aa16.63■□□□□ 0.25
SFXN3-202ENST00000393459 ARHGAP6O43182 974 aa16.63■□□□□ 0.25
SFXN3-202ENST00000393459 ACTN2P35609 894 aa16.63■□□□□ 0.25
SFXN3-202ENST00000393459 ANKRD13DQ6ZTN6 518 aa16.63■□□□□ 0.25
SFXN3-202ENST00000393459 SLC35F6Q8N357 371 aa16.63■□□□□ 0.25
SFXN3-202ENST00000393459 SLC26A6Q9BXS9 759 aa16.63■□□□□ 0.25
SFXN3-202ENST00000393459 SEC31BQ9NQW1 1179 aa16.63■□□□□ 0.25
SFXN3-202ENST00000393459 SERTAD1Q9UHV2 236 aa16.63■□□□□ 0.25
SFXN3-202ENST00000393459 FGAP02671 866 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms