RNA–Protein interactions for RNA: ENST00000383721.8

NEK4-202, Transcript of NIMA related kinase 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEK4, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-202ENST00000383721 ERCC4Q92889 916 aaPredicted RBP16.15■□□□□ 0.18
NEK4-202ENST00000383721 MRFAP1L1Q96HT8 127 aa16.15■□□□□ 0.18
NEK4-202ENST00000383721 PLA2G12BQ9BX93 195 aa16.15■□□□□ 0.18
NEK4-202ENST00000383721 PSDA5PKW4 1024 aaPredicted RBP16.14■□□□□ 0.17
NEK4-202ENST00000383721 TAF7LQ5H9L4 462 aa16.14■□□□□ 0.17
NEK4-202ENST00000383721 GIGYF2Q6Y7W6 1299 aaKnown RBP16.14■□□□□ 0.17
NEK4-202ENST00000383721 LINC00301Q8NCQ3 95 aa16.14■□□□□ 0.17
NEK4-202ENST00000383721 MRPS27Q92552 414 aaKnown RBP16.14■□□□□ 0.17
NEK4-202ENST00000383721 ANO10Q9NW15 660 aa16.14■□□□□ 0.17
NEK4-202ENST00000383721 GOLGA8BA8MQT2 603 aa16.14■□□□□ 0.17
NEK4-202ENST00000383721 ERVV-1B6SEH8 477 aa16.14■□□□□ 0.17
NEK4-202ENST00000383721 GYS1P13807 737 aa16.14■□□□□ 0.17
NEK4-202ENST00000383721 IFIT5Q13325 482 aaKnown RBP16.14■□□□□ 0.17
NEK4-202ENST00000383721 ADALQ6DHV7 355 aa16.14■□□□□ 0.17
NEK4-202ENST00000383721 BICDL1Q6ZP65 573 aa16.14■□□□□ 0.17
NEK4-202ENST00000383721 RAB11FIP4Q86YS3 637 aa16.14■□□□□ 0.17
NEK4-202ENST00000383721 SYNE4Q8N205 404 aa16.14■□□□□ 0.17
NEK4-202ENST00000383721 ZBTB38Q8NAP3 1195 aaPredicted RBP16.14■□□□□ 0.17
NEK4-202ENST00000383721 FBXO18Q8NFZ0 1043 aa16.14■□□□□ 0.17
NEK4-202ENST00000383721 C8orf76Q96K31 380 aa16.14■□□□□ 0.17
NEK4-202ENST00000383721 CLIC4Q9Y696 253 aa16.14■□□□□ 0.17
NEK4-202ENST00000383721 GPAA1O43292 621 aa16.13■□□□□ 0.17
NEK4-202ENST00000383721 HMGB2P26583 209 aaKnown RBP16.13■□□□□ 0.17
NEK4-202ENST00000383721 MSL1Q68DK7 614 aa16.13■□□□□ 0.17
NEK4-202ENST00000383721 GJB4Q9NTQ9 266 aa16.13■□□□□ 0.17
NEK4-202ENST00000383721 ORC3Q9UBD5 711 aaPredicted RBP16.13■□□□□ 0.17
NEK4-202ENST00000383721 RIC1Q4ADV7 1423 aa16.13■□□□□ 0.17
NEK4-202ENST00000383721 BCORQ6W2J9 1755 aa16.13■□□□□ 0.17
NEK4-202ENST00000383721 SCN7AQ01118 1682 aa16.13■□□□□ 0.17
NEK4-202ENST00000383721 A0A1B0GVL5 298 aa16.13■□□□□ 0.17
NEK4-202ENST00000383721 A0A1W2PQ27 194 aa16.13■□□□□ 0.17
NEK4-202ENST00000383721 A0A1W2PQ64 194 aa16.13■□□□□ 0.17
NEK4-202ENST00000383721 A0A1W2PQD8 194 aa16.13■□□□□ 0.17
NEK4-202ENST00000383721 BECN2A8MW95 431 aa16.13■□□□□ 0.17
NEK4-202ENST00000383721 POLR3DP05423 398 aaPredicted RBP16.13■□□□□ 0.17
NEK4-202ENST00000383721 TBC1D9BQ66K14 1250 aa16.13■□□□□ 0.17
NEK4-202ENST00000383721 NCOA7Q8NI08 942 aa16.13■□□□□ 0.17
NEK4-202ENST00000383721 C16orf45Q96MC5 204 aaPredicted RBP16.13■□□□□ 0.17
NEK4-202ENST00000383721 ZMYND15Q9H091 742 aa16.13■□□□□ 0.17
NEK4-202ENST00000383721 ABCC12Q96J65 1359 aa16.12■□□□□ 0.17
NEK4-202ENST00000383721 DHX16O60231 1041 aaKnown RBP16.12■□□□□ 0.17
NEK4-202ENST00000383721 NDUFA8P51970 172 aa16.12■□□□□ 0.17
NEK4-202ENST00000383721 ARID5BQ14865 1188 aa16.12■□□□□ 0.17
NEK4-202ENST00000383721 RIPOR2Q9Y4F9 1068 aa16.12■□□□□ 0.17
NEK4-202ENST00000383721 NUP98P52948 1817 aa16.12■□□□□ 0.17
NEK4-202ENST00000383721 UBN2Q6ZU65 1347 aa16.12■□□□□ 0.17
NEK4-202ENST00000383721 ZNF213O14771 459 aa16.12■□□□□ 0.17
NEK4-202ENST00000383721 MCAMP43121 646 aa16.12■□□□□ 0.17
NEK4-202ENST00000383721 ATP2B3Q16720 1220 aa16.12■□□□□ 0.17
NEK4-202ENST00000383721 LRRC8AQ8IWT6 810 aa16.12■□□□□ 0.17
NEK4-202ENST00000383721 CTIFO43310 598 aaKnown RBP16.11■□□□□ 0.17
NEK4-202ENST00000383721 STK38Q15208 465 aa16.11■□□□□ 0.17
NEK4-202ENST00000383721 RALYLQ86SE5 291 aaKnown RBP16.11■□□□□ 0.17
NEK4-202ENST00000383721 CEP57L1Q8IYX8 460 aa16.11■□□□□ 0.17
NEK4-202ENST00000383721 CCDC94Q9BW85 323 aaPredicted RBP16.11■□□□□ 0.17
NEK4-202ENST00000383721 NBPF3Q9H094 633 aa16.11■□□□□ 0.17
NEK4-202ENST00000383721 POLR3EQ9NVU0 708 aa16.11■□□□□ 0.17
NEK4-202ENST00000383721 YEATS4O95619 227 aa16.11■□□□□ 0.17
NEK4-202ENST00000383721 METTL24Q5JXM2 366 aa16.11■□□□□ 0.17
NEK4-202ENST00000383721 MYSM1Q5VVJ2 828 aa16.11■□□□□ 0.17
NEK4-202ENST00000383721 AOPEPQ8N6M6 819 aa16.11■□□□□ 0.17
NEK4-202ENST00000383721 FLAD1Q8NFF5 587 aa16.11■□□□□ 0.17
NEK4-202ENST00000383721 KCNG4Q8TDN1 519 aa16.11■□□□□ 0.17
NEK4-202ENST00000383721 SDF4Q9BRK5 362 aa16.11■□□□□ 0.17
NEK4-202ENST00000383721 DENND2AQ9ULE3 1009 aa16.11■□□□□ 0.17
NEK4-202ENST00000383721 NIP7Q9Y221 180 aaKnown RBP eCLIP16.11■□□□□ 0.17
NEK4-202ENST00000383721 NEDD4P46934 1319 aa16.1■□□□□ 0.17
NEK4-202ENST00000383721 KIF28PB7ZC32 967 aa16.1■□□□□ 0.17
NEK4-202ENST00000383721 SF3A1Q15459 793 aaKnown RBP16.1■□□□□ 0.17
NEK4-202ENST00000383721 NKX2-3Q8TAU0 364 aa16.1■□□□□ 0.17
NEK4-202ENST00000383721 FBXW7Q969H0 707 aa16.1■□□□□ 0.17
NEK4-202ENST00000383721 GREM2Q9H772 168 aa16.1■□□□□ 0.17
NEK4-202ENST00000383721 CPLX1O14810 134 aa16.1■□□□□ 0.17
NEK4-202ENST00000383721 TNNT1P13805 278 aa16.1■□□□□ 0.17
NEK4-202ENST00000383721 LDHAL6AQ6ZMR3 332 aa16.1■□□□□ 0.17
NEK4-202ENST00000383721 BRAPQ7Z569 592 aa16.1■□□□□ 0.17
NEK4-202ENST00000383721 ZNF34Q8IZ26 560 aa16.1■□□□□ 0.17
NEK4-202ENST00000383721 TTLL11Q8NHH1 800 aa16.1■□□□□ 0.17
NEK4-202ENST00000383721 WDR19Q8NEZ3 1342 aa16.09■□□□□ 0.17
NEK4-202ENST00000383721 SOCS7O14512 581 aa16.09■□□□□ 0.17
NEK4-202ENST00000383721 SPTLC2O15270 562 aa16.09■□□□□ 0.17
NEK4-202ENST00000383721 ITGA6P23229 1130 aa16.09■□□□□ 0.17
NEK4-202ENST00000383721 ADD2P35612 726 aa16.09■□□□□ 0.17
NEK4-202ENST00000383721 CLEC4GQ6UXB4 293 aa16.09■□□□□ 0.17
NEK4-202ENST00000383721 KIF23Q02241 960 aaPredicted RBP16.09■□□□□ 0.17
NEK4-202ENST00000383721 NFIXQ14938 502 aa16.09■□□□□ 0.17
NEK4-202ENST00000383721 NLRP10Q86W26 655 aa16.09■□□□□ 0.17
NEK4-202ENST00000383721 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.09■□□□□ 0.17
NEK4-202ENST00000383721 KIAA1468Q9P260 1216 aa16.09■□□□□ 0.17
NEK4-202ENST00000383721 ZNF652Q9Y2D9 606 aa16.09■□□□□ 0.17
NEK4-202ENST00000383721 CDHR2Q9BYE9 1310 aa16.09■□□□□ 0.17
NEK4-202ENST00000383721 QSER1Q2KHR3 1735 aa16.08■□□□□ 0.17
NEK4-202ENST00000383721 SLC9C2Q5TAH2 1124 aa16.08■□□□□ 0.17
NEK4-202ENST00000383721 TBC1D10CQ8IV04 446 aa16.08■□□□□ 0.17
NEK4-202ENST00000383721 VGLL2Q8N8G2 317 aa16.08■□□□□ 0.17
NEK4-202ENST00000383721 ANKRD7Q92527 254 aa16.08■□□□□ 0.17
NEK4-202ENST00000383721 NAT10Q9H0A0 1025 aaKnown RBP16.08■□□□□ 0.17
NEK4-202ENST00000383721 SMTNL1A8MU46 457 aa16.08■□□□□ 0.16
NEK4-202ENST00000383721 NEMFO60524 1076 aa16.08■□□□□ 0.16
NEK4-202ENST00000383721 ZBTB7AO95365 584 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms