RNA–Protein interactions for RNA: ENST00000378910.9

NPHS1-202, Transcript of NPHS1, nephrin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHS1, Length 4,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHS1-202ENST00000378910 EXOC8Q8IYI6 725 aa13.31□□□□□ -0.28
NPHS1-202ENST00000378910 RASEFQ8IZ41 740 aa13.31□□□□□ -0.28
NPHS1-202ENST00000378910 SSRP1Q08945 709 aaKnown RBP13.31□□□□□ -0.28
NPHS1-202ENST00000378910 KANK3Q6NY19 840 aa13.31□□□□□ -0.28
NPHS1-202ENST00000378910 GET4Q7L5D6 327 aaPredicted RBP13.31□□□□□ -0.28
NPHS1-202ENST00000378910 ATL2Q8NHH9 583 aa13.31□□□□□ -0.28
NPHS1-202ENST00000378910 SPTLC3Q9NUV7 552 aa13.31□□□□□ -0.28
NPHS1-202ENST00000378910 TPX2Q9ULW0 747 aaKnown RBP13.31□□□□□ -0.28
NPHS1-202ENST00000378910 PLA2R1Q13018 1463 aa13.31□□□□□ -0.28
NPHS1-202ENST00000378910 ST5P78524 1137 aa13.31□□□□□ -0.28
NPHS1-202ENST00000378910 ZNF569Q5MCW4 686 aa13.31□□□□□ -0.28
NPHS1-202ENST00000378910 SLC30A9Q6PML9 568 aa13.31□□□□□ -0.28
NPHS1-202ENST00000378910 UNC5CLQ8IV45 518 aa13.31□□□□□ -0.28
NPHS1-202ENST00000378910 CCDC65Q8IXS2 484 aa13.31□□□□□ -0.28
NPHS1-202ENST00000378910 DDX27Q96GQ7 796 aaKnown RBP13.31□□□□□ -0.28
NPHS1-202ENST00000378910 CDK5RAP3Q96JB5 506 aa13.31□□□□□ -0.28
NPHS1-202ENST00000378910 IFIT3O14879 490 aaKnown RBP13.3□□□□□ -0.28
NPHS1-202ENST00000378910 XPO4Q9C0E2 1151 aaKnown RBP13.3□□□□□ -0.28
NPHS1-202ENST00000378910 SNCBQ16143 134 aa13.3□□□□□ -0.28
NPHS1-202ENST00000378910 CWF19L2Q2TBE0 894 aaKnown RBP13.3□□□□□ -0.28
NPHS1-202ENST00000378910 ARMC3Q5W041 872 aa13.3□□□□□ -0.28
NPHS1-202ENST00000378910 CAPRIN2Q6IMN6 1127 aaKnown RBP13.3□□□□□ -0.28
NPHS1-202ENST00000378910 KSR2Q6VAB6 950 aa13.3□□□□□ -0.28
NPHS1-202ENST00000378910 TDRD7Q8NHU6 1098 aaKnown RBP13.3□□□□□ -0.28
NPHS1-202ENST00000378910 AKAP2Q9Y2D5 859 aa13.3□□□□□ -0.28
NPHS1-202ENST00000378910 FAM135BQ49AJ0 1406 aa13.3□□□□□ -0.28
NPHS1-202ENST00000378910 NDUFAB1O14561 156 aa13.3□□□□□ -0.28
NPHS1-202ENST00000378910 SLFNL1Q499Z3 407 aa13.3□□□□□ -0.28
NPHS1-202ENST00000378910 PAF1Q8N7H5 531 aa13.3□□□□□ -0.28
NPHS1-202ENST00000378910 NAPBQ9H115 298 aa13.3□□□□□ -0.28
NPHS1-202ENST00000378910 JADE2Q9NQC1 790 aa13.3□□□□□ -0.28
NPHS1-202ENST00000378910 PPFIA4O75335 1185 aa13.3□□□□□ -0.28
NPHS1-202ENST00000378910 CORO7P57737 925 aa13.3□□□□□ -0.28
NPHS1-202ENST00000378910 PIP4K2BP78356 416 aa13.3□□□□□ -0.28
NPHS1-202ENST00000378910 MPHOSPH8Q99549 860 aa13.3□□□□□ -0.28
NPHS1-202ENST00000378910 ABCC1P33527 1531 aa13.3□□□□□ -0.28
NPHS1-202ENST00000378910 CD109Q6YHK3 1445 aa13.29□□□□□ -0.28
NPHS1-202ENST00000378910 ATP5J2-PTCD1G3V325 749 aa13.29□□□□□ -0.28
NPHS1-202ENST00000378910 USO1O60763 962 aaKnown RBP13.29□□□□□ -0.28
NPHS1-202ENST00000378910 PTCD1O75127 700 aaKnown RBP13.29□□□□□ -0.28
NPHS1-202ENST00000378910 CYP2E1P05181 493 aaPredicted RBP13.29□□□□□ -0.28
NPHS1-202ENST00000378910 ETF1P62495 437 aaKnown RBP13.29□□□□□ -0.28
NPHS1-202ENST00000378910 TUBB4BP68371 445 aa13.29□□□□□ -0.28
NPHS1-202ENST00000378910 PTH1RQ03431 593 aa13.29□□□□□ -0.28
NPHS1-202ENST00000378910 HOOK3Q86VS8 718 aa13.29□□□□□ -0.28
NPHS1-202ENST00000378910 LINS1Q8NG48 757 aa13.29□□□□□ -0.28
NPHS1-202ENST00000378910 SLC26A6Q9BXS9 759 aa13.29□□□□□ -0.28
NPHS1-202ENST00000378910 SPTY2D1Q68D10 685 aaPredicted RBP13.29□□□□□ -0.28
NPHS1-202ENST00000378910 PLEKHA4Q9H4M7 779 aa13.29□□□□□ -0.28
NPHS1-202ENST00000378910 MYBL2P10244 700 aa13.29□□□□□ -0.28
NPHS1-202ENST00000378910 HNRNPH1P31943 449 aaKnown RBP13.29□□□□□ -0.28
NPHS1-202ENST00000378910 MATR3P43243 847 aaKnown RBP eCLIP13.29□□□□□ -0.28
NPHS1-202ENST00000378910 CCT5P48643 541 aa13.29□□□□□ -0.28
NPHS1-202ENST00000378910 DNA2P51530 1060 aa13.29□□□□□ -0.28
NPHS1-202ENST00000378910 MXRA7P84157 204 aa13.29□□□□□ -0.28
NPHS1-202ENST00000378910 METTL24Q5JXM2 366 aa13.29□□□□□ -0.28
NPHS1-202ENST00000378910 BRAPQ7Z569 592 aa13.29□□□□□ -0.28
NPHS1-202ENST00000378910 RABEP2Q9H5N1 569 aa13.29□□□□□ -0.28
NPHS1-202ENST00000378910 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.29□□□□□ -0.28
NPHS1-202ENST00000378910 TPCN1Q9ULQ1 816 aa13.29□□□□□ -0.28
NPHS1-202ENST00000378910 TUBBP07437 444 aa13.28□□□□□ -0.28
NPHS1-202ENST00000378910 KIF6Q6ZMV9 814 aa13.28□□□□□ -0.28
NPHS1-202ENST00000378910 CCDC26Q8TAB7 109 aa13.28□□□□□ -0.28
NPHS1-202ENST00000378910 ANKRD24Q8TF21 1146 aa13.28□□□□□ -0.28
NPHS1-202ENST00000378910 TAF4BQ92750 862 aa13.28□□□□□ -0.28
NPHS1-202ENST00000378910 PAIP2BQ9ULR5 123 aaKnown RBP13.28□□□□□ -0.28
NPHS1-202ENST00000378910 KIAA0232Q92628 1395 aa13.28□□□□□ -0.28
NPHS1-202ENST00000378910 NCKAP5LQ9HCH0 1330 aa13.28□□□□□ -0.28
NPHS1-202ENST00000378910 WDHD1O75717 1129 aaPredicted RBP13.28□□□□□ -0.28
NPHS1-202ENST00000378910 NBPF7P0C2Y1 421 aaPredicted RBP13.28□□□□□ -0.28
NPHS1-202ENST00000378910 TRIM21P19474 475 aaKnown RBP13.28□□□□□ -0.28
NPHS1-202ENST00000378910 AFMP43652 599 aa13.28□□□□□ -0.28
NPHS1-202ENST00000378910 EVA1CP58658 441 aa13.28□□□□□ -0.28
NPHS1-202ENST00000378910 GNPTABQ3T906 1256 aa13.28□□□□□ -0.28
NPHS1-202ENST00000378910 TMEM67Q5HYA8 995 aa13.28□□□□□ -0.28
NPHS1-202ENST00000378910 B4GALNT2Q8NHY0 566 aa13.28□□□□□ -0.28
NPHS1-202ENST00000378910 TRIM11Q96F44 468 aa13.28□□□□□ -0.28
NPHS1-202ENST00000378910 ZSWIM6Q9HCJ5 1215 aa13.28□□□□□ -0.28
NPHS1-202ENST00000378910 ARHGAP6O43182 974 aa13.28□□□□□ -0.28
NPHS1-202ENST00000378910 CHMP4BP1P59074 171 aa13.28□□□□□ -0.28
NPHS1-202ENST00000378910 C16orf87Q6PH81 154 aa13.28□□□□□ -0.28
NPHS1-202ENST00000378910 EYA1Q99502 592 aa13.28□□□□□ -0.28
NPHS1-202ENST00000378910 NCOA5Q9HCD5 579 aaKnown RBP13.28□□□□□ -0.28
NPHS1-202ENST00000378910 STAP2Q9UGK3 403 aa13.28□□□□□ -0.28
NPHS1-202ENST00000378910 CCDC96Q2M329 555 aa13.27□□□□□ -0.28
NPHS1-202ENST00000378910 SH2D4BQ5SQS7 431 aa13.27□□□□□ -0.28
NPHS1-202ENST00000378910 CTAGE1Q96RT6 745 aa13.27□□□□□ -0.28
NPHS1-202ENST00000378910 LLPHQ9BRT6 129 aaKnown RBP13.27□□□□□ -0.28
NPHS1-202ENST00000378910 ELP1O95163 1332 aa13.27□□□□□ -0.28
NPHS1-202ENST00000378910 PRC1O43663 620 aa13.27□□□□□ -0.28
NPHS1-202ENST00000378910 CKAP4Q07065 602 aaKnown RBP13.27□□□□□ -0.28
NPHS1-202ENST00000378910 FBXW10Q5XX13 1052 aa13.27□□□□□ -0.28
NPHS1-202ENST00000378910 SSH3Q8TE77 659 aa13.27□□□□□ -0.28
NPHS1-202ENST00000378910 USP44Q9H0E7 712 aa13.27□□□□□ -0.28
NPHS1-202ENST00000378910 FKBP15Q5T1M5 1219 aa13.27□□□□□ -0.29
NPHS1-202ENST00000378910 FAM76AQ8TAV0 307 aa13.27□□□□□ -0.29
NPHS1-202ENST00000378910 C17orf50Q8WW18 174 aa13.27□□□□□ -0.29
NPHS1-202ENST00000378910 UIMC1Q96RL1 719 aa13.27□□□□□ -0.29
NPHS1-202ENST00000378910 TRAIPQ9BWF2 469 aa13.27□□□□□ -0.29
NPHS1-202ENST00000378910 SEC31AO94979 1220 aaKnown RBP13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms