RNA–Protein interactions for RNA: ENST00000379516.6

SNX2-201, Transcript of sorting nexin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX2, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2-201ENST00000379516 ZNF384Q8TF68 577 aa17.68■□□□□ 0.42
SNX2-201ENST00000379516 RIOK1Q9BRS2 568 aaKnown RBP17.68■□□□□ 0.42
SNX2-201ENST00000379516 DHX16O60231 1041 aaKnown RBP17.68■□□□□ 0.42
SNX2-201ENST00000379516 FOSBP53539 338 aa17.68■□□□□ 0.42
SNX2-201ENST00000379516 KRT85P78386 507 aa17.68■□□□□ 0.42
SNX2-201ENST00000379516 MECOMQ03112 1051 aa17.68■□□□□ 0.42
SNX2-201ENST00000379516 ZNF827Q17R98 1081 aa17.68■□□□□ 0.42
SNX2-201ENST00000379516 NSUN4Q96CB9 384 aaKnown RBP17.68■□□□□ 0.42
SNX2-201ENST00000379516 TMEM87BQ96K49 555 aa17.68■□□□□ 0.42
SNX2-201ENST00000379516 CNNM2Q9H8M5 875 aa17.68■□□□□ 0.42
SNX2-201ENST00000379516 HPS5Q9UPZ3 1129 aa17.68■□□□□ 0.42
SNX2-201ENST00000379516 JAG2Q9Y219 1238 aa17.68■□□□□ 0.42
SNX2-201ENST00000379516 SALL1Q9NSC2 1324 aa17.67■□□□□ 0.42
SNX2-201ENST00000379516 SH2B2O14492 632 aaPredicted RBP17.67■□□□□ 0.42
SNX2-201ENST00000379516 UBE2HP62256 183 aa17.67■□□□□ 0.42
SNX2-201ENST00000379516 STK11IPQ8N1F8 1099 aa17.67■□□□□ 0.42
SNX2-201ENST00000379516 TOMM22Q9NS69 142 aa17.67■□□□□ 0.42
SNX2-201ENST00000379516 TACC3Q9Y6A5 838 aa17.67■□□□□ 0.42
SNX2-201ENST00000379516 KDM4AO75164 1064 aa17.66■□□□□ 0.42
SNX2-201ENST00000379516 RRP12Q5JTH9 1297 aaKnown RBP17.66■□□□□ 0.42
SNX2-201ENST00000379516 STAG1Q8WVM7 1258 aa17.66■□□□□ 0.42
SNX2-201ENST00000379516 KRT23Q9C075 422 aa17.66■□□□□ 0.42
SNX2-201ENST00000379516 ZSWIM5Q9P217 1185 aa17.66■□□□□ 0.42
SNX2-201ENST00000379516 RXRBP28702 533 aa17.66■□□□□ 0.42
SNX2-201ENST00000379516 PRDX5P30044 214 aa17.66■□□□□ 0.42
SNX2-201ENST00000379516 GPSM2P81274 684 aa17.66■□□□□ 0.42
SNX2-201ENST00000379516 IGDCC4Q8TDY8 1250 aa17.66■□□□□ 0.42
SNX2-201ENST00000379516 SYAP1Q96A49 352 aaPredicted RBP17.66■□□□□ 0.42
SNX2-201ENST00000379516 MINDY4BA8MYZ0 360 aa17.65■□□□□ 0.42
SNX2-201ENST00000379516 CPLX1O14810 134 aa17.65■□□□□ 0.42
SNX2-201ENST00000379516 PPARAQ07869 468 aa17.65■□□□□ 0.42
SNX2-201ENST00000379516 RESTQ13127 1097 aa17.65■□□□□ 0.42
SNX2-201ENST00000379516 TMEM67Q5HYA8 995 aa17.65■□□□□ 0.42
SNX2-201ENST00000379516 GPR101Q96P66 508 aaPredicted RBP17.65■□□□□ 0.42
SNX2-201ENST00000379516 ZSCAN16Q9H4T2 348 aaPredicted RBP17.65■□□□□ 0.42
SNX2-201ENST00000379516 CACNA1SQ13698 1873 aa17.65■□□□□ 0.42
SNX2-201ENST00000379516 TCHHQ07283 1943 aa17.65■□□□□ 0.42
SNX2-201ENST00000379516 SYCE3A1L190 88 aa17.65■□□□□ 0.42
SNX2-201ENST00000379516 NFXL1Q6ZNB6 911 aa17.65■□□□□ 0.42
SNX2-201ENST00000379516 AKT1S1Q96B36 256 aa17.65■□□□□ 0.42
SNX2-201ENST00000379516 PANK2Q9BZ23 570 aa17.65■□□□□ 0.42
SNX2-201ENST00000379516 RNF41Q9H4P4 317 aaPredicted RBP17.65■□□□□ 0.42
SNX2-201ENST00000379516 IFIT3O14879 490 aaKnown RBP17.64■□□□□ 0.41
SNX2-201ENST00000379516 BBOX1O75936 387 aa17.64■□□□□ 0.41
SNX2-201ENST00000379516 FDPSP14324 419 aaKnown RBP17.64■□□□□ 0.41
SNX2-201ENST00000379516 METAP2P50579 478 aaKnown RBP eCLIP17.64■□□□□ 0.41
SNX2-201ENST00000379516 ZNF804AQ7Z570 1209 aa17.64■□□□□ 0.41
SNX2-201ENST00000379516 COL23A1Q86Y22 540 aaPredicted RBP17.64■□□□□ 0.41
SNX2-201ENST00000379516 LY9Q9HBG7 655 aa17.64■□□□□ 0.41
SNX2-201ENST00000379516 SENP2Q9HC62 589 aa17.64■□□□□ 0.41
SNX2-201ENST00000379516 UFL1O94874 794 aa17.63■□□□□ 0.41
SNX2-201ENST00000379516 SPTY2D1Q68D10 685 aaPredicted RBP17.63■□□□□ 0.41
SNX2-201ENST00000379516 NLGN1Q8N2Q7 840 aa17.63■□□□□ 0.41
SNX2-201ENST00000379516 AATFQ9NY61 560 aaKnown RBP eCLIP17.63■□□□□ 0.41
SNX2-201ENST00000379516 TFIP11Q9UBB9 837 aaKnown RBP17.63■□□□□ 0.41
SNX2-201ENST00000379516 ZBTB22O15209 634 aa17.63■□□□□ 0.41
SNX2-201ENST00000379516 HOXA10P31260 410 aaPredicted RBP17.63■□□□□ 0.41
SNX2-201ENST00000379516 APOA5Q6Q788 366 aa17.63■□□□□ 0.41
SNX2-201ENST00000379516 TTC6Q86TZ1 520 aa17.63■□□□□ 0.41
SNX2-201ENST00000379516 TDRD7Q8NHU6 1098 aaKnown RBP17.63■□□□□ 0.41
SNX2-201ENST00000379516 WDR66Q8TBY9 1149 aa17.63■□□□□ 0.41
SNX2-201ENST00000379516 BRIP1Q9BX63 1249 aa17.63■□□□□ 0.41
SNX2-201ENST00000379516 GGA1Q9UJY5 639 aa17.63■□□□□ 0.41
SNX2-201ENST00000379516 RXRAP19793 462 aa17.62■□□□□ 0.41
SNX2-201ENST00000379516 ATP2B4P23634 1241 aa17.62■□□□□ 0.41
SNX2-201ENST00000379516 LIFRP42702 1097 aa17.62■□□□□ 0.41
SNX2-201ENST00000379516 GUCY1B3Q02153 619 aa17.62■□□□□ 0.41
SNX2-201ENST00000379516 DZIP1Q86YF9 867 aaKnown RBP17.62■□□□□ 0.41
SNX2-201ENST00000379516 CRAMP1Q96RY5 1269 aa17.62■□□□□ 0.41
SNX2-201ENST00000379516 SCAND2PQ9GZW5 306 aaPredicted RBP17.62■□□□□ 0.41
SNX2-201ENST00000379516 ORC3Q9UBD5 711 aaPredicted RBP17.62■□□□□ 0.41
SNX2-201ENST00000379516 ANAPC4Q9UJX5 808 aa17.62■□□□□ 0.41
SNX2-201ENST00000379516 TIAM2Q8IVF5 1701 aa17.62■□□□□ 0.41
SNX2-201ENST00000379516 KLRG2A4D1S0 409 aaPredicted RBP17.62■□□□□ 0.41
SNX2-201ENST00000379516 ZBTB43O43298 467 aa17.62■□□□□ 0.41
SNX2-201ENST00000379516 ADD1P35611 737 aaKnown RBP17.62■□□□□ 0.41
SNX2-201ENST00000379516 LRSAM1Q6UWE0 723 aa17.62■□□□□ 0.41
SNX2-201ENST00000379516 C15orf52Q6ZUT6 534 aaKnown RBP17.62■□□□□ 0.41
SNX2-201ENST00000379516 SGMS1Q86VZ5 419 aa17.62■□□□□ 0.41
SNX2-201ENST00000379516 MICU3Q86XE3 530 aa17.62■□□□□ 0.41
SNX2-201ENST00000379516 SPATA32Q96LK8 384 aa17.62■□□□□ 0.41
SNX2-201ENST00000379516 ZKSCAN3Q9BRR0 538 aa17.62■□□□□ 0.41
SNX2-201ENST00000379516 CCDC69A6NI79 296 aa17.61■□□□□ 0.41
SNX2-201ENST00000379516 LDHBP07195 334 aaKnown RBP17.61■□□□□ 0.41
SNX2-201ENST00000379516 SART3Q15020 963 aaKnown RBP17.61■□□□□ 0.41
SNX2-201ENST00000379516 GIMAP6Q6P9H5 292 aa17.61■□□□□ 0.41
SNX2-201ENST00000379516 CRNKL1Q9BZJ0 848 aaKnown RBP17.61■□□□□ 0.41
SNX2-201ENST00000379516 CYP2D7A0A087X1C5 515 aa17.6■□□□□ 0.41
SNX2-201ENST00000379516 SMIM22K7EJ46 135 aa17.6■□□□□ 0.41
SNX2-201ENST00000379516 TMED8Q6PL24 325 aaPredicted RBP17.6■□□□□ 0.41
SNX2-201ENST00000379516 CCDC144CPQ8IYA2 1237 aa17.6■□□□□ 0.41
SNX2-201ENST00000379516 MYL10Q9BUA6 226 aa17.6■□□□□ 0.41
SNX2-201ENST00000379516 SLC12A7Q9Y666 1083 aa17.6■□□□□ 0.41
SNX2-201ENST00000379516 ELP1O95163 1332 aa17.6■□□□□ 0.41
SNX2-201ENST00000379516 MYH13Q9UKX3 1938 aa17.6■□□□□ 0.41
SNX2-201ENST00000379516 ERICH2A1L162 156 aa17.6■□□□□ 0.41
SNX2-201ENST00000379516 FLAD1Q8NFF5 587 aa17.6■□□□□ 0.41
SNX2-201ENST00000379516 LEO1Q8WVC0 666 aaPredicted RBP17.6■□□□□ 0.41
SNX2-201ENST00000379516 C8orf76Q96K31 380 aa17.6■□□□□ 0.41
SNX2-201ENST00000379516 GOLGA8AA7E2F4 631 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms