RNA–Protein interactions for RNA: ENST00000381018.7

TRIM23-203, Transcript of tripartite motif containing 23, humanhuman

TSL 1 (best) BASIC

Gene TRIM23, Length 1,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23-203ENST00000381018 ERCC4Q92889 916 aaPredicted RBP13.84□□□□□ -0.19
TRIM23-203ENST00000381018 SYTL4Q96C24 671 aaPredicted RBP13.84□□□□□ -0.19
TRIM23-203ENST00000381018 STRBPQ96SI9 672 aaKnown RBP13.84□□□□□ -0.19
TRIM23-203ENST00000381018 BPIFA3Q9BQP9 254 aa13.84□□□□□ -0.19
TRIM23-203ENST00000381018 DENND2AQ9ULE3 1009 aa13.84□□□□□ -0.19
TRIM23-203ENST00000381018 BCORQ6W2J9 1755 aa13.84□□□□□ -0.19
TRIM23-203ENST00000381018 NEDD4P46934 1319 aa13.83□□□□□ -0.2
TRIM23-203ENST00000381018 SLIT2O94813 1529 aa13.83□□□□□ -0.2
TRIM23-203ENST00000381018 ZBTB43O43298 467 aa13.83□□□□□ -0.2
TRIM23-203ENST00000381018 ZNF202O95125 648 aa13.83□□□□□ -0.2
TRIM23-203ENST00000381018 SLC3A2P08195 630 aaKnown RBP13.83□□□□□ -0.2
TRIM23-203ENST00000381018 SPATA5Q8NB90 893 aa13.83□□□□□ -0.2
TRIM23-203ENST00000381018 MYH6P13533 1939 aa13.83□□□□□ -0.2
TRIM23-203ENST00000381018 PATL2C9JE40 543 aaKnown RBP13.82□□□□□ -0.2
TRIM23-203ENST00000381018 EXOC5O00471 708 aa13.82□□□□□ -0.2
TRIM23-203ENST00000381018 MAP3K12Q12852 859 aa13.82□□□□□ -0.2
TRIM23-203ENST00000381018 SLC39A14Q15043 492 aa13.82□□□□□ -0.2
TRIM23-203ENST00000381018 AXDND1Q5T1B0 1012 aaPredicted RBP13.82□□□□□ -0.2
TRIM23-203ENST00000381018 NFXL1Q6ZNB6 911 aa13.82□□□□□ -0.2
TRIM23-203ENST00000381018 MICU3Q86XE3 530 aa13.82□□□□□ -0.2
TRIM23-203ENST00000381018 VPS37DQ86XT2 251 aa13.82□□□□□ -0.2
TRIM23-203ENST00000381018 ZNF710Q8N1W2 664 aa13.82□□□□□ -0.2
TRIM23-203ENST00000381018 HELBQ8NG08 1087 aaPredicted RBP13.82□□□□□ -0.2
TRIM23-203ENST00000381018 NKX2-3Q8TAU0 364 aa13.82□□□□□ -0.2
TRIM23-203ENST00000381018 IGDCC4Q8TDY8 1250 aa13.82□□□□□ -0.2
TRIM23-203ENST00000381018 TSC1Q92574 1164 aa13.82□□□□□ -0.2
TRIM23-203ENST00000381018 FBXW7Q969H0 707 aa13.82□□□□□ -0.2
TRIM23-203ENST00000381018 C16orf45Q96MC5 204 aaPredicted RBP13.82□□□□□ -0.2
TRIM23-203ENST00000381018 PFKFB1P16118 471 aa13.82□□□□□ -0.2
TRIM23-203ENST00000381018 RXRAP19793 462 aa13.82□□□□□ -0.2
TRIM23-203ENST00000381018 CDC27P30260 824 aa13.82□□□□□ -0.2
TRIM23-203ENST00000381018 RBM6P78332 1123 aaKnown RBP13.82□□□□□ -0.2
TRIM23-203ENST00000381018 GNL2Q13823 731 aaKnown RBP13.82□□□□□ -0.2
TRIM23-203ENST00000381018 DPCR1Q3MIW9 517 aa13.82□□□□□ -0.2
TRIM23-203ENST00000381018 TMEM67Q5HYA8 995 aa13.82□□□□□ -0.2
TRIM23-203ENST00000381018 KRT40Q6A162 431 aa13.82□□□□□ -0.2
TRIM23-203ENST00000381018 SGMS1Q86VZ5 419 aa13.82□□□□□ -0.2
TRIM23-203ENST00000381018 JMYQ8N9B5 988 aa13.82□□□□□ -0.2
TRIM23-203ENST00000381018 AIFM3Q96NN9 605 aa13.82□□□□□ -0.2
TRIM23-203ENST00000381018 NAPBQ9H115 298 aa13.82□□□□□ -0.2
TRIM23-203ENST00000381018 CNNM2Q9H8M5 875 aa13.82□□□□□ -0.2
TRIM23-203ENST00000381018 LY9Q9HBG7 655 aa13.82□□□□□ -0.2
TRIM23-203ENST00000381018 COL16A1Q07092 1604 aaPredicted RBP13.81□□□□□ -0.2
TRIM23-203ENST00000381018 MROH7-TTC4A0A0A0MT08 1334 aa13.81□□□□□ -0.2
TRIM23-203ENST00000381018 GOLGA8AA7E2F4 631 aa13.81□□□□□ -0.2
TRIM23-203ENST00000381018 PPP6R2O75170 966 aa13.81□□□□□ -0.2
TRIM23-203ENST00000381018 MBD4O95243 580 aa13.81□□□□□ -0.2
TRIM23-203ENST00000381018 TNNT1P13805 278 aa13.81□□□□□ -0.2
TRIM23-203ENST00000381018 IARSP41252 1262 aaKnown RBP13.81□□□□□ -0.2
TRIM23-203ENST00000381018 LIFRP42702 1097 aa13.81□□□□□ -0.2
TRIM23-203ENST00000381018 NLRP12P59046 1061 aa13.81□□□□□ -0.2
TRIM23-203ENST00000381018 TPM4P67936 248 aa13.81□□□□□ -0.2
TRIM23-203ENST00000381018 RASGRF1Q13972 1273 aa13.81□□□□□ -0.2
TRIM23-203ENST00000381018 TRIM29Q14134 588 aa13.81□□□□□ -0.2
TRIM23-203ENST00000381018 TPD52L1Q16890 204 aaPredicted RBP13.81□□□□□ -0.2
TRIM23-203ENST00000381018 IFNL3Q8IZI9 196 aa13.81□□□□□ -0.2
TRIM23-203ENST00000381018 MAGEB6Q8N7X4 407 aa13.81□□□□□ -0.2
TRIM23-203ENST00000381018 PHKBQ93100 1093 aa13.81□□□□□ -0.2
TRIM23-203ENST00000381018 BCL2L12Q9HB09 334 aa13.81□□□□□ -0.2
TRIM23-203ENST00000381018 EPB41L4AQ9HCS5 686 aaPredicted RBP13.81□□□□□ -0.2
TRIM23-203ENST00000381018 RREB1Q92766 1687 aa13.81□□□□□ -0.2
TRIM23-203ENST00000381018 STK36Q9NRP7 1315 aa13.81□□□□□ -0.2
TRIM23-203ENST00000381018 SMTNL1A8MU46 457 aa13.8□□□□□ -0.2
TRIM23-203ENST00000381018 CTIFO43310 598 aaKnown RBP13.8□□□□□ -0.2
TRIM23-203ENST00000381018 GSDMDP57764 484 aa13.8□□□□□ -0.2
TRIM23-203ENST00000381018 TIGD1Q96MW7 591 aa13.8□□□□□ -0.2
TRIM23-203ENST00000381018 MPHOSPH8Q99549 860 aa13.8□□□□□ -0.2
TRIM23-203ENST00000381018 SENP2Q9HC62 589 aa13.8□□□□□ -0.2
TRIM23-203ENST00000381018 COL22A1Q8NFW1 1626 aaPredicted RBP13.8□□□□□ -0.2
TRIM23-203ENST00000381018 CCDC69A6NI79 296 aa13.8□□□□□ -0.2
TRIM23-203ENST00000381018 IFIT3O14879 490 aaKnown RBP13.8□□□□□ -0.2
TRIM23-203ENST00000381018 WDHD1O75717 1129 aaPredicted RBP13.8□□□□□ -0.2
TRIM23-203ENST00000381018 SKILP12757 684 aa13.8□□□□□ -0.2
TRIM23-203ENST00000381018 MARCKSP29966 332 aaPredicted RBP13.8□□□□□ -0.2
TRIM23-203ENST00000381018 NTRK3Q16288 839 aa13.8□□□□□ -0.2
TRIM23-203ENST00000381018 FILIP1Q7Z7B0 1213 aa13.8□□□□□ -0.2
TRIM23-203ENST00000381018 KRT23Q9C075 422 aa13.8□□□□□ -0.2
TRIM23-203ENST00000381018 IMPACTQ9P2X3 320 aa13.8□□□□□ -0.2
TRIM23-203ENST00000381018 PAXBP1Q9Y5B6 917 aa13.8□□□□□ -0.2
TRIM23-203ENST00000381018 SLC12A7Q9Y666 1083 aa13.8□□□□□ -0.2
TRIM23-203ENST00000381018 RANBP6O60518 1105 aaKnown RBP13.79□□□□□ -0.2
TRIM23-203ENST00000381018 GNAT2P19087 354 aa13.79□□□□□ -0.2
TRIM23-203ENST00000381018 U2AF2P26368 475 aaKnown RBP eCLIP13.79□□□□□ -0.2
TRIM23-203ENST00000381018 SYKP43405 635 aa13.79□□□□□ -0.2
TRIM23-203ENST00000381018 EIF5P55010 431 aaKnown RBP13.79□□□□□ -0.2
TRIM23-203ENST00000381018 CTDSPL2Q05D32 466 aa13.79□□□□□ -0.2
TRIM23-203ENST00000381018 SSRP1Q08945 709 aaKnown RBP13.79□□□□□ -0.2
TRIM23-203ENST00000381018 ARID5BQ14865 1188 aa13.79□□□□□ -0.2
TRIM23-203ENST00000381018 AKNAD1Q5T1N1 836 aa13.79□□□□□ -0.2
TRIM23-203ENST00000381018 SUSD4Q5VX71 490 aa13.79□□□□□ -0.2
TRIM23-203ENST00000381018 UTP14AQ9BVJ6 771 aaKnown RBP13.79□□□□□ -0.2
TRIM23-203ENST00000381018 ARMT1Q9H993 441 aa13.79□□□□□ -0.2
TRIM23-203ENST00000381018 ZSWIM5Q9P217 1185 aa13.79□□□□□ -0.2
TRIM23-203ENST00000381018 NID2Q14112 1375 aa13.79□□□□□ -0.2
TRIM23-203ENST00000381018 A0A1B0GUL6 1792 aa13.78□□□□□ -0.2
TRIM23-203ENST00000381018 FAM177BA6PVY3 158 aa13.78□□□□□ -0.2
TRIM23-203ENST00000381018 BIN1O00499 593 aa13.78□□□□□ -0.2
TRIM23-203ENST00000381018 CCZ1BP86790 482 aa13.78□□□□□ -0.2
TRIM23-203ENST00000381018 CCZ1P86791 482 aaPredicted RBP13.78□□□□□ -0.2
TRIM23-203ENST00000381018 PTPAQ15257 358 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms