RNA–Protein interactions for RNA: ENST00000381990.6

GPNMB-202, Transcript of glycoprotein nmb, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GPNMB, Length 2,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-202ENST00000381990 BICDL1Q6ZP65 573 aa10.39□□□□□ -0.75
GPNMB-202ENST00000381990 SMIM5Q71RC9 77 aa10.39□□□□□ -0.75
GPNMB-202ENST00000381990 SETDB2Q96T68 719 aa10.39□□□□□ -0.75
GPNMB-202ENST00000381990 QTRT2Q9H974 415 aaKnown RBP10.39□□□□□ -0.75
GPNMB-202ENST00000381990 C4BP0C0L5 1744 aa10.39□□□□□ -0.75
GPNMB-202ENST00000381990 TOB2Q14106 344 aaPredicted RBP10.38□□□□□ -0.75
GPNMB-202ENST00000381990 ARHGEF1Q92888 912 aaKnown RBP10.38□□□□□ -0.75
GPNMB-202ENST00000381990 GTF3C6Q969F1 213 aa10.38□□□□□ -0.75
GPNMB-202ENST00000381990 TFIP11Q9UBB9 837 aaKnown RBP10.38□□□□□ -0.75
GPNMB-202ENST00000381990 CASZ1Q86V15 1759 aa10.38□□□□□ -0.75
GPNMB-202ENST00000381990 BECN2A8MW95 431 aa10.38□□□□□ -0.75
GPNMB-202ENST00000381990 SLU7O95391 586 aaKnown RBP10.38□□□□□ -0.75
GPNMB-202ENST00000381990 HMGB1P09429 215 aaKnown RBP10.38□□□□□ -0.75
GPNMB-202ENST00000381990 RESTQ13127 1097 aa10.38□□□□□ -0.75
GPNMB-202ENST00000381990 COL9A3Q14050 684 aaPredicted RBP10.38□□□□□ -0.75
GPNMB-202ENST00000381990 KMT5BQ4FZB7 885 aa10.38□□□□□ -0.75
GPNMB-202ENST00000381990 ANKRD18AQ8IVF6 992 aa10.38□□□□□ -0.75
GPNMB-202ENST00000381990 NAT10Q9H0A0 1025 aaKnown RBP10.38□□□□□ -0.75
GPNMB-202ENST00000381990 IMPACTQ9P2X3 320 aa10.38□□□□□ -0.75
GPNMB-202ENST00000381990 ZNF215Q9UL58 517 aaPredicted RBP10.38□□□□□ -0.75
GPNMB-202ENST00000381990 ADD2P35612 726 aa10.37□□□□□ -0.75
GPNMB-202ENST00000381990 KCNJ6P48051 423 aa10.37□□□□□ -0.75
GPNMB-202ENST00000381990 CHRNDQ07001 517 aa10.37□□□□□ -0.75
GPNMB-202ENST00000381990 C3orf67Q6ZVT6 689 aa10.37□□□□□ -0.75
GPNMB-202ENST00000381990 CCAR2Q8N163 923 aaKnown RBP10.37□□□□□ -0.75
GPNMB-202ENST00000381990 ZNF592Q92610 1267 aa10.37□□□□□ -0.75
GPNMB-202ENST00000381990 LLPHQ9BRT6 129 aaKnown RBP10.37□□□□□ -0.75
GPNMB-202ENST00000381990 PIH1D3Q9NQM4 214 aaKnown RBP10.37□□□□□ -0.75
GPNMB-202ENST00000381990 ANO10Q9NW15 660 aa10.37□□□□□ -0.75
GPNMB-202ENST00000381990 H3BQV1 296 aa10.37□□□□□ -0.75
GPNMB-202ENST00000381990 UBE3CQ15386 1083 aa10.37□□□□□ -0.75
GPNMB-202ENST00000381990 IFFO2Q5TF58 517 aa10.37□□□□□ -0.75
GPNMB-202ENST00000381990 NBPF5PQ86XG9 351 aaPredicted RBP10.37□□□□□ -0.75
GPNMB-202ENST00000381990 C4AP0C0L4 1744 aa10.37□□□□□ -0.75
GPNMB-202ENST00000381990 MYO5AQ9Y4I1 1855 aaKnown RBP10.37□□□□□ -0.75
GPNMB-202ENST00000381990 CCDC69A6NI79 296 aa10.37□□□□□ -0.75
GPNMB-202ENST00000381990 CCZ1BP86790 482 aa10.37□□□□□ -0.75
GPNMB-202ENST00000381990 CCZ1P86791 482 aaPredicted RBP10.37□□□□□ -0.75
GPNMB-202ENST00000381990 SLC9C2Q5TAH2 1124 aa10.37□□□□□ -0.75
GPNMB-202ENST00000381990 NAA16Q6N069 864 aaPredicted RBP10.37□□□□□ -0.75
GPNMB-202ENST00000381990 TPTE2Q6XPS3 522 aa10.37□□□□□ -0.75
GPNMB-202ENST00000381990 STOX1Q6ZVD7 989 aa10.37□□□□□ -0.75
GPNMB-202ENST00000381990 SPATA5Q8NB90 893 aa10.37□□□□□ -0.75
GPNMB-202ENST00000381990 TCEANC2Q96MN5 208 aa10.37□□□□□ -0.75
GPNMB-202ENST00000381990 PUS7LQ9H0K6 701 aaKnown RBP10.37□□□□□ -0.75
GPNMB-202ENST00000381990 OSBPL5Q9H0X9 879 aaPredicted RBP10.37□□□□□ -0.75
GPNMB-202ENST00000381990 BSDC1Q9NW68 430 aaPredicted RBP10.37□□□□□ -0.75
GPNMB-202ENST00000381990 LAMA4Q16363 1823 aa10.36□□□□□ -0.75
GPNMB-202ENST00000381990 COL4A1P02462 1669 aa10.36□□□□□ -0.75
GPNMB-202ENST00000381990 SNAP23O00161 211 aa10.36□□□□□ -0.75
GPNMB-202ENST00000381990 GPAA1O43292 621 aa10.36□□□□□ -0.75
GPNMB-202ENST00000381990 IDH1O75874 414 aaKnown RBP10.36□□□□□ -0.75
GPNMB-202ENST00000381990 RFC4P35249 363 aa10.36□□□□□ -0.75
GPNMB-202ENST00000381990 RASGRF1Q13972 1273 aa10.36□□□□□ -0.75
GPNMB-202ENST00000381990 TRAPPC3LQ5T215 181 aa10.36□□□□□ -0.75
GPNMB-202ENST00000381990 CCDC73Q6ZRK6 1079 aa10.36□□□□□ -0.75
GPNMB-202ENST00000381990 AMIGO3Q86WK7 504 aa10.36□□□□□ -0.75
GPNMB-202ENST00000381990 CEP57L1Q8IYX8 460 aa10.36□□□□□ -0.75
GPNMB-202ENST00000381990 NLRP3Q96P20 1036 aa10.36□□□□□ -0.75
GPNMB-202ENST00000381990 RCOR1Q9UKL0 485 aa10.36□□□□□ -0.75
GPNMB-202ENST00000381990 A0A1B0GUL6 1792 aa10.36□□□□□ -0.75
GPNMB-202ENST00000381990 FOXP2O15409 715 aa10.36□□□□□ -0.75
GPNMB-202ENST00000381990 NRDCO43847 1150 aa10.36□□□□□ -0.75
GPNMB-202ENST00000381990 KINO60870 393 aaKnown RBP10.36□□□□□ -0.75
GPNMB-202ENST00000381990 IGSF3O75054 1194 aa10.36□□□□□ -0.75
GPNMB-202ENST00000381990 NAA30Q147X3 362 aaPredicted RBP10.36□□□□□ -0.75
GPNMB-202ENST00000381990 FAM196AQ6ZSG2 479 aa10.36□□□□□ -0.75
GPNMB-202ENST00000381990 DHX32Q7L7V1 743 aaKnown RBP10.36□□□□□ -0.75
GPNMB-202ENST00000381990 L2HGDHQ9H9P8 463 aa10.36□□□□□ -0.75
GPNMB-202ENST00000381990 DOCK2Q92608 1830 aa10.36□□□□□ -0.75
GPNMB-202ENST00000381990 MYH15Q9Y2K3 1946 aa10.35□□□□□ -0.75
GPNMB-202ENST00000381990 E7EWF7 191 aa10.35□□□□□ -0.75
GPNMB-202ENST00000381990 PDE6AP16499 860 aa10.35□□□□□ -0.75
GPNMB-202ENST00000381990 UBE4AQ14139 1066 aa10.35□□□□□ -0.75
GPNMB-202ENST00000381990 BMS1Q14692 1282 aaKnown RBP10.35□□□□□ -0.75
GPNMB-202ENST00000381990 FBXO38Q6PIJ6 1188 aa10.35□□□□□ -0.75
GPNMB-202ENST00000381990 BRF1Q92994 677 aa10.35□□□□□ -0.75
GPNMB-202ENST00000381990 CHMP4CQ96CF2 233 aa10.35□□□□□ -0.75
GPNMB-202ENST00000381990 LRRC4BQ9NT99 713 aa10.35□□□□□ -0.75
GPNMB-202ENST00000381990 TAF1P21675 1872 aa10.35□□□□□ -0.75
GPNMB-202ENST00000381990 PSDA5PKW4 1024 aaPredicted RBP10.35□□□□□ -0.75
GPNMB-202ENST00000381990 BCAMP50895 628 aa10.35□□□□□ -0.75
GPNMB-202ENST00000381990 FAM160A1Q05DH4 1040 aa10.35□□□□□ -0.75
GPNMB-202ENST00000381990 IMMTQ16891 758 aaKnown RBP10.35□□□□□ -0.75
GPNMB-202ENST00000381990 TTLL5Q6EMB2 1281 aa10.35□□□□□ -0.75
GPNMB-202ENST00000381990 Q6ZUG5 572 aa10.35□□□□□ -0.75
GPNMB-202ENST00000381990 C11orf57Q6ZUT1 292 aaPredicted RBP10.35□□□□□ -0.75
GPNMB-202ENST00000381990 DHX40Q8IX18 779 aaKnown RBP10.35□□□□□ -0.75
GPNMB-202ENST00000381990 CCDC150Q8NCX0 1101 aa10.35□□□□□ -0.75
GPNMB-202ENST00000381990 CALCOCO1Q9P1Z2 691 aa10.35□□□□□ -0.75
GPNMB-202ENST00000381990 ZNF532Q9HCE3 1301 aa10.35□□□□□ -0.75
GPNMB-202ENST00000381990 TCRBV5S4A2TA0A5A2 114 aa10.34□□□□□ -0.75
GPNMB-202ENST00000381990 USP27XA6NNY8 438 aa10.34□□□□□ -0.75
GPNMB-202ENST00000381990 FGAP02671 866 aa10.34□□□□□ -0.75
GPNMB-202ENST00000381990 MAP3K12Q12852 859 aa10.34□□□□□ -0.75
GPNMB-202ENST00000381990 KRT27Q7Z3Y8 459 aa10.34□□□□□ -0.75
GPNMB-202ENST00000381990 SMARCC2Q8TAQ2 1214 aa10.34□□□□□ -0.75
GPNMB-202ENST00000381990 ZNF396Q96N95 335 aaPredicted RBP10.34□□□□□ -0.75
GPNMB-202ENST00000381990 BPIFA3Q9BQP9 254 aa10.34□□□□□ -0.75
GPNMB-202ENST00000381990 MINPP1Q9UNW1 487 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms