RNA–Protein interactions for RNA: ENST00000379538.7

SNCAIP-203, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SNCAIP, Length 2,588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-203ENST00000379538 KCNB2Q92953 911 aa16.11■□□□□ 0.17
SNCAIP-203ENST00000379538 MRFAP1L1Q96HT8 127 aa16.11■□□□□ 0.17
SNCAIP-203ENST00000379538 ZNF652Q9Y2D9 606 aa16.11■□□□□ 0.17
SNCAIP-203ENST00000379538 ANKRD18BA2A2Z9 1011 aa16.1■□□□□ 0.17
SNCAIP-203ENST00000379538 EN1Q05925 392 aaPredicted RBP16.1■□□□□ 0.17
SNCAIP-203ENST00000379538 NFIXQ14938 502 aa16.1■□□□□ 0.17
SNCAIP-203ENST00000379538 METTL24Q5JXM2 366 aa16.1■□□□□ 0.17
SNCAIP-203ENST00000379538 CERS3Q8IU89 383 aa16.1■□□□□ 0.17
SNCAIP-203ENST00000379538 ZFP91Q96JP5 570 aaPredicted RBP16.1■□□□□ 0.17
SNCAIP-203ENST00000379538 PLA2G12BQ9BX93 195 aa16.1■□□□□ 0.17
SNCAIP-203ENST00000379538 TRIM34Q9BYJ4 488 aa16.1■□□□□ 0.17
SNCAIP-203ENST00000379538 TFCP2L1Q9NZI6 479 aa16.1■□□□□ 0.17
SNCAIP-203ENST00000379538 CDHR2Q9BYE9 1310 aa16.1■□□□□ 0.17
SNCAIP-203ENST00000379538 GOLGA8FQ08AF8 430 aa16.1■□□□□ 0.17
SNCAIP-203ENST00000379538 GOLGA8DPQ0D2H9 430 aa16.1■□□□□ 0.17
SNCAIP-203ENST00000379538 MSL1Q68DK7 614 aa16.1■□□□□ 0.17
SNCAIP-203ENST00000379538 ISM2Q6H9L7 571 aa16.1■□□□□ 0.17
SNCAIP-203ENST00000379538 CEP126Q9P2H0 1117 aa16.1■□□□□ 0.17
SNCAIP-203ENST00000379538 BIN1O00499 593 aa16.09■□□□□ 0.17
SNCAIP-203ENST00000379538 FANCGO15287 622 aa16.09■□□□□ 0.17
SNCAIP-203ENST00000379538 PNMA6AP0CW24 399 aaPredicted RBP16.09■□□□□ 0.17
SNCAIP-203ENST00000379538 HSP90B1P14625 803 aaKnown RBP16.09■□□□□ 0.17
SNCAIP-203ENST00000379538 CDC25BP30305 580 aa16.09■□□□□ 0.17
SNCAIP-203ENST00000379538 IL15P40933 162 aaPredicted RBP16.09■□□□□ 0.17
SNCAIP-203ENST00000379538 SCARF1Q14162 830 aa16.09■□□□□ 0.17
SNCAIP-203ENST00000379538 ARMCX5Q6P1M9 558 aa16.09■□□□□ 0.17
SNCAIP-203ENST00000379538 CCDC129Q6ZRS4 1044 aa16.09■□□□□ 0.17
SNCAIP-203ENST00000379538 PPP1R13BQ96KQ4 1090 aa16.09■□□□□ 0.17
SNCAIP-203ENST00000379538 TMX1Q9H3N1 280 aa16.09■□□□□ 0.17
SNCAIP-203ENST00000379538 RIPOR2Q9Y4F9 1068 aa16.09■□□□□ 0.17
SNCAIP-203ENST00000379538 USP42Q9H9J4 1324 aaKnown RBP16.09■□□□□ 0.17
SNCAIP-203ENST00000379538 H2AFXP16104 143 aaPredicted RBP16.09■□□□□ 0.17
SNCAIP-203ENST00000379538 CYP2C19P33261 490 aa16.09■□□□□ 0.17
SNCAIP-203ENST00000379538 GYS2P54840 703 aa16.09■□□□□ 0.17
SNCAIP-203ENST00000379538 ST5P78524 1137 aa16.09■□□□□ 0.17
SNCAIP-203ENST00000379538 SARM1Q6SZW1 724 aa16.09■□□□□ 0.17
SNCAIP-203ENST00000379538 USP28Q96RU2 1077 aa16.09■□□□□ 0.17
SNCAIP-203ENST00000379538 FSD1Q9BTV5 496 aa16.09■□□□□ 0.17
SNCAIP-203ENST00000379538 ADD1P35611 737 aaKnown RBP16.08■□□□□ 0.17
SNCAIP-203ENST00000379538 STX1AQ16623 288 aa16.08■□□□□ 0.17
SNCAIP-203ENST00000379538 CLEC4GQ6UXB4 293 aa16.08■□□□□ 0.17
SNCAIP-203ENST00000379538 DEFB132Q7Z7B7 95 aa16.08■□□□□ 0.17
SNCAIP-203ENST00000379538 CELF1Q92879 486 aaKnown RBP16.08■□□□□ 0.17
SNCAIP-203ENST00000379538 PDGFDQ9GZP0 370 aaPredicted RBP16.08■□□□□ 0.17
SNCAIP-203ENST00000379538 TTC41PQ6P2S7 1318 aa16.08■□□□□ 0.16
SNCAIP-203ENST00000379538 SMC2O95347 1197 aa16.08■□□□□ 0.16
SNCAIP-203ENST00000379538 EZH2Q15910 746 aaKnown RBP16.08■□□□□ 0.16
SNCAIP-203ENST00000379538 PARP10Q53GL7 1025 aa16.08■□□□□ 0.16
SNCAIP-203ENST00000379538 TMC6Q7Z403 805 aa16.08■□□□□ 0.16
SNCAIP-203ENST00000379538 FAM177A1Q8N128 213 aaPredicted RBP16.08■□□□□ 0.16
SNCAIP-203ENST00000379538 EVI5LQ96CN4 794 aa16.08■□□□□ 0.16
SNCAIP-203ENST00000379538 C4BP0C0L5 1744 aa16.07■□□□□ 0.16
SNCAIP-203ENST00000379538 GYS1P13807 737 aa16.07■□□□□ 0.16
SNCAIP-203ENST00000379538 PSMA5P28066 241 aa16.07■□□□□ 0.16
SNCAIP-203ENST00000379538 XAGE2Q96GT9 111 aa16.07■□□□□ 0.16
SNCAIP-203ENST00000379538 XPO4Q9C0E2 1151 aaKnown RBP16.07■□□□□ 0.16
SNCAIP-203ENST00000379538 TAOK2Q9UL54 1235 aa16.07■□□□□ 0.16
SNCAIP-203ENST00000379538 IQSEC3Q9UPP2 1182 aaPredicted RBP16.07■□□□□ 0.16
SNCAIP-203ENST00000379538 HMGB2P26583 209 aaKnown RBP16.07■□□□□ 0.16
SNCAIP-203ENST00000379538 FKBP4Q02790 459 aaKnown RBP eCLIP16.07■□□□□ 0.16
SNCAIP-203ENST00000379538 Q6ZUG5 572 aa16.07■□□□□ 0.16
SNCAIP-203ENST00000379538 IFNKQ9P0W0 207 aa16.07■□□□□ 0.16
SNCAIP-203ENST00000379538 ANKRD36CQ5JPF3 1778 aa16.07■□□□□ 0.16
SNCAIP-203ENST00000379538 TAF1LQ8IZX4 1826 aa16.06■□□□□ 0.16
SNCAIP-203ENST00000379538 A0A1B0GVL5 298 aa16.06■□□□□ 0.16
SNCAIP-203ENST00000379538 GOLIM4O00461 696 aa16.06■□□□□ 0.16
SNCAIP-203ENST00000379538 CCT2P78371 535 aaKnown RBP16.06■□□□□ 0.16
SNCAIP-203ENST00000379538 BMS1Q14692 1282 aaKnown RBP16.06■□□□□ 0.16
SNCAIP-203ENST00000379538 DPCR1Q3MIW9 517 aa16.06■□□□□ 0.16
SNCAIP-203ENST00000379538 HOMER1Q86YM7 354 aa16.06■□□□□ 0.16
SNCAIP-203ENST00000379538 MPHOSPH8Q99549 860 aa16.06■□□□□ 0.16
SNCAIP-203ENST00000379538 NCOA5Q9HCD5 579 aaKnown RBP16.06■□□□□ 0.16
SNCAIP-203ENST00000379538 CALCOCO1Q9P1Z2 691 aa16.06■□□□□ 0.16
SNCAIP-203ENST00000379538 DNAI1Q9UI46 699 aa16.06■□□□□ 0.16
SNCAIP-203ENST00000379538 TULP2O00295 520 aa16.06■□□□□ 0.16
SNCAIP-203ENST00000379538 SCRN1Q12765 414 aa16.06■□□□□ 0.16
SNCAIP-203ENST00000379538 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.06■□□□□ 0.16
SNCAIP-203ENST00000379538 ME1P48163 572 aa16.05■□□□□ 0.16
SNCAIP-203ENST00000379538 COL23A1Q86Y22 540 aaPredicted RBP16.05■□□□□ 0.16
SNCAIP-203ENST00000379538 FSIP1Q8NA03 581 aa16.05■□□□□ 0.16
SNCAIP-203ENST00000379538 CCDC34Q96HJ3 373 aa16.05■□□□□ 0.16
SNCAIP-203ENST00000379538 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.05■□□□□ 0.16
SNCAIP-203ENST00000379538 A0A0G2JLW4 131 aa16.05■□□□□ 0.16
SNCAIP-203ENST00000379538 RAD51AP2Q09MP3 1159 aa16.05■□□□□ 0.16
SNCAIP-203ENST00000379538 OTUD7BQ6GQQ9 843 aa16.05■□□□□ 0.16
SNCAIP-203ENST00000379538 GPATCH3Q96I76 525 aa16.05■□□□□ 0.16
SNCAIP-203ENST00000379538 L2HGDHQ9H9P8 463 aa16.05■□□□□ 0.16
SNCAIP-203ENST00000379538 RIC1Q4ADV7 1423 aa16.05■□□□□ 0.16
SNCAIP-203ENST00000379538 KINO60870 393 aaKnown RBP16.04■□□□□ 0.16
SNCAIP-203ENST00000379538 CCDC93Q567U6 631 aa16.04■□□□□ 0.16
SNCAIP-203ENST00000379538 SMARCE1Q969G3 411 aa16.04■□□□□ 0.16
SNCAIP-203ENST00000379538 NEMFO60524 1076 aa16.04■□□□□ 0.16
SNCAIP-203ENST00000379538 SASH3O75995 380 aa16.04■□□□□ 0.16
SNCAIP-203ENST00000379538 CCDC152Q4G0S7 254 aa16.04■□□□□ 0.16
SNCAIP-203ENST00000379538 CHST3Q7LGC8 479 aa16.04■□□□□ 0.16
SNCAIP-203ENST00000379538 TNS1Q9HBL0 1735 aaKnown RBP16.04■□□□□ 0.16
SNCAIP-203ENST00000379538 KLHL34Q8N239 644 aa16.03■□□□□ 0.16
SNCAIP-203ENST00000379538 VGLL2Q8N8G2 317 aa16.03■□□□□ 0.16
SNCAIP-203ENST00000379538 IPO4Q8TEX9 1081 aaKnown RBP16.03■□□□□ 0.16
SNCAIP-203ENST00000379538 SDF4Q9BRK5 362 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms