RNA–Protein interactions for RNA: ENST00000393120.6

MKS1-203, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 1,926 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-203ENST00000393120 PRKAB2O43741 272 aa16.68■□□□□ 0.26
MKS1-203ENST00000393120 CYP7A1P22680 504 aa16.68■□□□□ 0.26
MKS1-203ENST00000393120 FOSBP53539 338 aa16.68■□□□□ 0.26
MKS1-203ENST00000393120 TYRO3Q06418 890 aa16.68■□□□□ 0.26
MKS1-203ENST00000393120 TMEM67Q5HYA8 995 aa16.68■□□□□ 0.26
MKS1-203ENST00000393120 RNF41Q9H4P4 317 aaPredicted RBP16.68■□□□□ 0.26
MKS1-203ENST00000393120 SRP68Q9UHB9 627 aaKnown RBP16.68■□□□□ 0.26
MKS1-203ENST00000393120 ANAPC4Q9UJX5 808 aa16.68■□□□□ 0.26
MKS1-203ENST00000393120 COL24A1Q17RW2 1714 aa16.68■□□□□ 0.26
MKS1-203ENST00000393120 BTAF1O14981 1849 aa16.68■□□□□ 0.26
MKS1-203ENST00000393120 CTAGE5O15320 804 aa16.68■□□□□ 0.26
MKS1-203ENST00000393120 ZBTB43O43298 467 aa16.68■□□□□ 0.26
MKS1-203ENST00000393120 ONECUT3O60422 494 aaPredicted RBP16.68■□□□□ 0.26
MKS1-203ENST00000393120 MSNP26038 577 aaKnown RBP16.68■□□□□ 0.26
MKS1-203ENST00000393120 TDO2P48775 406 aa16.68■□□□□ 0.26
MKS1-203ENST00000393120 GUCY1B3Q02153 619 aa16.68■□□□□ 0.26
MKS1-203ENST00000393120 CTDSPL2Q05D32 466 aa16.68■□□□□ 0.26
MKS1-203ENST00000393120 CAMK4Q16566 473 aa16.68■□□□□ 0.26
MKS1-203ENST00000393120 POLR3EQ9NVU0 708 aa16.68■□□□□ 0.26
MKS1-203ENST00000393120 TACC3Q9Y6A5 838 aa16.68■□□□□ 0.26
MKS1-203ENST00000393120 CAVIN2O95810 425 aa16.67■□□□□ 0.26
MKS1-203ENST00000393120 RCAN1P53805 252 aa16.67■□□□□ 0.26
MKS1-203ENST00000393120 NTRK3Q16288 839 aa16.67■□□□□ 0.26
MKS1-203ENST00000393120 TMTC2Q8N394 836 aa16.67■□□□□ 0.26
MKS1-203ENST00000393120 FAM200AQ8TCP9 573 aa16.67■□□□□ 0.26
MKS1-203ENST00000393120 ARHGEF1Q92888 912 aaKnown RBP16.67■□□□□ 0.26
MKS1-203ENST00000393120 ZKSCAN5Q9Y2L8 839 aa16.67■□□□□ 0.26
MKS1-203ENST00000393120 MRVI1Q9Y6F6 885 aa16.67■□□□□ 0.26
MKS1-203ENST00000393120 A0A1B0GUL6 1792 aa16.67■□□□□ 0.26
MKS1-203ENST00000393120 MYH15Q9Y2K3 1946 aa16.67■□□□□ 0.26
MKS1-203ENST00000393120 MAGEB6P1A0A0J9YX57 407 aa16.66■□□□□ 0.26
MKS1-203ENST00000393120 A0A1W2PQ27 194 aa16.66■□□□□ 0.26
MKS1-203ENST00000393120 A0A1W2PQ64 194 aa16.66■□□□□ 0.26
MKS1-203ENST00000393120 A0A1W2PQD8 194 aa16.66■□□□□ 0.26
MKS1-203ENST00000393120 IFIT3O14879 490 aaKnown RBP16.66■□□□□ 0.26
MKS1-203ENST00000393120 PPFIA3O75145 1194 aa16.66■□□□□ 0.26
MKS1-203ENST00000393120 YEATS4O95619 227 aa16.66■□□□□ 0.26
MKS1-203ENST00000393120 VPS37DQ86XT2 251 aa16.66■□□□□ 0.26
MKS1-203ENST00000393120 CCAR1Q8IX12 1150 aaKnown RBP16.66■□□□□ 0.26
MKS1-203ENST00000393120 GJD4Q96KN9 370 aaPredicted RBP16.66■□□□□ 0.26
MKS1-203ENST00000393120 RIOK1Q9BRS2 568 aaKnown RBP16.66■□□□□ 0.26
MKS1-203ENST00000393120 FAM217BQ9NTX9 383 aaPredicted RBP16.66■□□□□ 0.26
MKS1-203ENST00000393120 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.66■□□□□ 0.26
MKS1-203ENST00000393120 RAI14Q9P0K7 980 aa16.66■□□□□ 0.26
MKS1-203ENST00000393120 USP25Q9UHP3 1055 aa16.66■□□□□ 0.26
MKS1-203ENST00000393120 COL1A1P02452 1464 aaPredicted RBP16.66■□□□□ 0.26
MKS1-203ENST00000393120 STK36Q9NRP7 1315 aa16.66■□□□□ 0.26
MKS1-203ENST00000393120 C4AP0C0L4 1744 aa16.66■□□□□ 0.26
MKS1-203ENST00000393120 C4BP0C0L5 1744 aa16.66■□□□□ 0.26
MKS1-203ENST00000393120 ZNF500O60304 480 aaPredicted RBP16.66■□□□□ 0.26
MKS1-203ENST00000393120 IGSF3O75054 1194 aa16.66■□□□□ 0.26
MKS1-203ENST00000393120 CDC27P30260 824 aa16.66■□□□□ 0.26
MKS1-203ENST00000393120 TM4SF1P30408 202 aa16.66■□□□□ 0.26
MKS1-203ENST00000393120 KIF23Q02241 960 aaPredicted RBP16.66■□□□□ 0.26
MKS1-203ENST00000393120 CEBPZQ03701 1054 aaKnown RBP16.66■□□□□ 0.26
MKS1-203ENST00000393120 SART3Q15020 963 aaKnown RBP16.66■□□□□ 0.26
MKS1-203ENST00000393120 ADALQ6DHV7 355 aa16.66■□□□□ 0.26
MKS1-203ENST00000393120 NFXL1Q6ZNB6 911 aa16.66■□□□□ 0.26
MKS1-203ENST00000393120 ADGRA1Q86SQ6 560 aa16.66■□□□□ 0.26
MKS1-203ENST00000393120 LINC00301Q8NCQ3 95 aa16.66■□□□□ 0.26
MKS1-203ENST00000393120 ENGASEQ8NFI3 743 aa16.66■□□□□ 0.26
MKS1-203ENST00000393120 KCNG4Q8TDN1 519 aa16.66■□□□□ 0.26
MKS1-203ENST00000393120 FTOQ9C0B1 505 aaKnown RBP eCLIP16.66■□□□□ 0.26
MKS1-203ENST00000393120 SENP2Q9HC62 589 aa16.66■□□□□ 0.26
MKS1-203ENST00000393120 INCENPQ9NQS7 918 aa16.66■□□□□ 0.26
MKS1-203ENST00000393120 ABCF2Q9UG63 623 aa16.66■□□□□ 0.26
MKS1-203ENST00000393120 SLC12A7Q9Y666 1083 aa16.66■□□□□ 0.26
MKS1-203ENST00000393120 WTIPA6NIX2 430 aaPredicted RBP16.65■□□□□ 0.26
MKS1-203ENST00000393120 ADCY5O95622 1261 aa16.65■□□□□ 0.26
MKS1-203ENST00000393120 PPARAQ07869 468 aa16.65■□□□□ 0.26
MKS1-203ENST00000393120 SNW1Q13573 536 aaKnown RBP16.65■□□□□ 0.26
MKS1-203ENST00000393120 MYSM1Q5VVJ2 828 aa16.65■□□□□ 0.26
MKS1-203ENST00000393120 OTUD7BQ6GQQ9 843 aa16.65■□□□□ 0.26
MKS1-203ENST00000393120 SMIM5Q71RC9 77 aa16.65■□□□□ 0.26
MKS1-203ENST00000393120 RAB11FIP4Q86YS3 637 aa16.65■□□□□ 0.26
MKS1-203ENST00000393120 MIGA1Q8NAN2 632 aa16.65■□□□□ 0.26
MKS1-203ENST00000393120 ALG1Q9BT22 464 aa16.65■□□□□ 0.26
MKS1-203ENST00000393120 BRIP1Q9BX63 1249 aa16.65■□□□□ 0.26
MKS1-203ENST00000393120 IQSEC3Q9UPP2 1182 aaPredicted RBP16.65■□□□□ 0.26
MKS1-203ENST00000393120 CCDC69A6NI79 296 aa16.64■□□□□ 0.26
MKS1-203ENST00000393120 GOLGA8AA7E2F4 631 aa16.64■□□□□ 0.26
MKS1-203ENST00000393120 FAM160A1Q05DH4 1040 aa16.64■□□□□ 0.26
MKS1-203ENST00000393120 SYNE3Q6ZMZ3 975 aa16.64■□□□□ 0.26
MKS1-203ENST00000393120 CCDC73Q6ZRK6 1079 aa16.64■□□□□ 0.26
MKS1-203ENST00000393120 PCP11498 1178 aaKnown RBP16.64■□□□□ 0.25
MKS1-203ENST00000393120 IARSP41252 1262 aaKnown RBP16.64■□□□□ 0.25
MKS1-203ENST00000393120 ME1P48163 572 aa16.64■□□□□ 0.25
MKS1-203ENST00000393120 SASS6Q6UVJ0 657 aa16.64■□□□□ 0.25
MKS1-203ENST00000393120 MICU3Q86XE3 530 aa16.64■□□□□ 0.25
MKS1-203ENST00000393120 CKAP2LQ8IYA6 745 aa16.64■□□□□ 0.25
MKS1-203ENST00000393120 PCDHA7Q9UN72 937 aa16.64■□□□□ 0.25
MKS1-203ENST00000393120 IFNAR1P17181 557 aa16.63■□□□□ 0.25
MKS1-203ENST00000393120 HIBADHP31937 336 aaKnown RBP16.63■□□□□ 0.25
MKS1-203ENST00000393120 TRAPPC3LQ5T215 181 aa16.63■□□□□ 0.25
MKS1-203ENST00000393120 AEBP2Q6ZN18 517 aaPredicted RBP16.63■□□□□ 0.25
MKS1-203ENST00000393120 WASF1Q92558 559 aa16.63■□□□□ 0.25
MKS1-203ENST00000393120 GOLPH3LQ9H4A5 285 aa16.63■□□□□ 0.25
MKS1-203ENST00000393120 LY75O60449 1722 aa16.63■□□□□ 0.25
MKS1-203ENST00000393120 FGRP09769 529 aa16.62■□□□□ 0.25
MKS1-203ENST00000393120 ADRA2BP18089 450 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms