RNA–Protein interactions for RNA: ENST00000379868.5

DDX58-201, Transcript of DExD/H-box helicase 58, humanhuman

TSL 5 BASIC

Gene DDX58, Length 4,089 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX58-201ENST00000379868 VAT1LQ9HCJ6 419 aa6.64□□□□□ -1.35
DDX58-201ENST00000379868 NOP58Q9Y2X3 529 aaKnown RBP6.64□□□□□ -1.35
DDX58-201ENST00000379868 NRAPQ86VF7 1730 aa6.64□□□□□ -1.35
DDX58-201ENST00000379868 NWD2Q9ULI1 1742 aa6.64□□□□□ -1.35
DDX58-201ENST00000379868 DLEC1Q9Y238 1755 aa6.64□□□□□ -1.35
DDX58-201ENST00000379868 PSMD14O00487 310 aa6.64□□□□□ -1.35
DDX58-201ENST00000379868 POLA2Q14181 598 aa6.64□□□□□ -1.35
DDX58-201ENST00000379868 KRT32Q14532 448 aa6.64□□□□□ -1.35
DDX58-201ENST00000379868 SAMD7Q7Z3H4 446 aa6.64□□□□□ -1.35
DDX58-201ENST00000379868 KRT26Q7Z3Y9 468 aa6.64□□□□□ -1.35
DDX58-201ENST00000379868 SEC62Q99442 399 aaKnown RBP6.64□□□□□ -1.35
DDX58-201ENST00000379868 LARP6Q9BRS8 491 aaKnown RBP6.64□□□□□ -1.35
DDX58-201ENST00000379868 SEMA3EO15041 775 aa6.63□□□□□ -1.35
DDX58-201ENST00000379868 PPFIA3O75145 1194 aa6.63□□□□□ -1.35
DDX58-201ENST00000379868 GNAT2P19087 354 aa6.63□□□□□ -1.35
DDX58-201ENST00000379868 MIGA2Q7L4E1 593 aa6.63□□□□□ -1.35
DDX58-201ENST00000379868 CSRNP1Q96S65 589 aa6.63□□□□□ -1.35
DDX58-201ENST00000379868 LRRC2Q9BYS8 371 aa6.63□□□□□ -1.35
DDX58-201ENST00000379868 ZNF646O15015 1829 aaPredicted RBP6.63□□□□□ -1.35
DDX58-201ENST00000379868 USP17L12C9JPN9 530 aa6.63□□□□□ -1.35
DDX58-201ENST00000379868 USP17L21D6R901 530 aa6.63□□□□□ -1.35
DDX58-201ENST00000379868 GOLGA6L22H0YM25 854 aa6.63□□□□□ -1.35
DDX58-201ENST00000379868 MCAMP43121 646 aa6.63□□□□□ -1.35
DDX58-201ENST00000379868 USP48Q86UV5 1035 aa6.63□□□□□ -1.35
DDX58-201ENST00000379868 TXNRD3Q86VQ6 643 aa6.63□□□□□ -1.35
DDX58-201ENST00000379868 CCDC144CPQ8IYA2 1237 aa6.63□□□□□ -1.35
DDX58-201ENST00000379868 KAZALD1Q96I82 304 aa6.63□□□□□ -1.35
DDX58-201ENST00000379868 GPR108Q9NPR9 543 aa6.63□□□□□ -1.35
DDX58-201ENST00000379868 COL5A3P25940 1745 aaPredicted RBP6.63□□□□□ -1.35
DDX58-201ENST00000379868 BCORQ6W2J9 1755 aa6.63□□□□□ -1.35
DDX58-201ENST00000379868 VPS37CA5D8V6 355 aaPredicted RBP6.63□□□□□ -1.35
DDX58-201ENST00000379868 CRKP46108 304 aa6.63□□□□□ -1.35
DDX58-201ENST00000379868 DYNLL1P63167 89 aaKnown RBP6.63□□□□□ -1.35
DDX58-201ENST00000379868 KIF4BQ2VIQ3 1234 aa6.63□□□□□ -1.35
DDX58-201ENST00000379868 ATG9AQ7Z3C6 839 aa6.63□□□□□ -1.35
DDX58-201ENST00000379868 ESR2Q92731 530 aa6.63□□□□□ -1.35
DDX58-201ENST00000379868 HOOK2Q96ED9 719 aa6.63□□□□□ -1.35
DDX58-201ENST00000379868 KIF2CQ99661 725 aa6.63□□□□□ -1.35
DDX58-201ENST00000379868 RBM8AQ9Y5S9 174 aaKnown RBP6.63□□□□□ -1.35
DDX58-201ENST00000379868 MECOMQ03112 1051 aa6.62□□□□□ -1.35
DDX58-201ENST00000379868 CXCL9Q07325 125 aa6.62□□□□□ -1.35
DDX58-201ENST00000379868 KIAA2012Q0VF49 1180 aa6.62□□□□□ -1.35
DDX58-201ENST00000379868 ZRSR1Q15695 479 aaKnown RBP6.62□□□□□ -1.35
DDX58-201ENST00000379868 TMEM67Q5HYA8 995 aa6.62□□□□□ -1.35
DDX58-201ENST00000379868 PRAMEF18Q5VWM3 479 aa6.62□□□□□ -1.35
DDX58-201ENST00000379868 CHST3Q7LGC8 479 aa6.62□□□□□ -1.35
DDX58-201ENST00000379868 CTCFLQ8NI51 663 aaPredicted RBP6.62□□□□□ -1.35
DDX58-201ENST00000379868 HAUS7Q99871 368 aa6.62□□□□□ -1.35
DDX58-201ENST00000379868 HACL1Q9UJ83 578 aa6.62□□□□□ -1.35
DDX58-201ENST00000379868 CCDC171Q6TFL3 1326 aa6.62□□□□□ -1.35
DDX58-201ENST00000379868 PLS1Q14651 629 aa6.62□□□□□ -1.35
DDX58-201ENST00000379868 DCAF15Q66K64 600 aa6.62□□□□□ -1.35
DDX58-201ENST00000379868 MICU3Q86XE3 530 aa6.62□□□□□ -1.35
DDX58-201ENST00000379868 HOMER1Q86YM7 354 aa6.62□□□□□ -1.35
DDX58-201ENST00000379868 ZKSCAN3Q9BRR0 538 aa6.62□□□□□ -1.35
DDX58-201ENST00000379868 KAT14Q9H8E8 782 aa6.62□□□□□ -1.35
DDX58-201ENST00000379868 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.62□□□□□ -1.35
DDX58-201ENST00000379868 MYH7P12883 1935 aa6.62□□□□□ -1.35
DDX58-201ENST00000379868 MYO3BQ8WXR4 1341 aa6.62□□□□□ -1.35
DDX58-201ENST00000379868 WTIPA6NIX2 430 aaPredicted RBP6.62□□□□□ -1.35
DDX58-201ENST00000379868 SCARF1Q14162 830 aa6.62□□□□□ -1.35
DDX58-201ENST00000379868 SAFBQ15424 915 aaKnown RBP eCLIP6.62□□□□□ -1.35
DDX58-201ENST00000379868 SUPT20HL1Q3ZLR7 823 aa6.62□□□□□ -1.35
DDX58-201ENST00000379868 TRIM22Q8IYM9 498 aa6.62□□□□□ -1.35
DDX58-201ENST00000379868 SMC3Q9UQE7 1217 aa6.62□□□□□ -1.35
DDX58-201ENST00000379868 VEGFAP15692 232 aaPredicted RBP6.61□□□□□ -1.35
DDX58-201ENST00000379868 HOXA10P31260 410 aaPredicted RBP6.61□□□□□ -1.35
DDX58-201ENST00000379868 SF3A1Q15459 793 aaKnown RBP6.61□□□□□ -1.35
DDX58-201ENST00000379868 STRIP1Q5VSL9 837 aa6.61□□□□□ -1.35
DDX58-201ENST00000379868 NCOA7Q8NI08 942 aa6.61□□□□□ -1.35
DDX58-201ENST00000379868 ESYT1Q9BSJ8 1104 aa6.61□□□□□ -1.35
DDX58-201ENST00000379868 PIH1D3Q9NQM4 214 aaKnown RBP6.61□□□□□ -1.35
DDX58-201ENST00000379868 PDRG1Q9NUG6 133 aa6.61□□□□□ -1.35
DDX58-201ENST00000379868 PALD1Q9ULE6 856 aa6.61□□□□□ -1.35
DDX58-201ENST00000379868 ITGB4P16144 1822 aa6.61□□□□□ -1.35
DDX58-201ENST00000379868 XBP1P17861 261 aa6.61□□□□□ -1.35
DDX58-201ENST00000379868 CHMLP26374 656 aa6.61□□□□□ -1.35
DDX58-201ENST00000379868 SLFNL1Q499Z3 407 aa6.61□□□□□ -1.35
DDX58-201ENST00000379868 GGA3Q9NZ52 723 aa6.61□□□□□ -1.35
DDX58-201ENST00000379868 SLC12A7Q9Y666 1083 aa6.61□□□□□ -1.35
DDX58-201ENST00000379868 RGL2O15211 777 aa6.61□□□□□ -1.35
DDX58-201ENST00000379868 CHMP4BP1P59074 171 aa6.61□□□□□ -1.35
DDX58-201ENST00000379868 RSBN1LQ6PCB5 846 aaPredicted RBP6.61□□□□□ -1.35
DDX58-201ENST00000379868 CATIPQ7Z7H3 387 aa6.61□□□□□ -1.35
DDX58-201ENST00000379868 ANGEL1Q9UNK9 670 aaKnown RBP6.61□□□□□ -1.35
DDX58-201ENST00000379868 CYP2E1P05181 493 aaPredicted RBP6.6□□□□□ -1.35
DDX58-201ENST00000379868 ANGEL2Q5VTE6 544 aaKnown RBP6.6□□□□□ -1.35
DDX58-201ENST00000379868 CERS3Q8IU89 383 aa6.6□□□□□ -1.35
DDX58-201ENST00000379868 SMCR8Q8TEV9 937 aaPredicted RBP6.6□□□□□ -1.35
DDX58-201ENST00000379868 RRAGCQ9HB90 399 aa6.6□□□□□ -1.35
DDX58-201ENST00000379868 FAM196BA6NMK8 535 aa6.6□□□□□ -1.35
DDX58-201ENST00000379868 IFIT1BQ5T764 474 aaKnown RBP6.6□□□□□ -1.35
DDX58-201ENST00000379868 LRP10Q7Z4F1 713 aa6.6□□□□□ -1.35
DDX58-201ENST00000379868 DDX11Q96FC9 970 aa6.6□□□□□ -1.35
DDX58-201ENST00000379868 NEK1Q96PY6 1258 aa6.6□□□□□ -1.35
DDX58-201ENST00000379868 HELLSQ9NRZ9 838 aa6.6□□□□□ -1.35
DDX58-201ENST00000379868 TMOD4Q9NZQ9 345 aa6.6□□□□□ -1.35
DDX58-201ENST00000379868 SEC63Q9UGP8 760 aaKnown RBP6.6□□□□□ -1.35
DDX58-201ENST00000379868 A0A0D9SFI3 127 aa6.6□□□□□ -1.35
DDX58-201ENST00000379868 GOLGA8BA8MQT2 603 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms