RNA–Protein interactions for RNA: ENST00000383888.1

RNU6-338P-201, Transcript of RNA, U6 small nuclear 338, pseudogene, humanhuman

BASIC

Gene RNU6-338P, Length 105 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-338P-201ENST00000383888 PDGFAP04085 211 aa4.65□□□□□ -1.67
RNU6-338P-201ENST00000383888 MZF1P28698 734 aaPredicted RBP4.65□□□□□ -1.67
RNU6-338P-201ENST00000383888 PCDH1Q08174 1060 aa4.65□□□□□ -1.67
RNU6-338P-201ENST00000383888 TTLL10Q6ZVT0 673 aa4.65□□□□□ -1.67
RNU6-338P-201ENST00000383888 FAM181AQ8N9Y4 354 aa4.65□□□□□ -1.67
RNU6-338P-201ENST00000383888 HRASLS5Q96KN8 279 aa4.65□□□□□ -1.67
RNU6-338P-201ENST00000383888 CORO1BQ9BR76 489 aa4.65□□□□□ -1.67
RNU6-338P-201ENST00000383888 CLEC4MQ9H2X3 399 aaPredicted RBP4.65□□□□□ -1.67
RNU6-338P-201ENST00000383888 ZMIZ1Q9ULJ6 1067 aa4.65□□□□□ -1.67
RNU6-338P-201ENST00000383888 SYNGAP1Q96PV0 1343 aa4.65□□□□□ -1.67
RNU6-338P-201ENST00000383888 A6NHS1 94 aa4.64□□□□□ -1.67
RNU6-338P-201ENST00000383888 CTSBP07858 339 aa4.64□□□□□ -1.67
RNU6-338P-201ENST00000383888 FAM87AP0C7U9 286 aa4.64□□□□□ -1.67
RNU6-338P-201ENST00000383888 CD96P40200 585 aa4.64□□□□□ -1.67
RNU6-338P-201ENST00000383888 BUD31P41223 144 aaPredicted RBP4.64□□□□□ -1.67
RNU6-338P-201ENST00000383888 ZNF423Q2M1K9 1284 aa4.64□□□□□ -1.67
RNU6-338P-201ENST00000383888 NOM1Q5C9Z4 860 aaKnown RBP4.64□□□□□ -1.67
RNU6-338P-201ENST00000383888 ARHGAP27Q6ZUM4 889 aa4.64□□□□□ -1.67
RNU6-338P-201ENST00000383888 KRTAP9-3Q9BYQ3 159 aa4.64□□□□□ -1.67
RNU6-338P-201ENST00000383888 A0A096LPE4 126 aa4.63□□□□□ -1.67
RNU6-338P-201ENST00000383888 A0A1W2PPZ6 126 aa4.63□□□□□ -1.67
RNU6-338P-201ENST00000383888 AOC2O75106 756 aa4.63□□□□□ -1.67
RNU6-338P-201ENST00000383888 TNFRSF21O75509 655 aa4.63□□□□□ -1.67
RNU6-338P-201ENST00000383888 ECM1Q16610 540 aa4.63□□□□□ -1.67
RNU6-338P-201ENST00000383888 PEAR1Q5VY43 1037 aaPredicted RBP4.63□□□□□ -1.67
RNU6-338P-201ENST00000383888 SYDE1Q6ZW31 735 aaPredicted RBP4.63□□□□□ -1.67
RNU6-338P-201ENST00000383888 SNX29Q8TEQ0 813 aa4.63□□□□□ -1.67
RNU6-338P-201ENST00000383888 STK32AQ8WU08 396 aa4.63□□□□□ -1.67
RNU6-338P-201ENST00000383888 LMCD1Q9NZU5 365 aa4.63□□□□□ -1.67
RNU6-338P-201ENST00000383888 CRIM1Q9NZV1 1036 aa4.63□□□□□ -1.67
RNU6-338P-201ENST00000383888 METTL12A8MUP2 240 aa4.62□□□□□ -1.67
RNU6-338P-201ENST00000383888 EHHADHQ08426 723 aa4.62□□□□□ -1.67
RNU6-338P-201ENST00000383888 CDK5R2Q13319 367 aa4.62□□□□□ -1.67
RNU6-338P-201ENST00000383888 AMIGO3Q86WK7 504 aa4.62□□□□□ -1.67
RNU6-338P-201ENST00000383888 CLP1Q92989 425 aaKnown RBP4.62□□□□□ -1.67
RNU6-338P-201ENST00000383888 LIN37Q96GY3 246 aaPredicted RBP4.62□□□□□ -1.67
RNU6-338P-201ENST00000383888 AMOTL2Q9Y2J4 779 aa4.62□□□□□ -1.67
RNU6-338P-201ENST00000383888 SNX11Q9Y5W9 270 aa4.62□□□□□ -1.67
RNU6-338P-201ENST00000383888 NFIBO00712 420 aa4.61□□□□□ -1.67
RNU6-338P-201ENST00000383888 CEACAM5P06731 702 aa4.61□□□□□ -1.67
RNU6-338P-201ENST00000383888 AFMP43652 599 aa4.61□□□□□ -1.67
RNU6-338P-201ENST00000383888 OXCT1P55809 520 aa4.61□□□□□ -1.67
RNU6-338P-201ENST00000383888 PDE3AQ14432 1141 aa4.61□□□□□ -1.67
RNU6-338P-201ENST00000383888 ALKBH2Q6NS38 261 aa4.61□□□□□ -1.67
RNU6-338P-201ENST00000383888 PIDD1Q9HB75 910 aa4.61□□□□□ -1.67
RNU6-338P-201ENST00000383888 LATS2Q9NRM7 1088 aa4.61□□□□□ -1.67
RNU6-338P-201ENST00000383888 SEPT3Q9UH03 358 aa4.61□□□□□ -1.67
RNU6-338P-201ENST00000383888 PPP1R9AQ9ULJ8 1098 aa4.61□□□□□ -1.67
RNU6-338P-201ENST00000383888 ECEL1O95672 775 aa4.6□□□□□ -1.67
RNU6-338P-201ENST00000383888 SLFN14P0C7P3 912 aa4.6□□□□□ -1.67
RNU6-338P-201ENST00000383888 USP5P45974 858 aa4.6□□□□□ -1.67
RNU6-338P-201ENST00000383888 EIF1AXP47813 144 aaKnown RBP4.6□□□□□ -1.67
RNU6-338P-201ENST00000383888 MPZL3Q6UWV2 235 aa4.6□□□□□ -1.67
RNU6-338P-201ENST00000383888 CCNJLQ8IV13 435 aa4.6□□□□□ -1.67
RNU6-338P-201ENST00000383888 HELQQ8TDG4 1101 aa4.6□□□□□ -1.67
RNU6-338P-201ENST00000383888 ASB11Q8WXH4 323 aa4.6□□□□□ -1.67
RNU6-338P-201ENST00000383888 TRIM56Q9BRZ2 755 aaKnown RBP4.6□□□□□ -1.67
RNU6-338P-201ENST00000383888 WDR18Q9BV38 432 aa4.6□□□□□ -1.67
RNU6-338P-201ENST00000383888 ATXN3LQ9H3M9 355 aa4.6□□□□□ -1.67
RNU6-338P-201ENST00000383888 PLAGL2Q9UPG8 496 aa4.6□□□□□ -1.67
RNU6-338P-201ENST00000383888 B3GALT4O96024 378 aa4.59□□□□□ -1.67
RNU6-338P-201ENST00000383888 GLI1P08151 1106 aa4.59□□□□□ -1.67
RNU6-338P-201ENST00000383888 C1QTNF9P0C862 333 aa4.59□□□□□ -1.67
RNU6-338P-201ENST00000383888 CTSWP56202 376 aa4.59□□□□□ -1.67
RNU6-338P-201ENST00000383888 ZP2Q05996 745 aa4.59□□□□□ -1.67
RNU6-338P-201ENST00000383888 SPRED3Q2MJR0 410 aa4.59□□□□□ -1.67
RNU6-338P-201ENST00000383888 PRR23BQ6ZRT6 265 aa4.59□□□□□ -1.67
RNU6-338P-201ENST00000383888 SMYD4Q8IYR2 804 aaPredicted RBP4.59□□□□□ -1.67
RNU6-338P-201ENST00000383888 TNKS2Q9H2K2 1166 aa4.59□□□□□ -1.67
RNU6-338P-201ENST00000383888 ZFYVE28Q9HCC9 887 aa4.59□□□□□ -1.67
RNU6-338P-201ENST00000383888 PRDM7Q9NQW5 492 aa4.59□□□□□ -1.67
RNU6-338P-201ENST00000383888 FOXD3Q9UJU5 478 aaPredicted RBP4.59□□□□□ -1.67
RNU6-338P-201ENST00000383888 POLIQ9UNA4 740 aa4.59□□□□□ -1.67
RNU6-338P-201ENST00000383888 CTNND2Q9UQB3 1225 aa4.59□□□□□ -1.67
RNU6-338P-201ENST00000383888 U3KQE9 123 aa4.59□□□□□ -1.67
RNU6-338P-201ENST00000383888 IQCJ-SCHIP1C9J366 451 aaPredicted RBP4.58□□□□□ -1.68
RNU6-338P-201ENST00000383888 TMPRSS2O15393 492 aa4.58□□□□□ -1.68
RNU6-338P-201ENST00000383888 GRIA4P48058 902 aa4.58□□□□□ -1.68
RNU6-338P-201ENST00000383888 AP3B2Q13367 1082 aa4.58□□□□□ -1.68
RNU6-338P-201ENST00000383888 IKZF1Q13422 519 aa4.58□□□□□ -1.68
RNU6-338P-201ENST00000383888 TMEM164Q5U3C3 297 aa4.58□□□□□ -1.68
RNU6-338P-201ENST00000383888 FBXO15Q8NCQ5 510 aaPredicted RBP4.58□□□□□ -1.68
RNU6-338P-201ENST00000383888 FANCD2OSQ96PS1 177 aa4.58□□□□□ -1.68
RNU6-338P-201ENST00000383888 DUSP23Q9BVJ7 150 aa4.58□□□□□ -1.68
RNU6-338P-201ENST00000383888 LIN7BQ9HAP6 207 aa4.58□□□□□ -1.68
RNU6-338P-201ENST00000383888 PCOLCE2Q9UKZ9 415 aa4.58□□□□□ -1.68
RNU6-338P-201ENST00000383888 LEFTY1O75610 366 aa4.57□□□□□ -1.68
RNU6-338P-201ENST00000383888 ATG7O95352 703 aa4.57□□□□□ -1.68
RNU6-338P-201ENST00000383888 KRT1P04264 644 aa4.57□□□□□ -1.68
RNU6-338P-201ENST00000383888 INHBBP09529 407 aa4.57□□□□□ -1.68
RNU6-338P-201ENST00000383888 TMEM253P0C7T8 217 aa4.57□□□□□ -1.68
RNU6-338P-201ENST00000383888 ATP2B4P23634 1241 aa4.57□□□□□ -1.68
RNU6-338P-201ENST00000383888 HNRNPUQ00839 825 aaKnown RBP eCLIP4.57□□□□□ -1.68
RNU6-338P-201ENST00000383888 AAMPQ13685 434 aa4.57□□□□□ -1.68
RNU6-338P-201ENST00000383888 TMEM67Q5HYA8 995 aa4.57□□□□□ -1.68
RNU6-338P-201ENST00000383888 FYB2Q5VWT5 728 aa4.57□□□□□ -1.68
RNU6-338P-201ENST00000383888 KIRREL1Q96J84 757 aa4.57□□□□□ -1.68
RNU6-338P-201ENST00000383888 TCF12Q99081 682 aa4.57□□□□□ -1.68
RNU6-338P-201ENST00000383888 A0A1W2PP55 124 aa4.56□□□□□ -1.68
RNU6-338P-201ENST00000383888 NPIPB6E9PJ23 425 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 106.5 ms