RNA–Protein interactions for RNA: ENST00000393104.6

PDCD4-202, Transcript of programmed cell death 4, humanhuman

TSL 1 (best) BASIC

Gene PDCD4, Length 3,697 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-202ENST00000393104 SPATA31A1Q5TZJ5 1347 aa13.24□□□□□ -0.29
PDCD4-202ENST00000393104 LMOD1P29536 600 aaPredicted RBP13.24□□□□□ -0.29
PDCD4-202ENST00000393104 AIMP1Q12904 312 aaKnown RBP13.24□□□□□ -0.29
PDCD4-202ENST00000393104 TC2NQ8N9U0 490 aa13.24□□□□□ -0.29
PDCD4-202ENST00000393104 FBXO18Q8NFZ0 1043 aa13.24□□□□□ -0.29
PDCD4-202ENST00000393104 METTL22Q9BUU2 404 aaPredicted RBP13.24□□□□□ -0.29
PDCD4-202ENST00000393104 KIF2AO00139 706 aaPredicted RBP13.23□□□□□ -0.29
PDCD4-202ENST00000393104 FOXN1O15353 648 aa13.23□□□□□ -0.29
PDCD4-202ENST00000393104 TFRCP02786 760 aaKnown RBP13.23□□□□□ -0.29
PDCD4-202ENST00000393104 PIP4K2AP48426 406 aaPredicted RBP13.23□□□□□ -0.29
PDCD4-202ENST00000393104 ISM2Q6H9L7 571 aa13.23□□□□□ -0.29
PDCD4-202ENST00000393104 CREBRFQ8IUR6 639 aa13.23□□□□□ -0.29
PDCD4-202ENST00000393104 COL5A3P25940 1745 aaPredicted RBP13.23□□□□□ -0.29
PDCD4-202ENST00000393104 MYSM1Q5VVJ2 828 aa13.23□□□□□ -0.29
PDCD4-202ENST00000393104 OSBP2Q969R2 916 aa13.23□□□□□ -0.29
PDCD4-202ENST00000393104 SPATA31A5Q5VU36 1347 aa13.23□□□□□ -0.29
PDCD4-202ENST00000393104 SPATA31A7Q8IWB4 1347 aa13.23□□□□□ -0.29
PDCD4-202ENST00000393104 BECN2A8MW95 431 aa13.23□□□□□ -0.29
PDCD4-202ENST00000393104 ZNF18P17022 549 aa13.23□□□□□ -0.29
PDCD4-202ENST00000393104 KIF23Q02241 960 aaPredicted RBP13.23□□□□□ -0.29
PDCD4-202ENST00000393104 SLC39A6Q13433 755 aa13.23□□□□□ -0.29
PDCD4-202ENST00000393104 MB21D2Q8IYB1 491 aaPredicted RBP13.23□□□□□ -0.29
PDCD4-202ENST00000393104 BCL9LQ86UU0 1499 aa13.22□□□□□ -0.29
PDCD4-202ENST00000393104 EFCAB8A8MWE9 144 aa13.22□□□□□ -0.29
PDCD4-202ENST00000393104 POLR3DP05423 398 aaPredicted RBP13.22□□□□□ -0.29
PDCD4-202ENST00000393104 IRX2Q9BZI1 471 aaPredicted RBP13.22□□□□□ -0.29
PDCD4-202ENST00000393104 BTG4Q9NY30 223 aa13.22□□□□□ -0.29
PDCD4-202ENST00000393104 ANKRD36CQ5JPF3 1778 aa13.22□□□□□ -0.29
PDCD4-202ENST00000393104 ABL1P00519 1130 aa13.22□□□□□ -0.29
PDCD4-202ENST00000393104 XAGE3Q8WTP9 111 aa13.22□□□□□ -0.29
PDCD4-202ENST00000393104 SENP2Q9HC62 589 aa13.22□□□□□ -0.29
PDCD4-202ENST00000393104 CMA1P23946 247 aa13.21□□□□□ -0.29
PDCD4-202ENST00000393104 CCDC73Q6ZRK6 1079 aa13.21□□□□□ -0.29
PDCD4-202ENST00000393104 TRERF1Q96PN7 1200 aa13.21□□□□□ -0.29
PDCD4-202ENST00000393104 UTP14AQ9BVJ6 771 aaKnown RBP13.21□□□□□ -0.29
PDCD4-202ENST00000393104 TEX13AQ9BXU3 409 aaPredicted RBP13.21□□□□□ -0.29
PDCD4-202ENST00000393104 ANKZF1Q9H8Y5 726 aa13.21□□□□□ -0.29
PDCD4-202ENST00000393104 MRPL44Q9H9J2 332 aaKnown RBP13.21□□□□□ -0.29
PDCD4-202ENST00000393104 YEATS4O95619 227 aa13.21□□□□□ -0.29
PDCD4-202ENST00000393104 FMR1Q06787 632 aaKnown RBP eCLIP13.21□□□□□ -0.29
PDCD4-202ENST00000393104 CCDC158Q5M9N0 1113 aa13.21□□□□□ -0.29
PDCD4-202ENST00000393104 ZNF790Q6PG37 636 aa13.21□□□□□ -0.29
PDCD4-202ENST00000393104 DNAJC2Q99543 621 aaKnown RBP13.21□□□□□ -0.29
PDCD4-202ENST00000393104 SFPQP23246 707 aaKnown RBP eCLIP13.21□□□□□ -0.3
PDCD4-202ENST00000393104 COPS6Q7L5N1 327 aa13.21□□□□□ -0.3
PDCD4-202ENST00000393104 PPP2R2CQ9Y2T4 447 aa13.21□□□□□ -0.3
PDCD4-202ENST00000393104 TACC3Q9Y6A5 838 aa13.21□□□□□ -0.3
PDCD4-202ENST00000393104 TRIM66O15016 1216 aa13.2□□□□□ -0.3
PDCD4-202ENST00000393104 HSP90B1P14625 803 aaKnown RBP13.2□□□□□ -0.3
PDCD4-202ENST00000393104 PNOCQ13519 176 aa13.2□□□□□ -0.3
PDCD4-202ENST00000393104 MTF1Q14872 753 aa13.2□□□□□ -0.3
PDCD4-202ENST00000393104 LRRFIP1Q32MZ4 808 aaKnown RBP13.2□□□□□ -0.3
PDCD4-202ENST00000393104 PARD6BQ9BYG5 372 aa13.2□□□□□ -0.3
PDCD4-202ENST00000393104 SPTLC2O15270 562 aa13.2□□□□□ -0.3
PDCD4-202ENST00000393104 SMC2O95347 1197 aa13.2□□□□□ -0.3
PDCD4-202ENST00000393104 EVA1CP58658 441 aa13.2□□□□□ -0.3
PDCD4-202ENST00000393104 MYD88Q99836 296 aa13.2□□□□□ -0.3
PDCD4-202ENST00000393104 HELLSQ9NRZ9 838 aa13.2□□□□□ -0.3
PDCD4-202ENST00000393104 FANCLQ9NW38 375 aa13.2□□□□□ -0.3
PDCD4-202ENST00000393104 CCDC66A2RUB6 948 aa13.2□□□□□ -0.3
PDCD4-202ENST00000393104 TIMM10P62072 90 aa13.2□□□□□ -0.3
PDCD4-202ENST00000393104 GRIN1Q05586 938 aa13.2□□□□□ -0.3
PDCD4-202ENST00000393104 FOXR1Q6PIV2 292 aa13.2□□□□□ -0.3
PDCD4-202ENST00000393104 FNBP4Q8N3X1 1017 aaPredicted RBP13.2□□□□□ -0.3
PDCD4-202ENST00000393104 FAM217BQ9NTX9 383 aaPredicted RBP13.2□□□□□ -0.3
PDCD4-202ENST00000393104 OAS2P29728 719 aaKnown RBP13.19□□□□□ -0.3
PDCD4-202ENST00000393104 SLC39A14Q15043 492 aa13.19□□□□□ -0.3
PDCD4-202ENST00000393104 LONRF3Q496Y0 759 aa13.19□□□□□ -0.3
PDCD4-202ENST00000393104 ZNF396Q96N95 335 aaPredicted RBP13.19□□□□□ -0.3
PDCD4-202ENST00000393104 CALCOCO1Q9P1Z2 691 aa13.19□□□□□ -0.3
PDCD4-202ENST00000393104 NAP1L2Q9ULW6 460 aaPredicted RBP13.19□□□□□ -0.3
PDCD4-202ENST00000393104 UBAP1LF5GYI3 381 aa13.19□□□□□ -0.3
PDCD4-202ENST00000393104 POLR3GO15318 223 aaPredicted RBP13.19□□□□□ -0.3
PDCD4-202ENST00000393104 HMGB1P09429 215 aaKnown RBP13.19□□□□□ -0.3
PDCD4-202ENST00000393104 GORABQ5T7V8 394 aa13.19□□□□□ -0.3
PDCD4-202ENST00000393104 FMNL2Q96PY5 1086 aa13.19□□□□□ -0.3
PDCD4-202ENST00000393104 CLIC6Q96NY7 704 aa13.19□□□□□ -0.3
PDCD4-202ENST00000393104 PNKPQ96T60 521 aa13.19□□□□□ -0.3
PDCD4-202ENST00000393104 GOLIM4O00461 696 aa13.18□□□□□ -0.3
PDCD4-202ENST00000393104 SLC3A2P08195 630 aaKnown RBP13.18□□□□□ -0.3
PDCD4-202ENST00000393104 MYL6BP14649 208 aa13.18□□□□□ -0.3
PDCD4-202ENST00000393104 NOP2P46087 812 aaKnown RBP13.18□□□□□ -0.3
PDCD4-202ENST00000393104 ANO1Q5XXA6 986 aa13.18□□□□□ -0.3
PDCD4-202ENST00000393104 RAB11FIP4Q86YS3 637 aa13.18□□□□□ -0.3
PDCD4-202ENST00000393104 SHISA4Q96DD7 197 aa13.18□□□□□ -0.3
PDCD4-202ENST00000393104 PAG1Q9NWQ8 432 aa13.18□□□□□ -0.3
PDCD4-202ENST00000393104 SBF2Q86WG5 1849 aa13.18□□□□□ -0.3
PDCD4-202ENST00000393104 ZC3H4Q9UPT8 1303 aaKnown RBP13.18□□□□□ -0.3
PDCD4-202ENST00000393104 ATP8B1O43520 1251 aa13.18□□□□□ -0.3
PDCD4-202ENST00000393104 N4BP1O75113 896 aaKnown RBP13.18□□□□□ -0.3
PDCD4-202ENST00000393104 SARSP49591 514 aaKnown RBP13.18□□□□□ -0.3
PDCD4-202ENST00000393104 SCARF1Q14162 830 aa13.18□□□□□ -0.3
PDCD4-202ENST00000393104 VPS72Q15906 364 aa13.18□□□□□ -0.3
PDCD4-202ENST00000393104 RESP18Q5W5W9 173 aa13.18□□□□□ -0.3
PDCD4-202ENST00000393104 DHX58Q96C10 678 aa13.18□□□□□ -0.3
PDCD4-202ENST00000393104 ZNF496Q96IT1 587 aaPredicted RBP13.18□□□□□ -0.3
PDCD4-202ENST00000393104 SUGCTQ9HAC7 445 aa13.18□□□□□ -0.3
PDCD4-202ENST00000393104 MYH8P13535 1937 aa13.18□□□□□ -0.3
PDCD4-202ENST00000393104 ATRNO75882 1429 aa13.18□□□□□ -0.3
PDCD4-202ENST00000393104 SMC1AQ14683 1233 aaKnown RBP13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms