RNA–Protein interactions for RNA: ENST00000379013.6

UPK1A-202, Transcript of uroplakin 1A, humanhuman

TSL 1 (best) BASIC

Gene UPK1A, Length 1,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1A-202ENST00000379013 SPDYE2BA6NHP3 402 aa16.8■□□□□ 0.28
UPK1A-202ENST00000379013 SPDYE6P0CI01 402 aa16.8■□□□□ 0.28
UPK1A-202ENST00000379013 DLGAP5Q15398 846 aa16.8■□□□□ 0.28
UPK1A-202ENST00000379013 BMP2KLQ5H9B9 411 aa16.8■□□□□ 0.28
UPK1A-202ENST00000379013 MFSD14BQ5SR56 506 aa16.8■□□□□ 0.28
UPK1A-202ENST00000379013 TTC22Q5TAA0 569 aa16.8■□□□□ 0.28
UPK1A-202ENST00000379013 PI4K2BQ8TCG2 481 aa16.8■□□□□ 0.28
UPK1A-202ENST00000379013 OTUD7AQ8TE49 926 aaPredicted RBP16.8■□□□□ 0.28
UPK1A-202ENST00000379013 CSRNP1Q96S65 589 aa16.8■□□□□ 0.28
UPK1A-202ENST00000379013 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.8■□□□□ 0.28
UPK1A-202ENST00000379013 HDAC9Q9UKV0 1011 aa16.8■□□□□ 0.28
UPK1A-202ENST00000379013 THSD7BQ9C0I4 1608 aa16.8■□□□□ 0.28
UPK1A-202ENST00000379013 TRIM6-TRIM34B2RNG4 842 aa16.79■□□□□ 0.28
UPK1A-202ENST00000379013 EIF5BO60841 1220 aaKnown RBP16.79■□□□□ 0.28
UPK1A-202ENST00000379013 CAPN15O75808 1086 aa16.79■□□□□ 0.28
UPK1A-202ENST00000379013 SLC10A3P09131 477 aa16.79■□□□□ 0.28
UPK1A-202ENST00000379013 MCAMP43121 646 aa16.79■□□□□ 0.28
UPK1A-202ENST00000379013 MMP14P50281 582 aa16.79■□□□□ 0.28
UPK1A-202ENST00000379013 CHAF1AQ13111 956 aaPredicted RBP16.79■□□□□ 0.28
UPK1A-202ENST00000379013 RASGRF1Q13972 1273 aa16.79■□□□□ 0.28
UPK1A-202ENST00000379013 PRKG1Q13976 671 aa16.79■□□□□ 0.28
UPK1A-202ENST00000379013 ZSCAN25Q6NSZ9 544 aa16.79■□□□□ 0.28
UPK1A-202ENST00000379013 RASAL3Q86YV0 1011 aa16.79■□□□□ 0.28
UPK1A-202ENST00000379013 CDAN1Q8IWY9 1227 aa16.79■□□□□ 0.28
UPK1A-202ENST00000379013 EVI5LQ96CN4 794 aa16.79■□□□□ 0.28
UPK1A-202ENST00000379013 DNAJC2Q99543 621 aaKnown RBP16.79■□□□□ 0.28
UPK1A-202ENST00000379013 DEFB129Q9H1M3 183 aa16.79■□□□□ 0.28
UPK1A-202ENST00000379013 BOLA2Q9H3K6 86 aa16.79■□□□□ 0.28
UPK1A-202ENST00000379013 PAG1Q9NWQ8 432 aa16.79■□□□□ 0.28
UPK1A-202ENST00000379013 SUGT1Q9Y2Z0 365 aa16.79■□□□□ 0.28
UPK1A-202ENST00000379013 RFX7Q2KHR2 1363 aa16.78■□□□□ 0.28
UPK1A-202ENST00000379013 MAST3O60307 1309 aa16.78■□□□□ 0.28
UPK1A-202ENST00000379013 SALL1Q9NSC2 1324 aa16.78■□□□□ 0.28
UPK1A-202ENST00000379013 HIP1O00291 1037 aa16.78■□□□□ 0.28
UPK1A-202ENST00000379013 NOGQ13253 232 aa16.78■□□□□ 0.28
UPK1A-202ENST00000379013 CASC1Q6TDU7 716 aa16.78■□□□□ 0.28
UPK1A-202ENST00000379013 TTF2Q9UNY4 1162 aaKnown RBP16.78■□□□□ 0.28
UPK1A-202ENST00000379013 SLF2Q8IX21 1173 aa16.77■□□□□ 0.28
UPK1A-202ENST00000379013 CCDC102AQ96A19 550 aa16.77■□□□□ 0.28
UPK1A-202ENST00000379013 HMG20BQ9P0W2 317 aa16.77■□□□□ 0.28
UPK1A-202ENST00000379013 ZFYP08048 801 aaPredicted RBP16.76■□□□□ 0.27
UPK1A-202ENST00000379013 MAP3K12Q12852 859 aa16.76■□□□□ 0.27
UPK1A-202ENST00000379013 LDLRAD1Q5T700 205 aa16.76■□□□□ 0.27
UPK1A-202ENST00000379013 NBPF12Q5TAG4 269 aaPredicted RBP16.76■□□□□ 0.27
UPK1A-202ENST00000379013 TSHZ3Q63HK5 1081 aa16.76■□□□□ 0.27
UPK1A-202ENST00000379013 TDRD3Q9H7E2 651 aaKnown RBP16.76■□□□□ 0.27
UPK1A-202ENST00000379013 MYO5AQ9Y4I1 1855 aaKnown RBP16.76■□□□□ 0.27
UPK1A-202ENST00000379013 GOLIM4O00461 696 aa16.75■□□□□ 0.27
UPK1A-202ENST00000379013 FKBP1BP68106 108 aa16.75■□□□□ 0.27
UPK1A-202ENST00000379013 APOBEC3FQ8IUX4 373 aaKnown RBP16.75■□□□□ 0.27
UPK1A-202ENST00000379013 RILPL2Q969X0 211 aa16.75■□□□□ 0.27
UPK1A-202ENST00000379013 FSD1Q9BTV5 496 aa16.75■□□□□ 0.27
UPK1A-202ENST00000379013 RNF186Q9NXI6 227 aa16.75■□□□□ 0.27
UPK1A-202ENST00000379013 LRP2BPQ9P2M1 347 aa16.75■□□□□ 0.27
UPK1A-202ENST00000379013 ZNF70Q9UC06 446 aaPredicted RBP16.75■□□□□ 0.27
UPK1A-202ENST00000379013 SSC5DA1L4H1 1573 aa16.75■□□□□ 0.27
UPK1A-202ENST00000379013 MYH2Q9UKX2 1941 aa16.74■□□□□ 0.27
UPK1A-202ENST00000379013 LDHBP07195 334 aaKnown RBP16.74■□□□□ 0.27
UPK1A-202ENST00000379013 ZAP70P43403 619 aa16.74■□□□□ 0.27
UPK1A-202ENST00000379013 CRKP46108 304 aa16.74■□□□□ 0.27
UPK1A-202ENST00000379013 RBM5P52756 815 aaKnown RBP eCLIP16.74■□□□□ 0.27
UPK1A-202ENST00000379013 GSTO1P78417 241 aa16.74■□□□□ 0.27
UPK1A-202ENST00000379013 RASA3Q14644 834 aa16.74■□□□□ 0.27
UPK1A-202ENST00000379013 SPDYE2Q495Y8 402 aa16.74■□□□□ 0.27
UPK1A-202ENST00000379013 ERICH6Q7L0X2 663 aa16.74■□□□□ 0.27
UPK1A-202ENST00000379013 KBTBD3Q8NAB2 608 aa16.74■□□□□ 0.27
UPK1A-202ENST00000379013 VEZTQ9HBM0 779 aa16.74■□□□□ 0.27
UPK1A-202ENST00000379013 SERPINA10Q9UK55 444 aa16.74■□□□□ 0.27
UPK1A-202ENST00000379013 CASP8AP2Q9UKL3 1982 aa16.74■□□□□ 0.27
UPK1A-202ENST00000379013 COL1A1P02452 1464 aaPredicted RBP16.73■□□□□ 0.27
UPK1A-202ENST00000379013 TRPA1O75762 1119 aa16.73■□□□□ 0.27
UPK1A-202ENST00000379013 MKRN3Q13064 507 aaKnown RBP16.73■□□□□ 0.27
UPK1A-202ENST00000379013 TTLL12Q14166 644 aaPredicted RBP16.73■□□□□ 0.27
UPK1A-202ENST00000379013 APOBEC3HQ6NTF7 200 aaKnown RBP16.73■□□□□ 0.27
UPK1A-202ENST00000379013 DZIP1Q86YF9 867 aaKnown RBP16.73■□□□□ 0.27
UPK1A-202ENST00000379013 CERS3Q8IU89 383 aa16.73■□□□□ 0.27
UPK1A-202ENST00000379013 CLMNQ96JQ2 1002 aa16.73■□□□□ 0.27
UPK1A-202ENST00000379013 TEPSINQ96N21 525 aa16.73■□□□□ 0.27
UPK1A-202ENST00000379013 BEGAINQ9BUH8 593 aa16.73■□□□□ 0.27
UPK1A-202ENST00000379013 SNRKQ9NRH2 765 aa16.73■□□□□ 0.27
UPK1A-202ENST00000379013 ABCF2Q9UG63 623 aa16.73■□□□□ 0.27
UPK1A-202ENST00000379013 USP2O75604 605 aaPredicted RBP16.72■□□□□ 0.27
UPK1A-202ENST00000379013 IDH1O75874 414 aaKnown RBP16.72■□□□□ 0.27
UPK1A-202ENST00000379013 CYP2E1P05181 493 aaPredicted RBP16.72■□□□□ 0.27
UPK1A-202ENST00000379013 CACNB3P54284 484 aa16.72■□□□□ 0.27
UPK1A-202ENST00000379013 RUFY2Q8WXA3 655 aa16.72■□□□□ 0.27
UPK1A-202ENST00000379013 RAI14Q9P0K7 980 aa16.72■□□□□ 0.27
UPK1A-202ENST00000379013 ANGEL1Q9UNK9 670 aaKnown RBP16.72■□□□□ 0.27
UPK1A-202ENST00000379013 PAPPA2Q9BXP8 1791 aa16.72■□□□□ 0.27
UPK1A-202ENST00000379013 LDHCP07864 332 aa16.71■□□□□ 0.27
UPK1A-202ENST00000379013 GSPT1P15170 499 aaKnown RBP16.71■□□□□ 0.27
UPK1A-202ENST00000379013 SDSP20132 328 aa16.71■□□□□ 0.27
UPK1A-202ENST00000379013 PI16Q6UXB8 463 aa16.71■□□□□ 0.27
UPK1A-202ENST00000379013 NOL10Q9BSC4 688 aaKnown RBP16.71■□□□□ 0.27
UPK1A-202ENST00000379013 R3HDMLQ9H3Y0 253 aa16.71■□□□□ 0.27
UPK1A-202ENST00000379013 DIAPH3Q9NSV4 1193 aa16.71■□□□□ 0.27
UPK1A-202ENST00000379013 TCP10L2B9ZVM9 353 aa16.7■□□□□ 0.26
UPK1A-202ENST00000379013 CDC45O75419 566 aa16.7■□□□□ 0.26
UPK1A-202ENST00000379013 GJA5P36382 358 aa16.7■□□□□ 0.26
UPK1A-202ENST00000379013 MFAP1P55081 439 aaKnown RBP16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms