RNA–Protein interactions for RNA: ENST00000391303.1

RNU1-56P-201, Transcript of RNA, U1 small nuclear 56, pseudogene, humanhuman

BASIC

Gene RNU1-56P, Length 164 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-56P-201ENST00000391303 IGF2BP3O00425 579 aaKnown RBP eCLIP8.7□□□□□ -1.02
RNU1-56P-201ENST00000391303 GNRH1P01148 92 aa8.7□□□□□ -1.02
RNU1-56P-201ENST00000391303 LDHCP07864 332 aa8.7□□□□□ -1.02
RNU1-56P-201ENST00000391303 UQCRFS1P1P0C7P4 283 aa8.7□□□□□ -1.02
RNU1-56P-201ENST00000391303 PRDX5P30044 214 aa8.7□□□□□ -1.02
RNU1-56P-201ENST00000391303 GJA5P36382 358 aa8.7□□□□□ -1.02
RNU1-56P-201ENST00000391303 GSTO1P78417 241 aa8.7□□□□□ -1.02
RNU1-56P-201ENST00000391303 HNRNPUQ00839 825 aaKnown RBP eCLIP8.7□□□□□ -1.02
RNU1-56P-201ENST00000391303 MAP3K10Q02779 954 aa8.7□□□□□ -1.02
RNU1-56P-201ENST00000391303 MKRN3Q13064 507 aaKnown RBP8.7□□□□□ -1.02
RNU1-56P-201ENST00000391303 G3BP1Q13283 466 aaKnown RBP eCLIP8.7□□□□□ -1.02
RNU1-56P-201ENST00000391303 PPIL2Q13356 520 aa8.7□□□□□ -1.02
RNU1-56P-201ENST00000391303 SNAPC2Q13487 334 aa8.7□□□□□ -1.02
RNU1-56P-201ENST00000391303 RASGRF1Q13972 1273 aa8.7□□□□□ -1.02
RNU1-56P-201ENST00000391303 NOL9Q5SY16 702 aaKnown RBP8.7□□□□□ -1.02
RNU1-56P-201ENST00000391303 CDC42EP5Q6NZY7 148 aa8.7□□□□□ -1.02
RNU1-56P-201ENST00000391303 FRAT1Q92837 279 aaPredicted RBP8.7□□□□□ -1.02
RNU1-56P-201ENST00000391303 XAGE2Q96GT9 111 aa8.7□□□□□ -1.02
RNU1-56P-201ENST00000391303 ZNF512BQ96KM6 892 aaPredicted RBP8.7□□□□□ -1.02
RNU1-56P-201ENST00000391303 WRNIP1Q96S55 665 aa8.7□□□□□ -1.02
RNU1-56P-201ENST00000391303 ELP3Q9H9T3 547 aa8.7□□□□□ -1.02
RNU1-56P-201ENST00000391303 ZFYVE28Q9HCC9 887 aa8.7□□□□□ -1.02
RNU1-56P-201ENST00000391303 HPS5Q9UPZ3 1129 aa8.7□□□□□ -1.02
RNU1-56P-201ENST00000391303 PA2G4Q9UQ80 394 aaKnown RBP8.7□□□□□ -1.02
RNU1-56P-201ENST00000391303 ZBED9Q6R2W3 1325 aa8.7□□□□□ -1.02
RNU1-56P-201ENST00000391303 ZNF646O15015 1829 aaPredicted RBP8.69□□□□□ -1.02
RNU1-56P-201ENST00000391303 CCL15-CCL14A0A0B4J2E2 113 aa8.69□□□□□ -1.02
RNU1-56P-201ENST00000391303 BCAR3O75815 825 aa8.69□□□□□ -1.02
RNU1-56P-201ENST00000391303 ARID4AP29374 1257 aaPredicted RBP8.69□□□□□ -1.02
RNU1-56P-201ENST00000391303 TIMM10P62072 90 aa8.69□□□□□ -1.02
RNU1-56P-201ENST00000391303 SP3Q02447 781 aa8.69□□□□□ -1.02
RNU1-56P-201ENST00000391303 TFCP2Q12800 502 aa8.69□□□□□ -1.02
RNU1-56P-201ENST00000391303 POLA2Q14181 598 aa8.69□□□□□ -1.02
RNU1-56P-201ENST00000391303 CCL15Q16663 113 aa8.69□□□□□ -1.02
RNU1-56P-201ENST00000391303 GORABQ5T7V8 394 aa8.69□□□□□ -1.02
RNU1-56P-201ENST00000391303 DZIP1Q86YF9 867 aaKnown RBP8.69□□□□□ -1.02
RNU1-56P-201ENST00000391303 FTSJ3Q8IY81 847 aaKnown RBP8.69□□□□□ -1.02
RNU1-56P-201ENST00000391303 SSH3Q8TE77 659 aa8.69□□□□□ -1.02
RNU1-56P-201ENST00000391303 BRI3BPQ8WY22 251 aa8.69□□□□□ -1.02
RNU1-56P-201ENST00000391303 USP40Q9NVE5 1235 aa8.69□□□□□ -1.02
RNU1-56P-201ENST00000391303 FZD1Q9UP38 647 aa8.69□□□□□ -1.02
RNU1-56P-201ENST00000391303 NOP58Q9Y2X3 529 aaKnown RBP8.69□□□□□ -1.02
RNU1-56P-201ENST00000391303 SNCAIPQ9Y6H5 919 aa8.69□□□□□ -1.02
RNU1-56P-201ENST00000391303 GPR75-ASB3A0A0A6YYF3 556 aa8.68□□□□□ -1.02
RNU1-56P-201ENST00000391303 CXCL11O14625 94 aa8.68□□□□□ -1.02
RNU1-56P-201ENST00000391303 TBC1D12O60347 775 aa8.68□□□□□ -1.02
RNU1-56P-201ENST00000391303 CACNB3P54284 484 aa8.68□□□□□ -1.02
RNU1-56P-201ENST00000391303 PRMT2P55345 433 aa8.68□□□□□ -1.02
RNU1-56P-201ENST00000391303 ATP8B2P98198 1209 aa8.68□□□□□ -1.02
RNU1-56P-201ENST00000391303 CRHR2Q13324 411 aa8.68□□□□□ -1.02
RNU1-56P-201ENST00000391303 DIXDC1Q155Q3 683 aa8.68□□□□□ -1.02
RNU1-56P-201ENST00000391303 ERICH6Q7L0X2 663 aa8.68□□□□□ -1.02
RNU1-56P-201ENST00000391303 CERS3Q8IU89 383 aa8.68□□□□□ -1.02
RNU1-56P-201ENST00000391303 CDAN1Q8IWY9 1227 aa8.68□□□□□ -1.02
RNU1-56P-201ENST00000391303 MIER1Q8N108 512 aa8.68□□□□□ -1.02
RNU1-56P-201ENST00000391303 TMEM57Q8N5G2 664 aa8.68□□□□□ -1.02
RNU1-56P-201ENST00000391303 SPATA5Q8NB90 893 aa8.68□□□□□ -1.02
RNU1-56P-201ENST00000391303 OTUD5Q96G74 571 aa8.68□□□□□ -1.02
RNU1-56P-201ENST00000391303 PTPN18Q99952 460 aa8.68□□□□□ -1.02
RNU1-56P-201ENST00000391303 CHMP4BQ9H444 224 aaKnown RBP8.68□□□□□ -1.02
RNU1-56P-201ENST00000391303 FAM198AQ9UFP1 575 aa8.68□□□□□ -1.02
RNU1-56P-201ENST00000391303 KCNH4Q9UQ05 1017 aa8.68□□□□□ -1.02
RNU1-56P-201ENST00000391303 MROH7-TTC4A0A0A0MT08 1334 aa8.67□□□□□ -1.02
RNU1-56P-201ENST00000391303 PNMA6EA0A0J9YXQ4 647 aa8.67□□□□□ -1.02
RNU1-56P-201ENST00000391303 IRF6O14896 467 aa8.67□□□□□ -1.02
RNU1-56P-201ENST00000391303 ZBTB7BO15156 539 aaPredicted RBP8.67□□□□□ -1.02
RNU1-56P-201ENST00000391303 TLR2O60603 784 aa8.67□□□□□ -1.02
RNU1-56P-201ENST00000391303 PLCG2P16885 1265 aa8.67□□□□□ -1.02
RNU1-56P-201ENST00000391303 ADORA1P30542 326 aa8.67□□□□□ -1.02
RNU1-56P-201ENST00000391303 TAF1CQ15572 869 aaPredicted RBP8.67□□□□□ -1.02
RNU1-56P-201ENST00000391303 RFX7Q2KHR2 1363 aa8.67□□□□□ -1.02
RNU1-56P-201ENST00000391303 HSP90AB4PQ58FF6 505 aa8.67□□□□□ -1.02
RNU1-56P-201ENST00000391303 CCDC158Q5M9N0 1113 aa8.67□□□□□ -1.02
RNU1-56P-201ENST00000391303 ATRNL1Q5VV63 1379 aa8.67□□□□□ -1.02
RNU1-56P-201ENST00000391303 OTOP1Q7RTM1 612 aa8.67□□□□□ -1.02
RNU1-56P-201ENST00000391303 ANKRD23Q86SG2 305 aa8.67□□□□□ -1.02
RNU1-56P-201ENST00000391303 CLUAP1Q96AJ1 413 aa8.67□□□□□ -1.02
RNU1-56P-201ENST00000391303 NEUROD6Q96NK8 337 aa8.67□□□□□ -1.02
RNU1-56P-201ENST00000391303 TBC1D2Q9BYX2 928 aa8.67□□□□□ -1.02
RNU1-56P-201ENST00000391303 R3HDMLQ9H3Y0 253 aa8.67□□□□□ -1.02
RNU1-56P-201ENST00000391303 EFCC1Q9HA90 598 aa8.67□□□□□ -1.02
RNU1-56P-201ENST00000391303 HMG20BQ9P0W2 317 aa8.67□□□□□ -1.02
RNU1-56P-201ENST00000391303 ABCF2Q9UG63 623 aa8.67□□□□□ -1.02
RNU1-56P-201ENST00000391303 TRIM17Q9Y577 477 aa8.67□□□□□ -1.02
RNU1-56P-201ENST00000391303 COL2A1P02458 1487 aaPredicted RBP8.66□□□□□ -1.02
RNU1-56P-201ENST00000391303 CTNND1O60716 968 aaKnown RBP8.66□□□□□ -1.02
RNU1-56P-201ENST00000391303 BAG3O95817 575 aa8.66□□□□□ -1.02
RNU1-56P-201ENST00000391303 RGS3P49796 1198 aa8.66□□□□□ -1.02
RNU1-56P-201ENST00000391303 MECOMQ03112 1051 aa8.66□□□□□ -1.02
RNU1-56P-201ENST00000391303 TCP10Q12799 353 aa8.66□□□□□ -1.02
RNU1-56P-201ENST00000391303 NFIAQ12857 509 aa8.66□□□□□ -1.02
RNU1-56P-201ENST00000391303 KIF22Q14807 665 aa8.66□□□□□ -1.02
RNU1-56P-201ENST00000391303 FASTKD5Q7L8L6 764 aaKnown RBP8.66□□□□□ -1.02
RNU1-56P-201ENST00000391303 ERC1Q8IUD2 1116 aa8.66□□□□□ -1.02
RNU1-56P-201ENST00000391303 SCYL3Q8IZE3 742 aa8.66□□□□□ -1.02
RNU1-56P-201ENST00000391303 ZKSCAN4Q969J2 545 aaPredicted RBP8.66□□□□□ -1.02
RNU1-56P-201ENST00000391303 ARMC5Q96C12 935 aa8.66□□□□□ -1.02
RNU1-56P-201ENST00000391303 DHX36Q9H2U1 1008 aaKnown RBP8.66□□□□□ -1.02
RNU1-56P-201ENST00000391303 PTPN22Q9Y2R2 807 aa8.66□□□□□ -1.02
RNU1-56P-201ENST00000391303 SLC45A1Q9Y2W3 748 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms