RNA–Protein interactions for RNA: ENST00000379361.4

PTCHD1-201, Transcript of patched domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD1, Length 13,714 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1-201ENST00000379361 ALG1Q9BT22 464 aa12.52□□□□□ -0.41
PTCHD1-201ENST00000379361 ITSN2Q9NZM3 1697 aa12.52□□□□□ -0.41
PTCHD1-201ENST00000379361 PPP1R2P41236 205 aa12.52□□□□□ -0.41
PTCHD1-201ENST00000379361 DCUN1D2Q6PH85 259 aa12.52□□□□□ -0.41
PTCHD1-201ENST00000379361 UBE3BQ7Z3V4 1068 aa12.52□□□□□ -0.41
PTCHD1-201ENST00000379361 RTEL1Q9NZ71 1219 aa12.52□□□□□ -0.41
PTCHD1-201ENST00000379361 MYH6P13533 1939 aa12.52□□□□□ -0.41
PTCHD1-201ENST00000379361 PTGS1P23219 599 aa12.52□□□□□ -0.41
PTCHD1-201ENST00000379361 WHAMMQ8TF30 809 aa12.52□□□□□ -0.41
PTCHD1-201ENST00000379361 RSPH14Q9UHP6 348 aa12.52□□□□□ -0.41
PTCHD1-201ENST00000379361 ARFGAP2Q8N6H7 521 aa12.52□□□□□ -0.41
PTCHD1-201ENST00000379361 PSMD6Q15008 389 aa12.51□□□□□ -0.41
PTCHD1-201ENST00000379361 UBLCP1Q8WVY7 318 aaPredicted RBP12.51□□□□□ -0.41
PTCHD1-201ENST00000379361 GTF3C6Q969F1 213 aa12.51□□□□□ -0.41
PTCHD1-201ENST00000379361 SP4Q02446 784 aa12.51□□□□□ -0.41
PTCHD1-201ENST00000379361 SEPT8Q92599 483 aa12.51□□□□□ -0.41
PTCHD1-201ENST00000379361 HAUS1Q96CS2 278 aa12.51□□□□□ -0.41
PTCHD1-201ENST00000379361 RBM17Q96I25 401 aaKnown RBP12.51□□□□□ -0.41
PTCHD1-201ENST00000379361 PRIMPOLQ96LW4 560 aa12.51□□□□□ -0.41
PTCHD1-201ENST00000379361 GJA3Q9Y6H8 435 aa12.51□□□□□ -0.41
PTCHD1-201ENST00000379361 CASKIN1Q8WXD9 1431 aa12.51□□□□□ -0.41
PTCHD1-201ENST00000379361 TRIM75PA6NK02 468 aa12.51□□□□□ -0.41
PTCHD1-201ENST00000379361 S100BP04271 92 aaPredicted RBP12.51□□□□□ -0.41
PTCHD1-201ENST00000379361 NUDT16Q96DE0 195 aaKnown RBP12.51□□□□□ -0.41
PTCHD1-201ENST00000379361 HSPA8P11142 646 aaKnown RBP12.51□□□□□ -0.41
PTCHD1-201ENST00000379361 GIGYF1O75420 1035 aaPredicted RBP12.51□□□□□ -0.41
PTCHD1-201ENST00000379361 PDE6AP16499 860 aa12.51□□□□□ -0.41
PTCHD1-201ENST00000379361 ZNF131P52739 623 aa12.51□□□□□ -0.41
PTCHD1-201ENST00000379361 PPP2R5CQ13362 524 aa12.51□□□□□ -0.41
PTCHD1-201ENST00000379361 IFNL2Q8IZJ0 200 aa12.51□□□□□ -0.41
PTCHD1-201ENST00000379361 TRIM56Q9BRZ2 755 aaKnown RBP12.51□□□□□ -0.41
PTCHD1-201ENST00000379361 CROCCP2Q86T23 111 aa12.5□□□□□ -0.41
PTCHD1-201ENST00000379361 SYCE1Q8N0S2 351 aa12.5□□□□□ -0.41
PTCHD1-201ENST00000379361 TFCP2L1Q9NZI6 479 aa12.5□□□□□ -0.41
PTCHD1-201ENST00000379361 TSPOAP1O95153 1857 aa12.5□□□□□ -0.41
PTCHD1-201ENST00000379361 GRIN2BQ13224 1484 aa12.5□□□□□ -0.41
PTCHD1-201ENST00000379361 PRG4Q92954 1404 aaPredicted RBP12.5□□□□□ -0.41
PTCHD1-201ENST00000379361 SMARCA5O60264 1052 aaPredicted RBP12.5□□□□□ -0.41
PTCHD1-201ENST00000379361 TNFAIP3P21580 790 aa12.5□□□□□ -0.41
PTCHD1-201ENST00000379361 CADPS2Q86UW7 1296 aa12.5□□□□□ -0.41
PTCHD1-201ENST00000379361 FAM76AQ8TAV0 307 aa12.5□□□□□ -0.41
PTCHD1-201ENST00000379361 PYGLP06737 847 aa12.5□□□□□ -0.41
PTCHD1-201ENST00000379361 PALM2Q8IXS6 379 aa12.5□□□□□ -0.41
PTCHD1-201ENST00000379361 FAM193BQ96PV7 902 aaPredicted RBP12.5□□□□□ -0.41
PTCHD1-201ENST00000379361 KIAA1107Q9UPP5 1409 aa12.5□□□□□ -0.41
PTCHD1-201ENST00000379361 SYT1P21579 422 aa12.5□□□□□ -0.41
PTCHD1-201ENST00000379361 XPAP23025 273 aaPredicted RBP12.5□□□□□ -0.41
PTCHD1-201ENST00000379361 SDCCAG3Q96C92 435 aa12.5□□□□□ -0.41
PTCHD1-201ENST00000379361 PRPF6O94906 941 aaKnown RBP12.5□□□□□ -0.41
PTCHD1-201ENST00000379361 SH3BGRP55822 239 aaPredicted RBP12.5□□□□□ -0.41
PTCHD1-201ENST00000379361 RAPGEF1Q13905 1077 aa12.5□□□□□ -0.41
PTCHD1-201ENST00000379361 ELMSAN1Q6PJG2 1045 aa12.5□□□□□ -0.41
PTCHD1-201ENST00000379361 PNMA2Q9UL42 364 aa12.5□□□□□ -0.41
PTCHD1-201ENST00000379361 ZNF449Q6P9G9 518 aa12.5□□□□□ -0.41
PTCHD1-201ENST00000379361 SV2BQ7L1I2 683 aa12.5□□□□□ -0.41
PTCHD1-201ENST00000379361 ATF7P17544 494 aaPredicted RBP12.5□□□□□ -0.41
PTCHD1-201ENST00000379361 IRX5P78411 483 aaPredicted RBP12.49□□□□□ -0.41
PTCHD1-201ENST00000379361 CNNM4Q6P4Q7 775 aa12.49□□□□□ -0.41
PTCHD1-201ENST00000379361 MAGEB6Q8N7X4 407 aa12.49□□□□□ -0.41
PTCHD1-201ENST00000379361 COG7P83436 770 aa12.49□□□□□ -0.41
PTCHD1-201ENST00000379361 TRIM14Q14142 442 aa12.49□□□□□ -0.41
PTCHD1-201ENST00000379361 ECM2O94769 699 aaPredicted RBP12.49□□□□□ -0.41
PTCHD1-201ENST00000379361 GINS2Q9Y248 185 aa12.49□□□□□ -0.41
PTCHD1-201ENST00000379361 KRT10P13645 584 aa12.49□□□□□ -0.41
PTCHD1-201ENST00000379361 KLF18A0A0U1RQI7 1052 aa12.49□□□□□ -0.41
PTCHD1-201ENST00000379361 PCK1P35558 622 aa12.49□□□□□ -0.41
PTCHD1-201ENST00000379361 TMTC4Q5T4D3 741 aa12.49□□□□□ -0.41
PTCHD1-201ENST00000379361 A6NNZ2 444 aa12.49□□□□□ -0.41
PTCHD1-201ENST00000379361 TUBB8Q3ZCM7 444 aa12.49□□□□□ -0.41
PTCHD1-201ENST00000379361 ORC6Q9Y5N6 252 aa12.49□□□□□ -0.41
PTCHD1-201ENST00000379361 MAP3K7O43318 606 aa12.49□□□□□ -0.41
PTCHD1-201ENST00000379361 LDHBP07195 334 aaKnown RBP12.49□□□□□ -0.41
PTCHD1-201ENST00000379361 PPP2R5DQ14738 602 aa12.49□□□□□ -0.41
PTCHD1-201ENST00000379361 PDE6BP35913 854 aa12.49□□□□□ -0.41
PTCHD1-201ENST00000379361 RAB3GAP1Q15042 981 aa12.49□□□□□ -0.41
PTCHD1-201ENST00000379361 PRPF38AQ8NAV1 312 aaKnown RBP12.49□□□□□ -0.41
PTCHD1-201ENST00000379361 ZBTB3Q9H5J0 574 aa12.49□□□□□ -0.41
PTCHD1-201ENST00000379361 DNAJC13O75165 2243 aa12.49□□□□□ -0.41
PTCHD1-201ENST00000379361 TRIML1Q8N9V2 468 aa12.48□□□□□ -0.41
PTCHD1-201ENST00000379361 P3H4Q92791 437 aa12.48□□□□□ -0.41
PTCHD1-201ENST00000379361 CDCA7LQ96GN5 454 aa12.48□□□□□ -0.41
PTCHD1-201ENST00000379361 CCDC68Q9H2F9 335 aa12.48□□□□□ -0.41
PTCHD1-201ENST00000379361 DHX58Q96C10 678 aa12.48□□□□□ -0.41
PTCHD1-201ENST00000379361 PRKAG2Q9UGJ0 569 aa12.48□□□□□ -0.41
PTCHD1-201ENST00000379361 MAP3K21Q5TCX8 1036 aa12.48□□□□□ -0.41
PTCHD1-201ENST00000379361 PARD3BQ8TEW8 1205 aa12.48□□□□□ -0.41
PTCHD1-201ENST00000379361 TSPYL2Q9H2G4 693 aaPredicted RBP12.48□□□□□ -0.41
PTCHD1-201ENST00000379361 CCDC169A6NNP5 214 aa12.48□□□□□ -0.41
PTCHD1-201ENST00000379361 C4orf50Q6ZRC1 276 aa12.48□□□□□ -0.41
PTCHD1-201ENST00000379361 PDCD7Q8N8D1 485 aaKnown RBP12.48□□□□□ -0.41
PTCHD1-201ENST00000379361 C8orf37Q96NL8 207 aa12.48□□□□□ -0.41
PTCHD1-201ENST00000379361 MCM9Q9NXL9 1143 aa12.48□□□□□ -0.41
PTCHD1-201ENST00000379361 RTTNQ86VV8 2226 aa12.48□□□□□ -0.41
PTCHD1-201ENST00000379361 MCM7P33993 719 aa12.48□□□□□ -0.41
PTCHD1-201ENST00000379361 IRX3P78415 501 aaPredicted RBP12.48□□□□□ -0.41
PTCHD1-201ENST00000379361 DHX29Q7Z478 1369 aaKnown RBP12.48□□□□□ -0.41
PTCHD1-201ENST00000379361 DTHD1Q6ZMT9 781 aa12.48□□□□□ -0.41
PTCHD1-201ENST00000379361 PPFIA1Q13136 1202 aa12.48□□□□□ -0.41
PTCHD1-201ENST00000379361 PLCD1P51178 756 aa12.48□□□□□ -0.41
PTCHD1-201ENST00000379361 FLIIQ13045 1269 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms