RNA–Protein interactions for RNA: ENST00000392351.7

HOMER3-202, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,557 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-202ENST00000392351 ZC3H15Q8WU90 426 aaKnown RBP30.71■■■□□ 2.51
HOMER3-202ENST00000392351 CLRN2A0PK11 232 aa30.7■■■□□ 2.5
HOMER3-202ENST00000392351 CHGBP05060 677 aa30.7■■■□□ 2.5
HOMER3-202ENST00000392351 ANGEL2Q5VTE6 544 aaKnown RBP30.7■■■□□ 2.5
HOMER3-202ENST00000392351 GPR75-ASB3A0A0A6YYF3 556 aa30.69■■■□□ 2.5
HOMER3-202ENST00000392351 TCRBV5S4A2TA0A5A2 114 aa30.69■■■□□ 2.5
HOMER3-202ENST00000392351 SLFNL1Q499Z3 407 aa30.69■■■□□ 2.5
HOMER3-202ENST00000392351 NOL10Q9BSC4 688 aaKnown RBP30.69■■■□□ 2.5
HOMER3-202ENST00000392351 LRRFIP1Q32MZ4 808 aaKnown RBP30.68■■■□□ 2.5
HOMER3-202ENST00000392351 AATFQ9NY61 560 aaKnown RBP eCLIP30.68■■■□□ 2.5
HOMER3-202ENST00000392351 PGAP2Q9UHJ9 254 aa30.68■■■□□ 2.5
HOMER3-202ENST00000392351 UBE3CQ15386 1083 aa30.67■■■□□ 2.5
HOMER3-202ENST00000392351 SPDYE2Q495Y8 402 aa30.67■■■□□ 2.5
HOMER3-202ENST00000392351 MIGA1Q8NAN2 632 aa30.67■■■□□ 2.5
HOMER3-202ENST00000392351 ZNF70Q9UC06 446 aaPredicted RBP30.67■■■□□ 2.5
HOMER3-202ENST00000392351 RNF113AO15541 343 aaKnown RBP30.66■■■□□ 2.5
HOMER3-202ENST00000392351 ZFYP08048 801 aaPredicted RBP30.66■■■□□ 2.5
HOMER3-202ENST00000392351 CDC42EP5Q6NZY7 148 aa30.66■■■□□ 2.5
HOMER3-202ENST00000392351 DCPSQ96C86 337 aaKnown RBP30.66■■■□□ 2.5
HOMER3-202ENST00000392351 VEZTQ9HBM0 779 aa30.66■■■□□ 2.5
HOMER3-202ENST00000392351 CDK5RAP2Q96SN8 1893 aa30.66■■■□□ 2.5
HOMER3-202ENST00000392351 BAG3O95817 575 aa30.66■■■□□ 2.5
HOMER3-202ENST00000392351 SDSP20132 328 aa30.66■■■□□ 2.5
HOMER3-202ENST00000392351 MAP1SQ66K74 1059 aaPredicted RBP30.66■■■□□ 2.5
HOMER3-202ENST00000392351 USP40Q9NVE5 1235 aa30.66■■■□□ 2.5
HOMER3-202ENST00000392351 TOMM70O94826 608 aa30.65■■■□□ 2.5
HOMER3-202ENST00000392351 CHADLQ6NUI6 762 aa30.65■■■□□ 2.5
HOMER3-202ENST00000392351 TMOD2Q9NZR1 351 aa30.65■■■□□ 2.5
HOMER3-202ENST00000392351 SCAF8Q9UPN6 1271 aaKnown RBP30.65■■■□□ 2.5
HOMER3-202ENST00000392351 PITPNM2Q9BZ72 1349 aa30.64■■■□□ 2.5
HOMER3-202ENST00000392351 CACNB3P54284 484 aa30.64■■■□□ 2.5
HOMER3-202ENST00000392351 RFX7Q2KHR2 1363 aa30.63■■■□□ 2.49
HOMER3-202ENST00000392351 FOCADQ5VW36 1801 aa30.63■■■□□ 2.49
HOMER3-202ENST00000392351 RHBDL3P58872 404 aa30.62■■■□□ 2.49
HOMER3-202ENST00000392351 PPP4CP60510 307 aa30.62■■■□□ 2.49
HOMER3-202ENST00000392351 DYNLL1P63167 89 aaKnown RBP30.62■■■□□ 2.49
HOMER3-202ENST00000392351 APOBEC3FQ8IUX4 373 aaKnown RBP30.62■■■□□ 2.49
HOMER3-202ENST00000392351 APPBP2Q92624 585 aa30.62■■■□□ 2.49
HOMER3-202ENST00000392351 MAGEB6P1A0A0J9YX57 407 aa30.62■■■□□ 2.49
HOMER3-202ENST00000392351 PLCG2P16885 1265 aa30.62■■■□□ 2.49
HOMER3-202ENST00000392351 KRT26Q7Z3Y9 468 aa30.62■■■□□ 2.49
HOMER3-202ENST00000392351 SULF1Q8IWU6 871 aa30.62■■■□□ 2.49
HOMER3-202ENST00000392351 RBM46Q8TBY0 533 aaKnown RBP30.62■■■□□ 2.49
HOMER3-202ENST00000392351 SH3RF3Q8TEJ3 882 aaPredicted RBP30.62■■■□□ 2.49
HOMER3-202ENST00000392351 TCP10L2B9ZVM9 353 aa30.61■■■□□ 2.49
HOMER3-202ENST00000392351 SMC1BQ8NDV3 1235 aa30.61■■■□□ 2.49
HOMER3-202ENST00000392351 RIOK1Q9BRS2 568 aaKnown RBP30.61■■■□□ 2.49
HOMER3-202ENST00000392351 PUS7LQ9H0K6 701 aaKnown RBP30.61■■■□□ 2.49
HOMER3-202ENST00000392351 BMP2KLQ5H9B9 411 aa30.6■■■□□ 2.49
HOMER3-202ENST00000392351 TICAM2Q86XR7 235 aa30.6■■■□□ 2.49
HOMER3-202ENST00000392351 CERS3Q8IU89 383 aa30.6■■■□□ 2.49
HOMER3-202ENST00000392351 TNFAIP1Q13829 316 aa30.59■■■□□ 2.49
HOMER3-202ENST00000392351 CDC37L1Q7L3B6 337 aa30.59■■■□□ 2.49
HOMER3-202ENST00000392351 TEX11Q8IYF3 940 aa30.59■■■□□ 2.49
HOMER3-202ENST00000392351 OSBP2Q969R2 916 aa30.59■■■□□ 2.49
HOMER3-202ENST00000392351 GLIS2Q9BZE0 524 aaPredicted RBP30.59■■■□□ 2.49
HOMER3-202ENST00000392351 ADM5C9JUS6 153 aa30.58■■■□□ 2.49
HOMER3-202ENST00000392351 MBD4O95243 580 aa30.58■■■□□ 2.49
HOMER3-202ENST00000392351 NFIAQ12857 509 aa30.58■■■□□ 2.49
HOMER3-202ENST00000392351 AIDAQ96BJ3 306 aa30.58■■■□□ 2.49
HOMER3-202ENST00000392351 WDHD1O75717 1129 aaPredicted RBP30.58■■■□□ 2.49
HOMER3-202ENST00000392351 ZMYM1Q5SVZ6 1142 aa30.58■■■□□ 2.49
HOMER3-202ENST00000392351 FKBP1CQ5VVH2 108 aa30.58■■■□□ 2.49
HOMER3-202ENST00000392351 USP48Q86UV5 1035 aa30.58■■■□□ 2.49
HOMER3-202ENST00000392351 LCORLQ8N3X6 602 aa30.58■■■□□ 2.49
HOMER3-202ENST00000392351 ARMT1Q9H993 441 aa30.58■■■□□ 2.49
HOMER3-202ENST00000392351 DEFB129Q9H1M3 183 aa30.57■■■□□ 2.48
HOMER3-202ENST00000392351 TNNI2P48788 182 aa30.56■■■□□ 2.48
HOMER3-202ENST00000392351 PICALMQ13492 652 aa30.56■■■□□ 2.48
HOMER3-202ENST00000392351 FAM227BQ96M60 508 aa30.56■■■□□ 2.48
HOMER3-202ENST00000392351 SEC62Q99442 399 aaKnown RBP30.56■■■□□ 2.48
HOMER3-202ENST00000392351 IDI2Q9BXS1 227 aa30.56■■■□□ 2.48
HOMER3-202ENST00000392351 DIAPH3Q9NSV4 1193 aa30.56■■■□□ 2.48
HOMER3-202ENST00000392351 M0R2C6 588 aa30.55■■■□□ 2.48
HOMER3-202ENST00000392351 HIP1O00291 1037 aa30.55■■■□□ 2.48
HOMER3-202ENST00000392351 CNTNAP1P78357 1384 aa30.55■■■□□ 2.48
HOMER3-202ENST00000392351 FAM198AQ9UFP1 575 aa30.55■■■□□ 2.48
HOMER3-202ENST00000392351 A0A0D9SFI3 127 aa30.54■■■□□ 2.48
HOMER3-202ENST00000392351 TCP10Q12799 353 aa30.54■■■□□ 2.48
HOMER3-202ENST00000392351 NMIQ13287 307 aaPredicted RBP30.54■■■□□ 2.48
HOMER3-202ENST00000392351 RASA3Q14644 834 aa30.54■■■□□ 2.48
HOMER3-202ENST00000392351 DLK2Q6UY11 383 aa30.54■■■□□ 2.48
HOMER3-202ENST00000392351 TGFBRAP1Q8WUH2 860 aa30.54■■■□□ 2.48
HOMER3-202ENST00000392351 DDX4Q9NQI0 724 aaKnown RBP30.54■■■□□ 2.48
HOMER3-202ENST00000392351 FAM83AQ86UY5 434 aa30.54■■■□□ 2.48
HOMER3-202ENST00000392351 CRNKL1Q9BZJ0 848 aaKnown RBP30.54■■■□□ 2.48
HOMER3-202ENST00000392351 NAV1Q8NEY1 1877 aa30.53■■■□□ 2.48
HOMER3-202ENST00000392351 TRAF5O00463 557 aa30.53■■■□□ 2.48
HOMER3-202ENST00000392351 ITGBL1O95965 494 aaPredicted RBP30.53■■■□□ 2.48
HOMER3-202ENST00000392351 TMEM39BQ9GZU3 492 aa30.53■■■□□ 2.48
HOMER3-202ENST00000392351 HELLSQ9NRZ9 838 aa30.53■■■□□ 2.48
HOMER3-202ENST00000392351 MYH1P12882 1939 aa30.52■■■□□ 2.48
HOMER3-202ENST00000392351 TRPM7Q96QT4 1865 aa30.52■■■□□ 2.48
HOMER3-202ENST00000392351 GPAA1O43292 621 aa30.52■■■□□ 2.48
HOMER3-202ENST00000392351 FSTL1Q12841 308 aa30.52■■■□□ 2.48
HOMER3-202ENST00000392351 PRAMEF18Q5VWM3 479 aa30.52■■■□□ 2.48
HOMER3-202ENST00000392351 CWC27Q6UX04 472 aaKnown RBP30.52■■■□□ 2.48
HOMER3-202ENST00000392351 PPP2R3BQ9Y5P8 575 aa30.52■■■□□ 2.48
HOMER3-202ENST00000392351 USP5P45974 858 aa30.51■■■□□ 2.47
HOMER3-202ENST00000392351 MAPKAPK5Q8IW41 473 aa30.51■■■□□ 2.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms