RNA–Protein interactions for RNA: ENST00000393083.2

PTN-202, Transcript of pleiotrophin, humanhuman

TSL 5 BASIC

Gene PTN, Length 1,599 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-202ENST00000393083 MAST3O60307 1309 aa16.3■□□□□ 0.2
PTN-202ENST00000393083 A0A0D9SFI3 127 aa16.3■□□□□ 0.2
PTN-202ENST00000393083 ABCF2Q9UG63 623 aa16.3■□□□□ 0.2
PTN-202ENST00000393083 EPB41L2O43491 1005 aaKnown RBP16.29■□□□□ 0.2
PTN-202ENST00000393083 MCCP23508 829 aa16.29■□□□□ 0.2
PTN-202ENST00000393083 ANGEL2Q5VTE6 544 aaKnown RBP16.29■□□□□ 0.2
PTN-202ENST00000393083 SPTY2D1Q68D10 685 aaPredicted RBP16.29■□□□□ 0.2
PTN-202ENST00000393083 HHIPL2Q6UWX4 724 aa16.29■□□□□ 0.2
PTN-202ENST00000393083 KIAA1211Q6ZU35 1233 aa16.29■□□□□ 0.2
PTN-202ENST00000393083 ZNF384Q8TF68 577 aa16.29■□□□□ 0.2
PTN-202ENST00000393083 GGA3Q9NZ52 723 aa16.29■□□□□ 0.2
PTN-202ENST00000393083 PASKQ96RG2 1323 aa16.28■□□□□ 0.2
PTN-202ENST00000393083 DIXDC1Q155Q3 683 aa16.28■□□□□ 0.2
PTN-202ENST00000393083 ERICH6Q7L0X2 663 aa16.28■□□□□ 0.2
PTN-202ENST00000393083 TEKT1Q969V4 418 aa16.28■□□□□ 0.2
PTN-202ENST00000393083 ZDHHC15Q96MV8 337 aa16.28■□□□□ 0.2
PTN-202ENST00000393083 KIF2CQ99661 725 aa16.28■□□□□ 0.2
PTN-202ENST00000393083 GLIS2Q9BZE0 524 aaPredicted RBP16.28■□□□□ 0.2
PTN-202ENST00000393083 LSG1Q9H089 658 aaKnown RBP16.28■□□□□ 0.2
PTN-202ENST00000393083 ANTXR1Q9H6X2 564 aa16.28■□□□□ 0.2
PTN-202ENST00000393083 PIH1D3Q9NQM4 214 aaKnown RBP16.28■□□□□ 0.2
PTN-202ENST00000393083 PITPNM2Q9BZ72 1349 aa16.27■□□□□ 0.2
PTN-202ENST00000393083 RBM5P52756 815 aaKnown RBP eCLIP16.27■□□□□ 0.2
PTN-202ENST00000393083 MECOMQ03112 1051 aa16.27■□□□□ 0.2
PTN-202ENST00000393083 BECN1Q14457 450 aa16.27■□□□□ 0.2
PTN-202ENST00000393083 APOBEC3HQ6NTF7 200 aaKnown RBP16.27■□□□□ 0.2
PTN-202ENST00000393083 TICAM2Q86XR7 235 aa16.27■□□□□ 0.2
PTN-202ENST00000393083 DCPSQ96C86 337 aaKnown RBP16.27■□□□□ 0.2
PTN-202ENST00000393083 CDC37L1Q7L3B6 337 aa16.26■□□□□ 0.19
PTN-202ENST00000393083 NSUN4Q96CB9 384 aaKnown RBP16.26■□□□□ 0.19
PTN-202ENST00000393083 DAXXQ9UER7 740 aaPredicted RBP16.26■□□□□ 0.19
PTN-202ENST00000393083 DAGLAQ9Y4D2 1042 aa16.26■□□□□ 0.19
PTN-202ENST00000393083 GAKO14976 1311 aa16.26■□□□□ 0.19
PTN-202ENST00000393083 CCDC171Q6TFL3 1326 aa16.26■□□□□ 0.19
PTN-202ENST00000393083 TRAF5O00463 557 aa16.26■□□□□ 0.19
PTN-202ENST00000393083 FMR1Q06787 632 aaKnown RBP eCLIP16.26■□□□□ 0.19
PTN-202ENST00000393083 LRRFIP1Q32MZ4 808 aaKnown RBP16.26■□□□□ 0.19
PTN-202ENST00000393083 DLK2Q6UY11 383 aa16.26■□□□□ 0.19
PTN-202ENST00000393083 KRT26Q7Z3Y9 468 aa16.26■□□□□ 0.19
PTN-202ENST00000393083 USP48Q86UV5 1035 aa16.26■□□□□ 0.19
PTN-202ENST00000393083 DZIP1Q86YF9 867 aaKnown RBP16.26■□□□□ 0.19
PTN-202ENST00000393083 FAM163AQ96GL9 167 aaPredicted RBP16.26■□□□□ 0.19
PTN-202ENST00000393083 LRP2BPQ9P2M1 347 aa16.26■□□□□ 0.19
PTN-202ENST00000393083 ADM5C9JUS6 153 aa16.25■□□□□ 0.19
PTN-202ENST00000393083 CHGBP05060 677 aa16.25■□□□□ 0.19
PTN-202ENST00000393083 TTF1Q15361 905 aaPredicted RBP16.25■□□□□ 0.19
PTN-202ENST00000393083 SPDYE2Q495Y8 402 aa16.25■□□□□ 0.19
PTN-202ENST00000393083 TDRD3Q9H7E2 651 aaKnown RBP16.25■□□□□ 0.19
PTN-202ENST00000393083 RAI14Q9P0K7 980 aa16.25■□□□□ 0.19
PTN-202ENST00000393083 SCAF8Q9UPN6 1271 aaKnown RBP16.25■□□□□ 0.19
PTN-202ENST00000393083 MAST2Q6P0Q8 1798 aa16.25■□□□□ 0.19
PTN-202ENST00000393083 POLR2AP24928 1970 aaKnown RBP16.24■□□□□ 0.19
PTN-202ENST00000393083 CLRN2A0PK11 232 aa16.24■□□□□ 0.19
PTN-202ENST00000393083 RNF113AO15541 343 aaKnown RBP16.24■□□□□ 0.19
PTN-202ENST00000393083 MYO1BO43795 1136 aa16.24■□□□□ 0.19
PTN-202ENST00000393083 IGSF3O75054 1194 aa16.24■□□□□ 0.19
PTN-202ENST00000393083 RABEP1Q15276 862 aa16.24■□□□□ 0.19
PTN-202ENST00000393083 ZNF589Q86UQ0 364 aaPredicted RBP16.24■□□□□ 0.19
PTN-202ENST00000393083 SULF1Q8IWU6 871 aa16.24■□□□□ 0.19
PTN-202ENST00000393083 ZNF70Q9UC06 446 aaPredicted RBP16.24■□□□□ 0.19
PTN-202ENST00000393083 ZFYP08048 801 aaPredicted RBP16.23■□□□□ 0.19
PTN-202ENST00000393083 HSPA4P34932 840 aa16.23■□□□□ 0.19
PTN-202ENST00000393083 SLC4A3P48751 1232 aa16.23■□□□□ 0.19
PTN-202ENST00000393083 PTH1RQ03431 593 aa16.23■□□□□ 0.19
PTN-202ENST00000393083 MCMDC2Q4G0Z9 681 aa16.23■□□□□ 0.19
PTN-202ENST00000393083 ZMYM1Q5SVZ6 1142 aa16.23■□□□□ 0.19
PTN-202ENST00000393083 APOBEC3FQ8IUX4 373 aaKnown RBP16.23■□□□□ 0.19
PTN-202ENST00000393083 SLF2Q8IX21 1173 aa16.23■□□□□ 0.19
PTN-202ENST00000393083 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.23■□□□□ 0.19
PTN-202ENST00000393083 HELLSQ9NRZ9 838 aa16.23■□□□□ 0.19
PTN-202ENST00000393083 PALD1Q9ULE6 856 aa16.23■□□□□ 0.19
PTN-202ENST00000393083 MROH7-TTC4A0A0A0MT08 1334 aa16.23■□□□□ 0.19
PTN-202ENST00000393083 HSPA6P17066 643 aa16.22■□□□□ 0.19
PTN-202ENST00000393083 ANAPC15P60006 121 aa16.22■□□□□ 0.19
PTN-202ENST00000393083 GSTO1P78417 241 aa16.22■□□□□ 0.19
PTN-202ENST00000393083 CCDC129Q6ZRS4 1044 aa16.22■□□□□ 0.19
PTN-202ENST00000393083 HSCBQ8IWL3 235 aa16.22■□□□□ 0.19
PTN-202ENST00000393083 SEC62Q99442 399 aaKnown RBP16.22■□□□□ 0.19
PTN-202ENST00000393083 TBC1D2Q9BYX2 928 aa16.22■□□□□ 0.19
PTN-202ENST00000393083 GPR75-ASB3A0A0A6YYF3 556 aa16.21■□□□□ 0.19
PTN-202ENST00000393083 IDH1O75874 414 aaKnown RBP16.21■□□□□ 0.19
PTN-202ENST00000393083 HOXD11P31277 338 aaPredicted RBP16.21■□□□□ 0.19
PTN-202ENST00000393083 APLP1P51693 650 aa16.21■□□□□ 0.19
PTN-202ENST00000393083 SLFNL1Q499Z3 407 aa16.21■□□□□ 0.19
PTN-202ENST00000393083 CST9Q5W186 159 aa16.21■□□□□ 0.19
PTN-202ENST00000393083 ZSCAN25Q6NSZ9 544 aa16.21■□□□□ 0.19
PTN-202ENST00000393083 CDC42EP5Q6NZY7 148 aa16.21■□□□□ 0.19
PTN-202ENST00000393083 ECM29Q5VYK3 1845 aa16.21■□□□□ 0.19
PTN-202ENST00000393083 MYH2Q9UKX2 1941 aa16.21■□□□□ 0.19
PTN-202ENST00000393083 LDHCP07864 332 aa16.21■□□□□ 0.18
PTN-202ENST00000393083 NAA16Q6N069 864 aaPredicted RBP16.21■□□□□ 0.18
PTN-202ENST00000393083 ADGRA1Q86SQ6 560 aa16.21■□□□□ 0.18
PTN-202ENST00000393083 SNX21Q969T3 373 aa16.21■□□□□ 0.18
PTN-202ENST00000393083 DEFB129Q9H1M3 183 aa16.21■□□□□ 0.18
PTN-202ENST00000393083 VEZTQ9HBM0 779 aa16.21■□□□□ 0.18
PTN-202ENST00000393083 RBM8AQ9Y5S9 174 aaKnown RBP16.21■□□□□ 0.18
PTN-202ENST00000393083 LAMA4Q16363 1823 aa16.2■□□□□ 0.18
PTN-202ENST00000393083 CACNB3P54284 484 aa16.2■□□□□ 0.18
PTN-202ENST00000393083 MAP3K12Q12852 859 aa16.2■□□□□ 0.18
PTN-202ENST00000393083 FKBP1CQ5VVH2 108 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms