RNA–Protein interactions for RNA: ENST00000379692.8

NDNF-201, Transcript of neuron derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDNF, Length 2,885 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDNF-201ENST00000379692 APOA5Q6Q788 366 aa17.28■□□□□ 0.36
NDNF-201ENST00000379692 SLC4A4Q9Y6R1 1079 aa17.28■□□□□ 0.36
NDNF-201ENST00000379692 GTF2E1P29083 439 aaPredicted RBP17.27■□□□□ 0.36
NDNF-201ENST00000379692 CAVIN4Q5BKX8 364 aa17.27■□□□□ 0.36
NDNF-201ENST00000379692 RIOK1Q9BRS2 568 aaKnown RBP17.27■□□□□ 0.36
NDNF-201ENST00000379692 SENP2Q9HC62 589 aa17.27■□□□□ 0.36
NDNF-201ENST00000379692 DDX19AQ9NUU7 478 aaKnown RBP17.27■□□□□ 0.36
NDNF-201ENST00000379692 ANAPC4Q9UJX5 808 aa17.27■□□□□ 0.36
NDNF-201ENST00000379692 FBXO18Q8NFZ0 1043 aa17.27■□□□□ 0.36
NDNF-201ENST00000379692 NACAP1Q9BZK3 213 aa17.27■□□□□ 0.36
NDNF-201ENST00000379692 KRT23Q9C075 422 aa17.27■□□□□ 0.36
NDNF-201ENST00000379692 ANKRD2Q9GZV1 360 aa17.27■□□□□ 0.36
NDNF-201ENST00000379692 DUOX1Q9NRD9 1551 aa17.27■□□□□ 0.35
NDNF-201ENST00000379692 CCDC88AQ3V6T2 1871 aa17.27■□□□□ 0.35
NDNF-201ENST00000379692 CYP7A1P22680 504 aa17.26■□□□□ 0.35
NDNF-201ENST00000379692 CTDSPL2Q05D32 466 aa17.26■□□□□ 0.35
NDNF-201ENST00000379692 ZNF384Q8TF68 577 aa17.26■□□□□ 0.35
NDNF-201ENST00000379692 NUP62CLQ9H1M0 184 aa17.26■□□□□ 0.35
NDNF-201ENST00000379692 ZSWIM5Q9P217 1185 aa17.26■□□□□ 0.35
NDNF-201ENST00000379692 ORC3Q9UBD5 711 aaPredicted RBP17.26■□□□□ 0.35
NDNF-201ENST00000379692 ZNF396Q96N95 335 aaPredicted RBP17.26■□□□□ 0.35
NDNF-201ENST00000379692 USP28Q96RU2 1077 aa17.26■□□□□ 0.35
NDNF-201ENST00000379692 CLSTN2Q9H4D0 955 aa17.26■□□□□ 0.35
NDNF-201ENST00000379692 INCENPQ9NQS7 918 aa17.26■□□□□ 0.35
NDNF-201ENST00000379692 NTRK3Q16288 839 aa17.26■□□□□ 0.35
NDNF-201ENST00000379692 BCL11BQ9C0K0 894 aaPredicted RBP17.26■□□□□ 0.35
NDNF-201ENST00000379692 FAM217BQ9NTX9 383 aaPredicted RBP17.26■□□□□ 0.35
NDNF-201ENST00000379692 DACT1Q9NYF0 836 aa17.26■□□□□ 0.35
NDNF-201ENST00000379692 IQSEC3Q9UPP2 1182 aaPredicted RBP17.26■□□□□ 0.35
NDNF-201ENST00000379692 KLRK1P26718 216 aa17.25■□□□□ 0.35
NDNF-201ENST00000379692 FOSBP53539 338 aa17.25■□□□□ 0.35
NDNF-201ENST00000379692 C8orf76Q96K31 380 aa17.25■□□□□ 0.35
NDNF-201ENST00000379692 CDC27P30260 824 aa17.25■□□□□ 0.35
NDNF-201ENST00000379692 METAP2P50579 478 aaKnown RBP eCLIP17.25■□□□□ 0.35
NDNF-201ENST00000379692 MIGA1Q8NAN2 632 aa17.25■□□□□ 0.35
NDNF-201ENST00000379692 MAGEB6P1A0A0J9YX57 407 aa17.24■□□□□ 0.35
NDNF-201ENST00000379692 PPFIA3O75145 1194 aa17.24■□□□□ 0.35
NDNF-201ENST00000379692 ADRA2BP18089 450 aa17.24■□□□□ 0.35
NDNF-201ENST00000379692 TDO2P48775 406 aa17.24■□□□□ 0.35
NDNF-201ENST00000379692 GUCY1B3Q02153 619 aa17.24■□□□□ 0.35
NDNF-201ENST00000379692 MAP3K11Q16584 847 aa17.24■□□□□ 0.35
NDNF-201ENST00000379692 TPRNQ4KMQ1 711 aa17.24■□□□□ 0.35
NDNF-201ENST00000379692 MFSD6Q6ZSS7 791 aa17.24■□□□□ 0.35
NDNF-201ENST00000379692 FTOQ9C0B1 505 aaKnown RBP eCLIP17.24■□□□□ 0.35
NDNF-201ENST00000379692 RTEL1Q9NZ71 1219 aa17.24■□□□□ 0.35
NDNF-201ENST00000379692 TRPC5Q9UL62 973 aaPredicted RBP17.24■□□□□ 0.35
NDNF-201ENST00000379692 BAZ2AQ9UIF9 1905 aaKnown RBP17.24■□□□□ 0.35
NDNF-201ENST00000379692 BRWD3Q6RI45 1802 aa17.24■□□□□ 0.35
NDNF-201ENST00000379692 CPLX1O14810 134 aa17.24■□□□□ 0.35
NDNF-201ENST00000379692 KDM4AO75164 1064 aa17.24■□□□□ 0.35
NDNF-201ENST00000379692 TMEM67Q5HYA8 995 aa17.24■□□□□ 0.35
NDNF-201ENST00000379692 TRAPPC3LQ5T215 181 aa17.24■□□□□ 0.35
NDNF-201ENST00000379692 RAB11FIP4Q86YS3 637 aa17.24■□□□□ 0.35
NDNF-201ENST00000379692 SEPT12Q8IYM1 358 aa17.24■□□□□ 0.35
NDNF-201ENST00000379692 LRRC4BQ9NT99 713 aa17.24■□□□□ 0.35
NDNF-201ENST00000379692 STK36Q9NRP7 1315 aa17.24■□□□□ 0.35
NDNF-201ENST00000379692 GOLGA6L4A6NEF3 574 aa17.23■□□□□ 0.35
NDNF-201ENST00000379692 NR1I2O75469 434 aa17.23■□□□□ 0.35
NDNF-201ENST00000379692 CDKL5O76039 1030 aa17.23■□□□□ 0.35
NDNF-201ENST00000379692 TMED8Q6PL24 325 aaPredicted RBP17.23■□□□□ 0.35
NDNF-201ENST00000379692 CERKQ8TCT0 537 aa17.23■□□□□ 0.35
NDNF-201ENST00000379692 ZBTB43O43298 467 aa17.23■□□□□ 0.35
NDNF-201ENST00000379692 PPARAQ07869 468 aa17.23■□□□□ 0.35
NDNF-201ENST00000379692 MEX3CQ5U5Q3 659 aaKnown RBP17.23■□□□□ 0.35
NDNF-201ENST00000379692 BRAPQ7Z569 592 aa17.23■□□□□ 0.35
NDNF-201ENST00000379692 BRIP1Q9BX63 1249 aa17.23■□□□□ 0.35
NDNF-201ENST00000379692 RAI14Q9P0K7 980 aa17.23■□□□□ 0.35
NDNF-201ENST00000379692 ABCF2Q9UG63 623 aa17.23■□□□□ 0.35
NDNF-201ENST00000379692 CCDC192P0DO97 292 aa17.22■□□□□ 0.35
NDNF-201ENST00000379692 RCAN1P53805 252 aa17.22■□□□□ 0.35
NDNF-201ENST00000379692 NFIXQ14938 502 aa17.22■□□□□ 0.35
NDNF-201ENST00000379692 FAM196AQ6ZSG2 479 aa17.22■□□□□ 0.35
NDNF-201ENST00000379692 RNF41Q9H4P4 317 aaPredicted RBP17.22■□□□□ 0.35
NDNF-201ENST00000379692 HSPA1LP34931 641 aa17.22■□□□□ 0.35
NDNF-201ENST00000379692 RFC4P35249 363 aa17.22■□□□□ 0.35
NDNF-201ENST00000379692 KIF23Q02241 960 aaPredicted RBP17.22■□□□□ 0.35
NDNF-201ENST00000379692 OTUD7BQ6GQQ9 843 aa17.22■□□□□ 0.35
NDNF-201ENST00000379692 ZSCAN30Q86W11 494 aa17.22■□□□□ 0.35
NDNF-201ENST00000379692 NSUN4Q96CB9 384 aaKnown RBP17.22■□□□□ 0.35
NDNF-201ENST00000379692 FGRP09769 529 aa17.22■□□□□ 0.35
NDNF-201ENST00000379692 VPS37DQ86XT2 251 aa17.22■□□□□ 0.35
NDNF-201ENST00000379692 BICD2Q8TD16 824 aa17.22■□□□□ 0.35
NDNF-201ENST00000379692 TNMDQ9H2S6 317 aa17.22■□□□□ 0.35
NDNF-201ENST00000379692 POLR3EQ9NVU0 708 aa17.22■□□□□ 0.35
NDNF-201ENST00000379692 RANBP6O60518 1105 aaKnown RBP17.21■□□□□ 0.35
NDNF-201ENST00000379692 HIBADHP31937 336 aaKnown RBP17.21■□□□□ 0.35
NDNF-201ENST00000379692 MRVI1Q9Y6F6 885 aa17.21■□□□□ 0.35
NDNF-201ENST00000379692 KIF28PB7ZC32 967 aa17.21■□□□□ 0.35
NDNF-201ENST00000379692 IFIT3O14879 490 aaKnown RBP17.21■□□□□ 0.35
NDNF-201ENST00000379692 CCDC24Q8N4L8 307 aa17.21■□□□□ 0.35
NDNF-201ENST00000379692 ENGASEQ8NFI3 743 aa17.21■□□□□ 0.35
NDNF-201ENST00000379692 SDR42E1Q8WUS8 393 aa17.21■□□□□ 0.35
NDNF-201ENST00000379692 IGSF3O75054 1194 aa17.2■□□□□ 0.34
NDNF-201ENST00000379692 TYRO3Q06418 890 aa17.2■□□□□ 0.34
NDNF-201ENST00000379692 SNW1Q13573 536 aaKnown RBP17.2■□□□□ 0.34
NDNF-201ENST00000379692 GRAPQ13588 217 aa17.2■□□□□ 0.34
NDNF-201ENST00000379692 MICU3Q86XE3 530 aa17.2■□□□□ 0.34
NDNF-201ENST00000379692 GRAPLQ8TC17 118 aaPredicted RBP17.2■□□□□ 0.34
NDNF-201ENST00000379692 GOLPH3LQ9H4A5 285 aa17.2■□□□□ 0.34
NDNF-201ENST00000379692 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms