RNA–Protein interactions for RNA: ENST00000380749.9

HMGN1-204, Transcript of high mobility group nucleosome binding domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN1, Length 1,383 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-204ENST00000380749 CNKSR2Q8WXI2 1034 aa21.41■■□□□ 1.02
HMGN1-204ENST00000380749 DAGLAQ9Y4D2 1042 aa21.41■■□□□ 1.02
HMGN1-204ENST00000380749 SPDYE5A6NIY4 337 aa21.4■■□□□ 1.02
HMGN1-204ENST00000380749 PRDX5P30044 214 aa21.4■■□□□ 1.02
HMGN1-204ENST00000380749 DIXDC1Q155Q3 683 aa21.4■■□□□ 1.02
HMGN1-204ENST00000380749 MS4A4AQ96JQ5 239 aa21.4■■□□□ 1.02
HMGN1-204ENST00000380749 PTPN18Q99952 460 aa21.4■■□□□ 1.02
HMGN1-204ENST00000380749 IPO8O15397 1037 aaKnown RBP21.39■■□□□ 1.02
HMGN1-204ENST00000380749 PHKA1P46020 1223 aa21.39■■□□□ 1.02
HMGN1-204ENST00000380749 TAF1CQ15572 869 aaPredicted RBP21.39■■□□□ 1.02
HMGN1-204ENST00000380749 OTOP1Q7RTM1 612 aa21.39■■□□□ 1.02
HMGN1-204ENST00000380749 ERO1BQ86YB8 467 aa21.39■■□□□ 1.02
HMGN1-204ENST00000380749 ZGPATQ8N5A5 531 aaKnown RBP21.39■■□□□ 1.02
HMGN1-204ENST00000380749 BRI3BPQ8WY22 251 aa21.39■■□□□ 1.02
HMGN1-204ENST00000380749 ZNF341Q9BYN7 854 aa21.39■■□□□ 1.02
HMGN1-204ENST00000380749 SNCAIPQ9Y6H5 919 aa21.39■■□□□ 1.02
HMGN1-204ENST00000380749 WDHD1O75717 1129 aaPredicted RBP21.38■■□□□ 1.01
HMGN1-204ENST00000380749 FAM151AQ8WW52 585 aa21.38■■□□□ 1.01
HMGN1-204ENST00000380749 PTPRFP10586 1907 aa21.38■■□□□ 1.01
HMGN1-204ENST00000380749 ZBTB22O15209 634 aa21.37■■□□□ 1.01
HMGN1-204ENST00000380749 SRGAP3O43295 1099 aa21.37■■□□□ 1.01
HMGN1-204ENST00000380749 SP3Q02447 781 aa21.37■■□□□ 1.01
HMGN1-204ENST00000380749 CCDC102BQ68D86 513 aa21.37■■□□□ 1.01
HMGN1-204ENST00000380749 CDC42EP5Q6NZY7 148 aa21.37■■□□□ 1.01
HMGN1-204ENST00000380749 CD99L2Q8TCZ2 262 aa21.37■■□□□ 1.01
HMGN1-204ENST00000380749 ZFYVE28Q9HCC9 887 aa21.37■■□□□ 1.01
HMGN1-204ENST00000380749 DOCK1Q14185 1865 aa21.37■■□□□ 1.01
HMGN1-204ENST00000380749 ZSWIM8A7E2V4 1837 aa21.37■■□□□ 1.01
HMGN1-204ENST00000380749 CETPP11597 493 aa21.36■■□□□ 1.01
HMGN1-204ENST00000380749 ADORA1P30542 326 aa21.36■■□□□ 1.01
HMGN1-204ENST00000380749 MTX1Q13505 466 aa21.36■■□□□ 1.01
HMGN1-204ENST00000380749 AKAP2Q9Y2D5 859 aa21.36■■□□□ 1.01
HMGN1-204ENST00000380749 PDS5AQ29RF7 1337 aaKnown RBP21.36■■□□□ 1.01
HMGN1-204ENST00000380749 PPIL2Q13356 520 aa21.36■■□□□ 1.01
HMGN1-204ENST00000380749 SNAPC2Q13487 334 aa21.36■■□□□ 1.01
HMGN1-204ENST00000380749 ZKSCAN4Q969J2 545 aaPredicted RBP21.36■■□□□ 1.01
HMGN1-204ENST00000380749 EFCC1Q9HA90 598 aa21.36■■□□□ 1.01
HMGN1-204ENST00000380749 MAST2Q6P0Q8 1798 aa21.35■■□□□ 1.01
HMGN1-204ENST00000380749 TRIM27P14373 513 aa21.35■■□□□ 1.01
HMGN1-204ENST00000380749 TCP10Q12799 353 aa21.35■■□□□ 1.01
HMGN1-204ENST00000380749 MVPQ14764 893 aaKnown RBP21.35■■□□□ 1.01
HMGN1-204ENST00000380749 ATF7IPQ6VMQ6 1270 aa21.35■■□□□ 1.01
HMGN1-204ENST00000380749 MIGA2Q7L4E1 593 aa21.35■■□□□ 1.01
HMGN1-204ENST00000380749 DZIP1Q86YF9 867 aaKnown RBP21.35■■□□□ 1.01
HMGN1-204ENST00000380749 FRAT1Q92837 279 aaPredicted RBP21.35■■□□□ 1.01
HMGN1-204ENST00000380749 ZCCHC17Q9NP64 241 aaKnown RBP21.35■■□□□ 1.01
HMGN1-204ENST00000380749 A0A1B0GUL7 405 aa21.34■■□□□ 1.01
HMGN1-204ENST00000380749 IRF6O14896 467 aa21.34■■□□□ 1.01
HMGN1-204ENST00000380749 NFIAQ12857 509 aa21.34■■□□□ 1.01
HMGN1-204ENST00000380749 RASGRF1Q13972 1273 aa21.34■■□□□ 1.01
HMGN1-204ENST00000380749 ARHGEF6Q15052 776 aa21.34■■□□□ 1.01
HMGN1-204ENST00000380749 SLF2Q8IX21 1173 aa21.34■■□□□ 1.01
HMGN1-204ENST00000380749 FAM43AQ8N2R8 423 aa21.34■■□□□ 1.01
HMGN1-204ENST00000380749 USP40Q9NVE5 1235 aa21.34■■□□□ 1.01
HMGN1-204ENST00000380749 PTPN22Q9Y2R2 807 aa21.34■■□□□ 1.01
HMGN1-204ENST00000380749 ATAD5Q96QE3 1844 aa21.33■■□□□ 1.01
HMGN1-204ENST00000380749 MGAMO43451 1857 aa21.33■■□□□ 1.01
HMGN1-204ENST00000380749 GNAI2P04899 355 aa21.33■■□□□ 1
HMGN1-204ENST00000380749 PPATQ06203 517 aa21.33■■□□□ 1
HMGN1-204ENST00000380749 SPTY2D1Q68D10 685 aaPredicted RBP21.33■■□□□ 1
HMGN1-204ENST00000380749 ABCF2Q9UG63 623 aa21.33■■□□□ 1
HMGN1-204ENST00000380749 GAKO14976 1311 aa21.33■■□□□ 1
HMGN1-204ENST00000380749 CEP290O15078 2479 aa21.32■■□□□ 1
HMGN1-204ENST00000380749 INPP5BP32019 993 aa21.32■■□□□ 1
HMGN1-204ENST00000380749 TIMM10P62072 90 aa21.32■■□□□ 1
HMGN1-204ENST00000380749 TFCP2Q12800 502 aa21.32■■□□□ 1
HMGN1-204ENST00000380749 XAGE2Q96GT9 111 aa21.32■■□□□ 1
HMGN1-204ENST00000380749 FAM198AQ9UFP1 575 aa21.32■■□□□ 1
HMGN1-204ENST00000380749 PHIPQ8WWQ0 1821 aa21.31■■□□□ 1
HMGN1-204ENST00000380749 BCAR3O75815 825 aa21.31■■□□□ 1
HMGN1-204ENST00000380749 RFX7Q2KHR2 1363 aa21.31■■□□□ 1
HMGN1-204ENST00000380749 CDK5RAP2Q96SN8 1893 aa21.31■■□□□ 1
HMGN1-204ENST00000380749 MYO5AQ9Y4I1 1855 aaKnown RBP21.31■■□□□ 1
HMGN1-204ENST00000380749 CLUAP1Q96AJ1 413 aa21.3■■□□□ 1
HMGN1-204ENST00000380749 ZNF112Q9UJU3 913 aa21.3■■□□□ 1
HMGN1-204ENST00000380749 BTBD19C9JJ37 291 aa21.29■■□□□ 1
HMGN1-204ENST00000380749 ENTPD3O75355 529 aa21.29■■□□□ 1
HMGN1-204ENST00000380749 RGS3P49796 1198 aa21.29■■□□□ 1
HMGN1-204ENST00000380749 NOL9Q5SY16 702 aaKnown RBP21.29■■□□□ 1
HMGN1-204ENST00000380749 GORABQ5T7V8 394 aa21.29■■□□□ 1
HMGN1-204ENST00000380749 NEUROD6Q96NK8 337 aa21.29■■□□□ 1
HMGN1-204ENST00000380749 IDI2Q9BXS1 227 aa21.29■■□□□ 1
HMGN1-204ENST00000380749 TNNQ9UQP3 1299 aa21.29■■□□□ 1
HMGN1-204ENST00000380749 MROH7-TTC4A0A0A0MT08 1334 aa21.28■■□□□ 1
HMGN1-204ENST00000380749 TLR2O60603 784 aa21.28■■□□□ 1
HMGN1-204ENST00000380749 G3BP1Q13283 466 aaKnown RBP eCLIP21.28■■□□□ 1
HMGN1-204ENST00000380749 KIF22Q14807 665 aa21.28■■□□□ 1
HMGN1-204ENST00000380749 FOCADQ5VW36 1801 aa21.28■■□□□ 1
HMGN1-204ENST00000380749 ZKSCAN2Q63HK3 967 aa21.28■■□□□ 1
HMGN1-204ENST00000380749 ERICH6Q7L0X2 663 aa21.28■■□□□ 1
HMGN1-204ENST00000380749 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.28■■□□□ 1
HMGN1-204ENST00000380749 ATRNL1Q5VV63 1379 aa21.27■■□□□ 1
HMGN1-204ENST00000380749 BTDP43251 543 aa21.27■■□□□ 1
HMGN1-204ENST00000380749 PRPF38BQ5VTL8 546 aaKnown RBP21.27■■□□□ 1
HMGN1-204ENST00000380749 ZSCAN29Q8IWY8 852 aaPredicted RBP21.27■■□□□ 1
HMGN1-204ENST00000380749 ARMC5Q96C12 935 aa21.27■■□□□ 1
HMGN1-204ENST00000380749 HNRNPUQ00839 825 aaKnown RBP eCLIP21.26■□□□□ 0.99
HMGN1-204ENST00000380749 FAM163AQ96GL9 167 aaPredicted RBP21.26■□□□□ 0.99
HMGN1-204ENST00000380749 KCNH4Q9UQ05 1017 aa21.26■□□□□ 0.99
HMGN1-204ENST00000380749 PNMA6EA0A0J9YXQ4 647 aa21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms