RNA–Protein interactions for RNA: ENST00000379053.4

LINC00654-201, long intergenic non-protein coding RNA 654, humanhuman

TSL 1 (best) BASIC

Gene LINC00654, Length 6,113 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00654-201ENST00000379053 TBC1D22AQ8WUA7 517 aa12.32□□□□□ -0.44
LINC00654-201ENST00000379053 ASXL1Q8IXJ9 1541 aa12.32□□□□□ -0.44
LINC00654-201ENST00000379053 DDX39AO00148 427 aaKnown RBP12.32□□□□□ -0.44
LINC00654-201ENST00000379053 CEP112Q8N8E3 955 aa12.32□□□□□ -0.44
LINC00654-201ENST00000379053 ZNF594Q96JF6 807 aaPredicted RBP12.32□□□□□ -0.44
LINC00654-201ENST00000379053 ZSWIM4Q9H7M6 989 aa12.32□□□□□ -0.44
LINC00654-201ENST00000379053 HELLSQ9NRZ9 838 aa12.32□□□□□ -0.44
LINC00654-201ENST00000379053 STX10O60499 249 aa12.31□□□□□ -0.44
LINC00654-201ENST00000379053 KRT5P13647 590 aa12.31□□□□□ -0.44
LINC00654-201ENST00000379053 DNM2P50570 870 aa12.31□□□□□ -0.44
LINC00654-201ENST00000379053 SV2BQ7L1I2 683 aa12.31□□□□□ -0.44
LINC00654-201ENST00000379053 C2CD5Q86YS7 1000 aa12.31□□□□□ -0.44
LINC00654-201ENST00000379053 ATP6V0A2Q9Y487 856 aa12.31□□□□□ -0.44
LINC00654-201ENST00000379053 SOS1Q07889 1333 aaPredicted RBP12.31□□□□□ -0.44
LINC00654-201ENST00000379053 B4E1Z4 1266 aa12.31□□□□□ -0.44
LINC00654-201ENST00000379053 ADCY5O95622 1261 aa12.31□□□□□ -0.44
LINC00654-201ENST00000379053 CEP85Q6P2H3 762 aa12.31□□□□□ -0.44
LINC00654-201ENST00000379053 GLT8D2Q9H1C3 349 aa12.31□□□□□ -0.44
LINC00654-201ENST00000379053 MAPKAPK5Q8IW41 473 aa12.31□□□□□ -0.44
LINC00654-201ENST00000379053 CEP135Q66GS9 1140 aa12.31□□□□□ -0.44
LINC00654-201ENST00000379053 HAUS3Q68CZ6 603 aa12.31□□□□□ -0.44
LINC00654-201ENST00000379053 IQUBQ8NA54 791 aa12.31□□□□□ -0.44
LINC00654-201ENST00000379053 PUS7Q96PZ0 661 aaKnown RBP12.31□□□□□ -0.44
LINC00654-201ENST00000379053 CCDC77Q9BR77 488 aa12.31□□□□□ -0.44
LINC00654-201ENST00000379053 TXNDC16Q9P2K2 825 aa12.31□□□□□ -0.44
LINC00654-201ENST00000379053 CNPY2Q9Y2B0 182 aa12.31□□□□□ -0.44
LINC00654-201ENST00000379053 PTPRKQ15262 1439 aa12.31□□□□□ -0.44
LINC00654-201ENST00000379053 ARHGEF35A5YM69 484 aa12.31□□□□□ -0.44
LINC00654-201ENST00000379053 VAMP4O75379 141 aa12.31□□□□□ -0.44
LINC00654-201ENST00000379053 SNX16P57768 344 aa12.31□□□□□ -0.44
LINC00654-201ENST00000379053 RAPGEF1Q13905 1077 aa12.31□□□□□ -0.44
LINC00654-201ENST00000379053 CTR9Q6PD62 1173 aa12.31□□□□□ -0.44
LINC00654-201ENST00000379053 CCDC63Q8NA47 563 aa12.31□□□□□ -0.44
LINC00654-201ENST00000379053 AS3MTQ9HBK9 375 aa12.31□□□□□ -0.44
LINC00654-201ENST00000379053 CNGA1P29973 690 aa12.3□□□□□ -0.44
LINC00654-201ENST00000379053 GTF2IP78347 998 aa12.3□□□□□ -0.44
LINC00654-201ENST00000379053 ZNF174Q15697 407 aa12.3□□□□□ -0.44
LINC00654-201ENST00000379053 USH1GQ495M9 461 aa12.3□□□□□ -0.44
LINC00654-201ENST00000379053 LPIN2Q92539 896 aa12.3□□□□□ -0.44
LINC00654-201ENST00000379053 CNKSR1Q969H4 720 aa12.3□□□□□ -0.44
LINC00654-201ENST00000379053 A0A1W2PP64 1363 aa12.3□□□□□ -0.44
LINC00654-201ENST00000379053 RTL1A6NKG5 1358 aa12.3□□□□□ -0.44
LINC00654-201ENST00000379053 STX17P56962 302 aa12.3□□□□□ -0.44
LINC00654-201ENST00000379053 KIAA1524Q8TCG1 905 aa12.3□□□□□ -0.44
LINC00654-201ENST00000379053 MAK16Q9BXY0 300 aaKnown RBP12.3□□□□□ -0.44
LINC00654-201ENST00000379053 VWA3AA6NCI4 1184 aa12.3□□□□□ -0.44
LINC00654-201ENST00000379053 TACC1O75410 805 aa12.3□□□□□ -0.44
LINC00654-201ENST00000379053 ZFYVE9O95405 1425 aa12.3□□□□□ -0.44
LINC00654-201ENST00000379053 TERF1P54274 439 aa12.3□□□□□ -0.44
LINC00654-201ENST00000379053 RNF187Q5TA31 235 aaPredicted RBP12.3□□□□□ -0.44
LINC00654-201ENST00000379053 NLGN1Q8N2Q7 840 aa12.3□□□□□ -0.44
LINC00654-201ENST00000379053 FAM169AQ9Y6X4 670 aa12.3□□□□□ -0.44
LINC00654-201ENST00000379053 SBNO1A3KN83 1393 aa12.3□□□□□ -0.44
LINC00654-201ENST00000379053 RAD50Q92878 1312 aa12.3□□□□□ -0.44
LINC00654-201ENST00000379053 CDAN1Q8IWY9 1227 aa12.3□□□□□ -0.44
LINC00654-201ENST00000379053 CCDC42Q96M95 316 aa12.3□□□□□ -0.44
LINC00654-201ENST00000379053 RNF216Q9NWF9 866 aaPredicted RBP12.3□□□□□ -0.44
LINC00654-201ENST00000379053 TTF2Q9UNY4 1162 aaKnown RBP12.3□□□□□ -0.44
LINC00654-201ENST00000379053 CFBP00751 764 aa12.29□□□□□ -0.44
LINC00654-201ENST00000379053 TNNI3KQ59H18 835 aa12.29□□□□□ -0.44
LINC00654-201ENST00000379053 ELMSAN1Q6PJG2 1045 aa12.29□□□□□ -0.44
LINC00654-201ENST00000379053 EXOC7Q9UPT5 735 aa12.29□□□□□ -0.44
LINC00654-201ENST00000379053 FPGT-TNNI3KV9GXZ4 949 aa12.29□□□□□ -0.44
LINC00654-201ENST00000379053 RAPGEF6Q8TEU7 1601 aa12.29□□□□□ -0.44
LINC00654-201ENST00000379053 EPB41P11171 864 aaKnown RBP12.29□□□□□ -0.44
LINC00654-201ENST00000379053 PAIP2Q9BPZ3 127 aaKnown RBP12.29□□□□□ -0.44
LINC00654-201ENST00000379053 USP40Q9NVE5 1235 aa12.29□□□□□ -0.44
LINC00654-201ENST00000379053 SLU7O95391 586 aaKnown RBP12.29□□□□□ -0.44
LINC00654-201ENST00000379053 GAS8O95995 478 aa12.29□□□□□ -0.44
LINC00654-201ENST00000379053 SPECC1LQ69YQ0 1117 aa12.29□□□□□ -0.44
LINC00654-201ENST00000379053 TGFBRAP1Q8WUH2 860 aa12.29□□□□□ -0.44
LINC00654-201ENST00000379053 TEKT1Q969V4 418 aa12.29□□□□□ -0.44
LINC00654-201ENST00000379053 HAUS7Q99871 368 aa12.29□□□□□ -0.44
LINC00654-201ENST00000379053 SERPINA10Q9UK55 444 aa12.29□□□□□ -0.44
LINC00654-201ENST00000379053 RPS8P62241 208 aaKnown RBP12.29□□□□□ -0.44
LINC00654-201ENST00000379053 UBXN1Q04323 297 aa12.29□□□□□ -0.44
LINC00654-201ENST00000379053 CCDC14Q49A88 953 aa12.29□□□□□ -0.44
LINC00654-201ENST00000379053 NCAPH2Q6IBW4 605 aa12.29□□□□□ -0.44
LINC00654-201ENST00000379053 LGR6Q9HBX8 967 aa12.29□□□□□ -0.44
LINC00654-201ENST00000379053 DACT1Q9NYF0 836 aa12.29□□□□□ -0.44
LINC00654-201ENST00000379053 TRAF5O00463 557 aa12.29□□□□□ -0.44
LINC00654-201ENST00000379053 SH3BP5O60239 455 aa12.29□□□□□ -0.44
LINC00654-201ENST00000379053 MAEAQ7L5Y9 396 aa12.29□□□□□ -0.44
LINC00654-201ENST00000379053 BRAPQ7Z569 592 aa12.29□□□□□ -0.44
LINC00654-201ENST00000379053 DBNDD2Q9BQY9 259 aa12.29□□□□□ -0.44
LINC00654-201ENST00000379053 CCNT1O60563 726 aaKnown RBP12.28□□□□□ -0.44
LINC00654-201ENST00000379053 ANO6Q4KMQ2 910 aa12.28□□□□□ -0.44
LINC00654-201ENST00000379053 DCAF15Q66K64 600 aa12.28□□□□□ -0.44
LINC00654-201ENST00000379053 AOPEPQ8N6M6 819 aa12.28□□□□□ -0.44
LINC00654-201ENST00000379053 KLHDC4Q8TBB5 520 aa12.28□□□□□ -0.44
LINC00654-201ENST00000379053 GPBP1L1Q9HC44 474 aaPredicted RBP12.28□□□□□ -0.44
LINC00654-201ENST00000379053 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.28□□□□□ -0.44
LINC00654-201ENST00000379053 NUP160Q12769 1436 aa12.28□□□□□ -0.44
LINC00654-201ENST00000379053 MFSD14BQ5SR56 506 aa12.28□□□□□ -0.44
LINC00654-201ENST00000379053 HACE1Q8IYU2 909 aa12.28□□□□□ -0.44
LINC00654-201ENST00000379053 KIFC2Q96AC6 838 aa12.28□□□□□ -0.44
LINC00654-201ENST00000379053 F13A1P00488 732 aa12.28□□□□□ -0.44
LINC00654-201ENST00000379053 PLCD1P51178 756 aa12.28□□□□□ -0.44
LINC00654-201ENST00000379053 GLG1Q92896 1179 aa12.28□□□□□ -0.44
LINC00654-201ENST00000379053 CGNQ9P2M7 1197 aaKnown RBP12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms