RNA–Protein interactions for RNA: ENST00000379241.7

VIT-201, Transcript of vitrin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VIT, Length 2,525 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIT-201ENST00000379241 NECAB1Q8N987 351 aa12.12□□□□□ -0.47
VIT-201ENST00000379241 IQSEC3Q9UPP2 1182 aaPredicted RBP12.12□□□□□ -0.47
VIT-201ENST00000379241 TNRC6CQ9HCJ0 1690 aaKnown RBP12.12□□□□□ -0.47
VIT-201ENST00000379241 EP400Q96L91 3159 aa12.11□□□□□ -0.47
VIT-201ENST00000379241 VPS37DQ86XT2 251 aa12.11□□□□□ -0.47
VIT-201ENST00000379241 AIDAQ96BJ3 306 aa12.11□□□□□ -0.47
VIT-201ENST00000379241 WDR33Q9C0J8 1336 aaKnown RBP12.11□□□□□ -0.47
VIT-201ENST00000379241 A0A1B0GUL6 1792 aa12.11□□□□□ -0.47
VIT-201ENST00000379241 SERPINB2P05120 415 aa12.11□□□□□ -0.47
VIT-201ENST00000379241 MCTP1Q6DN14 999 aa12.11□□□□□ -0.47
VIT-201ENST00000379241 FAM84BQ96KN1 310 aaPredicted RBP12.11□□□□□ -0.47
VIT-201ENST00000379241 LRP2BPQ9P2M1 347 aa12.11□□□□□ -0.47
VIT-201ENST00000379241 GOLGA6CA6NDK9 693 aa12.1□□□□□ -0.47
VIT-201ENST00000379241 GOLGA6BA6NDN3 693 aa12.1□□□□□ -0.47
VIT-201ENST00000379241 PLSCR1O15162 318 aa12.1□□□□□ -0.47
VIT-201ENST00000379241 NRDCO43847 1150 aa12.1□□□□□ -0.47
VIT-201ENST00000379241 GOLGA6DP0CG33 693 aa12.1□□□□□ -0.47
VIT-201ENST00000379241 RXRBP28702 533 aa12.1□□□□□ -0.47
VIT-201ENST00000379241 GJB2P29033 226 aa12.1□□□□□ -0.47
VIT-201ENST00000379241 HAND2P61296 217 aa12.1□□□□□ -0.47
VIT-201ENST00000379241 GRAPQ13588 217 aa12.1□□□□□ -0.47
VIT-201ENST00000379241 SKOR2Q2VWA4 1001 aaPredicted RBP12.1□□□□□ -0.47
VIT-201ENST00000379241 GRAPLQ8TC17 118 aaPredicted RBP12.1□□□□□ -0.47
VIT-201ENST00000379241 STRBPQ96SI9 672 aaKnown RBP12.1□□□□□ -0.47
VIT-201ENST00000379241 GOLGA6AQ9NYA3 693 aa12.1□□□□□ -0.47
VIT-201ENST00000379241 MRVI1Q9Y6F6 885 aa12.1□□□□□ -0.47
VIT-201ENST00000379241 ZNF213O14771 459 aa12.1□□□□□ -0.47
VIT-201ENST00000379241 APBA3O96018 575 aa12.1□□□□□ -0.47
VIT-201ENST00000379241 ST5P78524 1137 aa12.1□□□□□ -0.47
VIT-201ENST00000379241 EXOSC10Q01780 885 aaKnown RBP12.1□□□□□ -0.47
VIT-201ENST00000379241 SDR16C5Q8N3Y7 309 aa12.1□□□□□ -0.47
VIT-201ENST00000379241 BRF1Q92994 677 aa12.1□□□□□ -0.47
VIT-201ENST00000379241 LRRC2Q9BYS8 371 aa12.1□□□□□ -0.47
VIT-201ENST00000379241 MYO5AQ9Y4I1 1855 aaKnown RBP12.1□□□□□ -0.47
VIT-201ENST00000379241 DOCK2Q92608 1830 aa12.1□□□□□ -0.47
VIT-201ENST00000379241 SYT1P21579 422 aa12.09□□□□□ -0.47
VIT-201ENST00000379241 APBB1IPQ7Z5R6 666 aaPredicted RBP12.09□□□□□ -0.47
VIT-201ENST00000379241 FBXO33Q7Z6M2 555 aa12.09□□□□□ -0.47
VIT-201ENST00000379241 DENND2AQ9ULE3 1009 aa12.09□□□□□ -0.47
VIT-201ENST00000379241 STX6O43752 255 aa12.09□□□□□ -0.47
VIT-201ENST00000379241 MBD4O95243 580 aa12.09□□□□□ -0.47
VIT-201ENST00000379241 KLRK1P26718 216 aa12.09□□□□□ -0.47
VIT-201ENST00000379241 STK3Q13188 491 aa12.09□□□□□ -0.47
VIT-201ENST00000379241 RPGRQ92834 1020 aaKnown RBP12.09□□□□□ -0.47
VIT-201ENST00000379241 AGXT2Q9BYV1 514 aa12.09□□□□□ -0.47
VIT-201ENST00000379241 TFCP2L1Q9NZI6 479 aa12.09□□□□□ -0.47
VIT-201ENST00000379241 ABCF2Q9UG63 623 aa12.09□□□□□ -0.47
VIT-201ENST00000379241 RPS6KL1Q9Y6S9 549 aa12.09□□□□□ -0.47
VIT-201ENST00000379241 COL1A1P02452 1464 aaPredicted RBP12.09□□□□□ -0.47
VIT-201ENST00000379241 SEMA3EO15041 775 aa12.08□□□□□ -0.48
VIT-201ENST00000379241 DHX16O60231 1041 aaKnown RBP12.08□□□□□ -0.48
VIT-201ENST00000379241 HIBADHP31937 336 aaKnown RBP12.08□□□□□ -0.48
VIT-201ENST00000379241 DDR1Q08345 913 aa12.08□□□□□ -0.48
VIT-201ENST00000379241 ZNF827Q17R98 1081 aa12.08□□□□□ -0.48
VIT-201ENST00000379241 CRY2Q49AN0 593 aa12.08□□□□□ -0.48
VIT-201ENST00000379241 GTF3C6Q969F1 213 aa12.08□□□□□ -0.48
VIT-201ENST00000379241 CALR3Q96L12 384 aaKnown RBP12.08□□□□□ -0.48
VIT-201ENST00000379241 ARMT1Q9H993 441 aa12.08□□□□□ -0.48
VIT-201ENST00000379241 POLRMTO00411 1230 aaKnown RBP12.07□□□□□ -0.48
VIT-201ENST00000379241 DTNBO60941 627 aa12.07□□□□□ -0.48
VIT-201ENST00000379241 ZSCAN22P10073 491 aaPredicted RBP12.07□□□□□ -0.48
VIT-201ENST00000379241 FOXD4Q12950 439 aaPredicted RBP12.07□□□□□ -0.48
VIT-201ENST00000379241 ALX1Q15699 326 aa12.07□□□□□ -0.48
VIT-201ENST00000379241 NCOA7Q8NI08 942 aa12.07□□□□□ -0.48
VIT-201ENST00000379241 GZF1Q9H116 711 aaPredicted RBP12.07□□□□□ -0.48
VIT-201ENST00000379241 ZMYM6O95789 1325 aa12.07□□□□□ -0.48
VIT-201ENST00000379241 PNPLA7Q6ZV29 1317 aa12.07□□□□□ -0.48
VIT-201ENST00000379241 GNAT2P19087 354 aa12.07□□□□□ -0.48
VIT-201ENST00000379241 CYP7A1P22680 504 aa12.07□□□□□ -0.48
VIT-201ENST00000379241 CHST3Q7LGC8 479 aa12.07□□□□□ -0.48
VIT-201ENST00000379241 RALYLQ86SE5 291 aaKnown RBP12.07□□□□□ -0.48
VIT-201ENST00000379241 ATL2Q8NHH9 583 aa12.07□□□□□ -0.48
VIT-201ENST00000379241 AKT1S1Q96B36 256 aa12.07□□□□□ -0.48
VIT-201ENST00000379241 CHAMP1Q96JM3 812 aa12.07□□□□□ -0.48
VIT-201ENST00000379241 LMBRD1Q9NUN5 540 aa12.07□□□□□ -0.48
VIT-201ENST00000379241 ANKIB1Q9P2G1 1089 aa12.07□□□□□ -0.48
VIT-201ENST00000379241 LAMA4Q16363 1823 aa12.06□□□□□ -0.48
VIT-201ENST00000379241 MCM5P33992 734 aa12.06□□□□□ -0.48
VIT-201ENST00000379241 MB21D2Q8IYB1 491 aaPredicted RBP12.06□□□□□ -0.48
VIT-201ENST00000379241 IFNL3Q8IZI9 196 aa12.06□□□□□ -0.48
VIT-201ENST00000379241 LCORLQ8N3X6 602 aa12.06□□□□□ -0.48
VIT-201ENST00000379241 FBXL16Q8N461 479 aa12.06□□□□□ -0.48
VIT-201ENST00000379241 LEMD3Q9Y2U8 911 aa12.06□□□□□ -0.48
VIT-201ENST00000379241 PDS5AQ29RF7 1337 aaKnown RBP12.06□□□□□ -0.48
VIT-201ENST00000379241 APOBRQ0VD83 1088 aa12.06□□□□□ -0.48
VIT-201ENST00000379241 TRDNQ13061 729 aa12.06□□□□□ -0.48
VIT-201ENST00000379241 SETDB1Q15047 1291 aa12.06□□□□□ -0.48
VIT-201ENST00000379241 MIGA1Q8NAN2 632 aa12.06□□□□□ -0.48
VIT-201ENST00000379241 UPF1Q92900 1129 aaKnown RBP eCLIP12.06□□□□□ -0.48
VIT-201ENST00000379241 RBM17Q96I25 401 aaKnown RBP12.06□□□□□ -0.48
VIT-201ENST00000379241 NBPF3Q9H094 633 aa12.06□□□□□ -0.48
VIT-201ENST00000379241 NAPBQ9H115 298 aa12.06□□□□□ -0.48
VIT-201ENST00000379241 EPB41L4AQ9HCS5 686 aaPredicted RBP12.06□□□□□ -0.48
VIT-201ENST00000379241 DDX49Q9Y6V7 483 aaKnown RBP12.06□□□□□ -0.48
VIT-201ENST00000379241 XDHP47989 1333 aa12.06□□□□□ -0.48
VIT-201ENST00000379241 IRS2Q9Y4H2 1338 aa12.06□□□□□ -0.48
VIT-201ENST00000379241 GSG1L2A8MUP6 293 aa12.05□□□□□ -0.48
VIT-201ENST00000379241 PFKFB2O60825 505 aa12.05□□□□□ -0.48
VIT-201ENST00000379241 PRPF40AO75400 957 aaKnown RBP12.05□□□□□ -0.48
VIT-201ENST00000379241 CCDC172P0C7W6 258 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms