RNA–Protein interactions for RNA: ENST00000384566.1

RNU6-140P-201, Transcript of RNA, U6 small nuclear 140, pseudogene, humanhuman

BASIC

Gene RNU6-140P, Length 108 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-140P-201ENST00000384566 ESRRAP11474 423 aaPredicted RBP4.32□□□□□ -1.72
RNU6-140P-201ENST00000384566 CTBSQ01459 385 aa4.32□□□□□ -1.72
RNU6-140P-201ENST00000384566 PPP2R5EQ16537 467 aa4.32□□□□□ -1.72
RNU6-140P-201ENST00000384566 LRRFIP1Q32MZ4 808 aaKnown RBP4.32□□□□□ -1.72
RNU6-140P-201ENST00000384566 ZNF468Q5VIY5 522 aaPredicted RBP4.32□□□□□ -1.72
RNU6-140P-201ENST00000384566 LARP1BQ659C4 914 aaKnown RBP4.32□□□□□ -1.72
RNU6-140P-201ENST00000384566 KANK3Q6NY19 840 aa4.32□□□□□ -1.72
RNU6-140P-201ENST00000384566 FOXR1Q6PIV2 292 aa4.32□□□□□ -1.72
RNU6-140P-201ENST00000384566 C16orf86Q6ZW13 317 aa4.32□□□□□ -1.72
RNU6-140P-201ENST00000384566 KIAA0907Q7Z7F0 614 aaPredicted RBP4.32□□□□□ -1.72
RNU6-140P-201ENST00000384566 FAM35AQ86V20 835 aa4.32□□□□□ -1.72
RNU6-140P-201ENST00000384566 CACTIN-AS1Q8N1I8 211 aa4.32□□□□□ -1.72
RNU6-140P-201ENST00000384566 C19orf47Q8N9M1 422 aaKnown RBP4.32□□□□□ -1.72
RNU6-140P-201ENST00000384566 STK35Q8TDR2 534 aa4.32□□□□□ -1.72
RNU6-140P-201ENST00000384566 MICAL1Q8TDZ2 1067 aa4.32□□□□□ -1.72
RNU6-140P-201ENST00000384566 TRERF1Q96PN7 1200 aa4.32□□□□□ -1.72
RNU6-140P-201ENST00000384566 TNKS2Q9H2K2 1166 aa4.32□□□□□ -1.72
RNU6-140P-201ENST00000384566 KANSL2Q9H9L4 492 aa4.32□□□□□ -1.72
RNU6-140P-201ENST00000384566 PCDH12Q9NPG4 1184 aa4.32□□□□□ -1.72
RNU6-140P-201ENST00000384566 DDAH1O94760 285 aa4.31□□□□□ -1.72
RNU6-140P-201ENST00000384566 GJB6O95452 261 aa4.31□□□□□ -1.72
RNU6-140P-201ENST00000384566 CPB1P15086 417 aa4.31□□□□□ -1.72
RNU6-140P-201ENST00000384566 ITGA6P23229 1130 aa4.31□□□□□ -1.72
RNU6-140P-201ENST00000384566 GYS2P54840 703 aa4.31□□□□□ -1.72
RNU6-140P-201ENST00000384566 CABP4P57796 275 aa4.31□□□□□ -1.72
RNU6-140P-201ENST00000384566 TBC1D8BQ0IIM8 1120 aa4.31□□□□□ -1.72
RNU6-140P-201ENST00000384566 AP3B2Q13367 1082 aa4.31□□□□□ -1.72
RNU6-140P-201ENST00000384566 IKBKEQ14164 716 aa4.31□□□□□ -1.72
RNU6-140P-201ENST00000384566 MTERF2Q49AM1 385 aa4.31□□□□□ -1.72
RNU6-140P-201ENST00000384566 C2orf27AQ580R0 203 aa4.31□□□□□ -1.72
RNU6-140P-201ENST00000384566 ELMSAN1Q6PJG2 1045 aa4.31□□□□□ -1.72
RNU6-140P-201ENST00000384566 PDZD3Q86UT5 571 aa4.31□□□□□ -1.72
RNU6-140P-201ENST00000384566 JMYQ8N9B5 988 aa4.31□□□□□ -1.72
RNU6-140P-201ENST00000384566 ST13P5Q8NFI4 369 aaPredicted RBP4.31□□□□□ -1.72
RNU6-140P-201ENST00000384566 THAP3Q8WTV1 239 aaPredicted RBP4.31□□□□□ -1.72
RNU6-140P-201ENST00000384566 TNFRSF25Q93038 417 aa4.31□□□□□ -1.72
RNU6-140P-201ENST00000384566 ZNF669Q96BR6 464 aaPredicted RBP4.31□□□□□ -1.72
RNU6-140P-201ENST00000384566 TM9SF2Q99805 663 aa4.31□□□□□ -1.72
RNU6-140P-201ENST00000384566 CWC22Q9HCG8 908 aaKnown RBP4.31□□□□□ -1.72
RNU6-140P-201ENST00000384566 AVENQ9NQS1 362 aaPredicted RBP4.31□□□□□ -1.72
RNU6-140P-201ENST00000384566 FRRS1LQ9P0K9 344 aa4.31□□□□□ -1.72
RNU6-140P-201ENST00000384566 POLR3KQ9Y2Y1 108 aaPredicted RBP4.31□□□□□ -1.72
RNU6-140P-201ENST00000384566 KDM2BQ8NHM5 1336 aa4.3□□□□□ -1.72
RNU6-140P-201ENST00000384566 PRR36Q9H6K5 1346 aa4.3□□□□□ -1.72
RNU6-140P-201ENST00000384566 A0A1W2PQH9 124 aa4.3□□□□□ -1.72
RNU6-140P-201ENST00000384566 MEIS3P2A8K0S8 358 aa4.3□□□□□ -1.72
RNU6-140P-201ENST00000384566 GRIN3BO60391 1043 aa4.3□□□□□ -1.72
RNU6-140P-201ENST00000384566 GSTP1P09211 210 aaKnown RBP4.3□□□□□ -1.72
RNU6-140P-201ENST00000384566 GUCY2CP25092 1073 aa4.3□□□□□ -1.72
RNU6-140P-201ENST00000384566 CDC27P30260 824 aa4.3□□□□□ -1.72
RNU6-140P-201ENST00000384566 PTPN11Q06124 597 aaPredicted RBP4.3□□□□□ -1.72
RNU6-140P-201ENST00000384566 SQSTM1Q13501 440 aa4.3□□□□□ -1.72
RNU6-140P-201ENST00000384566 TCEA2Q15560 299 aa4.3□□□□□ -1.72
RNU6-140P-201ENST00000384566 PERM1Q5SV97 790 aa4.3□□□□□ -1.72
RNU6-140P-201ENST00000384566 MAP1SQ66K74 1059 aaPredicted RBP4.3□□□□□ -1.72
RNU6-140P-201ENST00000384566 ADAMTSL4Q6UY14 1074 aa4.3□□□□□ -1.72
RNU6-140P-201ENST00000384566 SYNPOQ8N3V7 929 aa4.3□□□□□ -1.72
RNU6-140P-201ENST00000384566 ZSCAN1Q8NBB4 408 aa4.3□□□□□ -1.72
RNU6-140P-201ENST00000384566 TTC9Q92623 222 aa4.3□□□□□ -1.72
RNU6-140P-201ENST00000384566 KIFC2Q96AC6 838 aa4.3□□□□□ -1.72
RNU6-140P-201ENST00000384566 FEZ1Q99689 392 aa4.3□□□□□ -1.72
RNU6-140P-201ENST00000384566 LPIN3Q9BQK8 851 aa4.3□□□□□ -1.72
RNU6-140P-201ENST00000384566 LACRTQ9GZZ8 138 aa4.3□□□□□ -1.72
RNU6-140P-201ENST00000384566 SMG9Q9H0W8 520 aaKnown RBP4.3□□□□□ -1.72
RNU6-140P-201ENST00000384566 SOX17Q9H6I2 414 aaPredicted RBP4.3□□□□□ -1.72
RNU6-140P-201ENST00000384566 CACNA2D2Q9NY47 1150 aa4.3□□□□□ -1.72
RNU6-140P-201ENST00000384566 SLC6A14Q9UN76 642 aa4.3□□□□□ -1.72
RNU6-140P-201ENST00000384566 LEMD3Q9Y2U8 911 aa4.3□□□□□ -1.72
RNU6-140P-201ENST00000384566 SLC12A7Q9Y666 1083 aa4.3□□□□□ -1.72
RNU6-140P-201ENST00000384566 SNCAIPQ9Y6H5 919 aa4.3□□□□□ -1.72
RNU6-140P-201ENST00000384566 ADARB2-AS1A8MUL3 147 aa4.29□□□□□ -1.72
RNU6-140P-201ENST00000384566 SOX1O00570 391 aaPredicted RBP4.29□□□□□ -1.72
RNU6-140P-201ENST00000384566 BMP4P12644 408 aa4.29□□□□□ -1.72
RNU6-140P-201ENST00000384566 PCBP4P57723 403 aaKnown RBP4.29□□□□□ -1.72
RNU6-140P-201ENST00000384566 MLECQ14165 292 aa4.29□□□□□ -1.72
RNU6-140P-201ENST00000384566 C6orf15Q6UXA7 325 aaPredicted RBP4.29□□□□□ -1.72
RNU6-140P-201ENST00000384566 RUFY4Q6ZNE9 571 aa4.29□□□□□ -1.72
RNU6-140P-201ENST00000384566 NOL8Q76FK4 1167 aaKnown RBP4.29□□□□□ -1.72
RNU6-140P-201ENST00000384566 TTC6Q86TZ1 520 aa4.29□□□□□ -1.72
RNU6-140P-201ENST00000384566 FAM178BQ8IXR5 827 aa4.29□□□□□ -1.72
RNU6-140P-201ENST00000384566 TAB3Q8N5C8 712 aaPredicted RBP4.29□□□□□ -1.72
RNU6-140P-201ENST00000384566 TMEM40Q8WWA1 233 aa4.29□□□□□ -1.72
RNU6-140P-201ENST00000384566 SENP2Q9HC62 589 aa4.29□□□□□ -1.72
RNU6-140P-201ENST00000384566 SH2B1Q9NRF2 756 aaPredicted RBP4.29□□□□□ -1.72
RNU6-140P-201ENST00000384566 AAASQ9NRG9 546 aa4.29□□□□□ -1.72
RNU6-140P-201ENST00000384566 PFDN2Q9UHV9 154 aa4.29□□□□□ -1.72
RNU6-140P-201ENST00000384566 PCDHA4Q9UN74 947 aa4.29□□□□□ -1.72
RNU6-140P-201ENST00000384566 TRIM33Q9UPN9 1127 aa4.29□□□□□ -1.72
RNU6-140P-201ENST00000384566 H3BRJ5 948 aa4.28□□□□□ -1.72
RNU6-140P-201ENST00000384566 GFRA2O00451 464 aa4.28□□□□□ -1.72
RNU6-140P-201ENST00000384566 NRG2O14511 850 aaPredicted RBP4.28□□□□□ -1.72
RNU6-140P-201ENST00000384566 C2CD2LO14523 706 aa4.28□□□□□ -1.72
RNU6-140P-201ENST00000384566 HTR3BO95264 441 aa4.28□□□□□ -1.72
RNU6-140P-201ENST00000384566 CYP11A1P05108 521 aa4.28□□□□□ -1.72
RNU6-140P-201ENST00000384566 ADH7P40394 386 aa4.28□□□□□ -1.72
RNU6-140P-201ENST00000384566 MASP1P48740 699 aa4.28□□□□□ -1.72
RNU6-140P-201ENST00000384566 ARL4DP49703 201 aa4.28□□□□□ -1.72
RNU6-140P-201ENST00000384566 HNRNPUQ00839 825 aaKnown RBP eCLIP4.28□□□□□ -1.72
RNU6-140P-201ENST00000384566 AMPD3Q01432 767 aa4.28□□□□□ -1.72
RNU6-140P-201ENST00000384566 GSTM4Q03013 218 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms