RNA–Protein interactions for RNA: ENST00000381029.4

VCX3B-201, Transcript of variable charge X-linked 3B, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3B, Length 756 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3B-201ENST00000381029 RAI14Q9P0K7 980 aa18.06■□□□□ 0.48
VCX3B-201ENST00000381029 LRP2BPQ9P2M1 347 aa18.06■□□□□ 0.48
VCX3B-201ENST00000381029 FAM198AQ9UFP1 575 aa18.06■□□□□ 0.48
VCX3B-201ENST00000381029 TCP10L2B9ZVM9 353 aa18.05■□□□□ 0.48
VCX3B-201ENST00000381029 WDHD1O75717 1129 aaPredicted RBP18.05■□□□□ 0.48
VCX3B-201ENST00000381029 TNFAIP1Q13829 316 aa18.05■□□□□ 0.48
VCX3B-201ENST00000381029 PI4K2BQ8TCG2 481 aa18.05■□□□□ 0.48
VCX3B-201ENST00000381029 KLRG1Q96E93 195 aa18.05■□□□□ 0.48
VCX3B-201ENST00000381029 IDI2Q9BXS1 227 aa18.05■□□□□ 0.48
VCX3B-201ENST00000381029 BOLA2Q9H3K6 86 aa18.05■□□□□ 0.48
VCX3B-201ENST00000381029 ZNF408Q9H9D4 720 aa18.05■□□□□ 0.48
VCX3B-201ENST00000381029 ECHDC1Q9NTX5 307 aa18.05■□□□□ 0.48
VCX3B-201ENST00000381029 RPAP1Q9BWH6 1393 aaPredicted RBP18.04■□□□□ 0.48
VCX3B-201ENST00000381029 PAPPA2Q9BXP8 1791 aa18.04■□□□□ 0.48
VCX3B-201ENST00000381029 BTDP43251 543 aa18.04■□□□□ 0.48
VCX3B-201ENST00000381029 PPP4CP60510 307 aa18.04■□□□□ 0.48
VCX3B-201ENST00000381029 NBPF12Q5TAG4 269 aaPredicted RBP18.04■□□□□ 0.48
VCX3B-201ENST00000381029 TSHZ3Q63HK5 1081 aa18.04■□□□□ 0.48
VCX3B-201ENST00000381029 SLF2Q8IX21 1173 aa18.04■□□□□ 0.48
VCX3B-201ENST00000381029 TMEM39BQ9GZU3 492 aa18.04■□□□□ 0.48
VCX3B-201ENST00000381029 USP40Q9NVE5 1235 aa18.04■□□□□ 0.48
VCX3B-201ENST00000381029 PCNTO95613 3336 aa18.04■□□□□ 0.48
VCX3B-201ENST00000381029 FKBP1BP68106 108 aa18.03■□□□□ 0.48
VCX3B-201ENST00000381029 GSTO1P78417 241 aa18.03■□□□□ 0.48
VCX3B-201ENST00000381029 ANKRD45Q5TZF3 282 aa18.03■□□□□ 0.48
VCX3B-201ENST00000381029 NAA16Q6N069 864 aaPredicted RBP18.03■□□□□ 0.48
VCX3B-201ENST00000381029 MOB2Q70IA6 237 aa18.03■□□□□ 0.48
VCX3B-201ENST00000381029 ZFPM1Q8IX07 1006 aa18.03■□□□□ 0.48
VCX3B-201ENST00000381029 BCL11AQ9H165 835 aa18.03■□□□□ 0.48
VCX3B-201ENST00000381029 DDX4Q9NQI0 724 aaKnown RBP18.03■□□□□ 0.48
VCX3B-201ENST00000381029 TTC41PQ6P2S7 1318 aa18.02■□□□□ 0.48
VCX3B-201ENST00000381029 TCRBV5S4A2TA0A5A2 114 aa18.02■□□□□ 0.48
VCX3B-201ENST00000381029 GOLIM4O00461 696 aa18.02■□□□□ 0.48
VCX3B-201ENST00000381029 LDHCP07864 332 aa18.02■□□□□ 0.48
VCX3B-201ENST00000381029 NUCB1Q02818 461 aa18.02■□□□□ 0.48
VCX3B-201ENST00000381029 MAP3K11Q16584 847 aa18.02■□□□□ 0.48
VCX3B-201ENST00000381029 TMED8Q6PL24 325 aaPredicted RBP18.02■□□□□ 0.48
VCX3B-201ENST00000381029 JMYQ8N9B5 988 aa18.02■□□□□ 0.48
VCX3B-201ENST00000381029 DNAJC2Q99543 621 aaKnown RBP18.02■□□□□ 0.48
VCX3B-201ENST00000381029 PAG1Q9NWQ8 432 aa18.02■□□□□ 0.48
VCX3B-201ENST00000381029 STAP2Q9UGK3 403 aa18.02■□□□□ 0.48
VCX3B-201ENST00000381029 FZD1Q9UP38 647 aa18.02■□□□□ 0.48
VCX3B-201ENST00000381029 NPM3O75607 178 aaKnown RBP18.01■□□□□ 0.47
VCX3B-201ENST00000381029 IDH1O75874 414 aaKnown RBP18.01■□□□□ 0.47
VCX3B-201ENST00000381029 MAP4K4O95819 1239 aaPredicted RBP18.01■□□□□ 0.47
VCX3B-201ENST00000381029 VEGFBP49765 207 aa18.01■□□□□ 0.47
VCX3B-201ENST00000381029 TTF1Q15361 905 aaPredicted RBP18.01■□□□□ 0.47
VCX3B-201ENST00000381029 DEFB115Q30KQ5 88 aa18.01■□□□□ 0.47
VCX3B-201ENST00000381029 LDLRAD1Q5T700 205 aa18.01■□□□□ 0.47
VCX3B-201ENST00000381029 SH3BP5LQ7L8J4 393 aa18.01■□□□□ 0.47
VCX3B-201ENST00000381029 C2orf69Q8N8R5 385 aa18.01■□□□□ 0.47
VCX3B-201ENST00000381029 FAM151AQ8WW52 585 aa18.01■□□□□ 0.47
VCX3B-201ENST00000381029 MKRN1Q9UHC7 482 aaKnown RBP18.01■□□□□ 0.47
VCX3B-201ENST00000381029 ABT1Q9ULW3 272 aaKnown RBP18.01■□□□□ 0.47
VCX3B-201ENST00000381029 ATRNL1Q5VV63 1379 aa18.01■□□□□ 0.47
VCX3B-201ENST00000381029 THSD7BQ9C0I4 1608 aa18.01■□□□□ 0.47
VCX3B-201ENST00000381029 ENTPD3O75355 529 aa18■□□□□ 0.47
VCX3B-201ENST00000381029 MX1P20591 662 aa18■□□□□ 0.47
VCX3B-201ENST00000381029 TNNI2P48788 182 aa18■□□□□ 0.47
VCX3B-201ENST00000381029 HUNKP57058 714 aa18■□□□□ 0.47
VCX3B-201ENST00000381029 MAP3K12Q12852 859 aa18■□□□□ 0.47
VCX3B-201ENST00000381029 MAGEB6Q8N7X4 407 aa18■□□□□ 0.47
VCX3B-201ENST00000381029 TMOD2Q9NZR1 351 aa18■□□□□ 0.47
VCX3B-201ENST00000381029 FAM155AB1AL88 458 aaPredicted RBP17.99■□□□□ 0.47
VCX3B-201ENST00000381029 USP2O75604 605 aaPredicted RBP17.99■□□□□ 0.47
VCX3B-201ENST00000381029 CHGBP05060 677 aa17.99■□□□□ 0.47
VCX3B-201ENST00000381029 PDE6AP16499 860 aa17.99■□□□□ 0.47
VCX3B-201ENST00000381029 CYP7A1P22680 504 aa17.99■□□□□ 0.47
VCX3B-201ENST00000381029 RGS3P49796 1198 aa17.99■□□□□ 0.47
VCX3B-201ENST00000381029 PDE1AP54750 535 aa17.99■□□□□ 0.47
VCX3B-201ENST00000381029 SUPT20HL1Q3ZLR7 823 aa17.99■□□□□ 0.47
VCX3B-201ENST00000381029 CHD1LQ86WJ1 897 aa17.99■□□□□ 0.47
VCX3B-201ENST00000381029 SH3RF3Q8TEJ3 882 aaPredicted RBP17.99■□□□□ 0.47
VCX3B-201ENST00000381029 RIOK1Q9BRS2 568 aaKnown RBP17.99■□□□□ 0.47
VCX3B-201ENST00000381029 LNPKQ9C0E8 428 aa17.99■□□□□ 0.47
VCX3B-201ENST00000381029 UBE2Q2LH0YL09 131 aa17.98■□□□□ 0.47
VCX3B-201ENST00000381029 MAP3K10Q02779 954 aa17.98■□□□□ 0.47
VCX3B-201ENST00000381029 TCP10Q12799 353 aa17.98■□□□□ 0.47
VCX3B-201ENST00000381029 SLFNL1Q499Z3 407 aa17.98■□□□□ 0.47
VCX3B-201ENST00000381029 B4GALNT3Q6L9W6 998 aa17.98■□□□□ 0.47
VCX3B-201ENST00000381029 CYP4F22Q6NT55 531 aa17.98■□□□□ 0.47
VCX3B-201ENST00000381029 AATFQ9NY61 560 aaKnown RBP eCLIP17.98■□□□□ 0.47
VCX3B-201ENST00000381029 COL2A1P02458 1487 aaPredicted RBP17.97■□□□□ 0.47
VCX3B-201ENST00000381029 NF2P35240 595 aa17.97■□□□□ 0.47
VCX3B-201ENST00000381029 ADD2P35612 726 aa17.97■□□□□ 0.47
VCX3B-201ENST00000381029 DYNLL1P63167 89 aaKnown RBP17.97■□□□□ 0.47
VCX3B-201ENST00000381029 SLC9C2Q5TAH2 1124 aa17.97■□□□□ 0.47
VCX3B-201ENST00000381029 RGMBQ6NW40 437 aa17.97■□□□□ 0.47
VCX3B-201ENST00000381029 GPATCH3Q96I76 525 aa17.97■□□□□ 0.47
VCX3B-201ENST00000381029 CAPNS2Q96L46 248 aa17.97■□□□□ 0.47
VCX3B-201ENST00000381029 WDR33Q9C0J8 1336 aaKnown RBP17.97■□□□□ 0.47
VCX3B-201ENST00000381029 ZNF532Q9HCE3 1301 aa17.97■□□□□ 0.47
VCX3B-201ENST00000381029 DDTLA6NHG4 134 aaPredicted RBP17.96■□□□□ 0.47
VCX3B-201ENST00000381029 GLRX3O76003 335 aaKnown RBP17.96■□□□□ 0.47
VCX3B-201ENST00000381029 KBTBD3Q8NAB2 608 aa17.96■□□□□ 0.47
VCX3B-201ENST00000381029 MIGA1Q8NAN2 632 aa17.96■□□□□ 0.47
VCX3B-201ENST00000381029 OSBPL3Q9H4L5 887 aa17.96■□□□□ 0.47
VCX3B-201ENST00000381029 CDK5RAP2Q96SN8 1893 aa17.95■□□□□ 0.46
VCX3B-201ENST00000381029 UNCXA6NJT0 531 aa17.95■□□□□ 0.46
VCX3B-201ENST00000381029 BAG3O95817 575 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms