RNA–Protein interactions for RNA: ENST00000378037.9

CKAP2-203, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 3,629 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-203ENST00000378037 SOS2Q07890 1332 aaPredicted RBP9.44□□□□□ -0.9
CKAP2-203ENST00000378037 LIG1P18858 919 aa9.44□□□□□ -0.9
CKAP2-203ENST00000378037 SCRN1Q12765 414 aa9.44□□□□□ -0.9
CKAP2-203ENST00000378037 STOX1Q6ZVD7 989 aa9.44□□□□□ -0.9
CKAP2-203ENST00000378037 TXNRD3Q86VQ6 643 aa9.44□□□□□ -0.9
CKAP2-203ENST00000378037 ZNF444Q8N0Y2 327 aaPredicted RBP9.44□□□□□ -0.9
CKAP2-203ENST00000378037 STAP2Q9UGK3 403 aa9.44□□□□□ -0.9
CKAP2-203ENST00000378037 CDC25AP30304 524 aa9.44□□□□□ -0.9
CKAP2-203ENST00000378037 EVX2Q03828 476 aa9.44□□□□□ -0.9
CKAP2-203ENST00000378037 DEFB132Q7Z7B7 95 aa9.44□□□□□ -0.9
CKAP2-203ENST00000378037 CCAR1Q8IX12 1150 aaKnown RBP9.44□□□□□ -0.9
CKAP2-203ENST00000378037 LPIN2Q92539 896 aa9.44□□□□□ -0.9
CKAP2-203ENST00000378037 APPBP2Q92624 585 aa9.44□□□□□ -0.9
CKAP2-203ENST00000378037 ZSCAN31Q96LW9 406 aaPredicted RBP9.44□□□□□ -0.9
CKAP2-203ENST00000378037 RGS12O14924 1447 aa9.43□□□□□ -0.9
CKAP2-203ENST00000378037 SLIT2O94813 1529 aa9.43□□□□□ -0.9
CKAP2-203ENST00000378037 CSPP1Q1MSJ5 1256 aa9.43□□□□□ -0.9
CKAP2-203ENST00000378037 IQCA1Q86XH1 822 aa9.43□□□□□ -0.9
CKAP2-203ENST00000378037 LMBRD1Q9NUN5 540 aa9.43□□□□□ -0.9
CKAP2-203ENST00000378037 TRMT1Q9NXH9 659 aaKnown RBP9.43□□□□□ -0.9
CKAP2-203ENST00000378037 VPS54Q9P1Q0 977 aa9.43□□□□□ -0.9
CKAP2-203ENST00000378037 ZDHHC9Q9Y397 364 aa9.43□□□□□ -0.9
CKAP2-203ENST00000378037 MBD3O95983 291 aa9.43□□□□□ -0.9
CKAP2-203ENST00000378037 IBSPP21815 317 aaPredicted RBP9.43□□□□□ -0.9
CKAP2-203ENST00000378037 EN1Q05925 392 aaPredicted RBP9.43□□□□□ -0.9
CKAP2-203ENST00000378037 IFIT1BQ5T764 474 aaKnown RBP9.43□□□□□ -0.9
CKAP2-203ENST00000378037 CPLX3Q8WVH0 158 aa9.43□□□□□ -0.9
CKAP2-203ENST00000378037 V9GY48 417 aaPredicted RBP9.43□□□□□ -0.9
CKAP2-203ENST00000378037 MAP4K1Q92918 833 aa9.43□□□□□ -0.9
CKAP2-203ENST00000378037 PCMTD1Q96MG8 357 aaPredicted RBP9.43□□□□□ -0.9
CKAP2-203ENST00000378037 ZBTB7AO95365 584 aa9.42□□□□□ -0.9
CKAP2-203ENST00000378037 USP17L8P0C7I0 530 aa9.42□□□□□ -0.9
CKAP2-203ENST00000378037 ST5P78524 1137 aa9.42□□□□□ -0.9
CKAP2-203ENST00000378037 ENOX2Q16206 610 aaKnown RBP9.42□□□□□ -0.9
CKAP2-203ENST00000378037 MFSD14BQ5SR56 506 aa9.42□□□□□ -0.9
CKAP2-203ENST00000378037 HEATR3Q7Z4Q2 680 aa9.42□□□□□ -0.9
CKAP2-203ENST00000378037 RASGRP4Q8TDF6 673 aa9.42□□□□□ -0.9
CKAP2-203ENST00000378037 SH2B1Q9NRF2 756 aaPredicted RBP9.42□□□□□ -0.9
CKAP2-203ENST00000378037 LDHBP07195 334 aaKnown RBP9.42□□□□□ -0.9
CKAP2-203ENST00000378037 STX17P56962 302 aa9.42□□□□□ -0.9
CKAP2-203ENST00000378037 NLRP5P59047 1200 aa9.42□□□□□ -0.9
CKAP2-203ENST00000378037 OSBPL3Q9H4L5 887 aa9.42□□□□□ -0.9
CKAP2-203ENST00000378037 TSPY3P0CV98 308 aa9.42□□□□□ -0.9
CKAP2-203ENST00000378037 TSPY8P0CW00 308 aa9.42□□□□□ -0.9
CKAP2-203ENST00000378037 KLHL40Q2TBA0 621 aa9.42□□□□□ -0.9
CKAP2-203ENST00000378037 TTC6Q86TZ1 520 aa9.42□□□□□ -0.9
CKAP2-203ENST00000378037 CTCFLQ8NI51 663 aaPredicted RBP9.42□□□□□ -0.9
CKAP2-203ENST00000378037 MMP10P09238 476 aa9.41□□□□□ -0.9
CKAP2-203ENST00000378037 CHRNA5P30532 468 aa9.41□□□□□ -0.9
CKAP2-203ENST00000378037 GRM1Q13255 1194 aa9.41□□□□□ -0.9
CKAP2-203ENST00000378037 MAP3K11Q16584 847 aa9.41□□□□□ -0.9
CKAP2-203ENST00000378037 FAM43AQ8N2R8 423 aa9.41□□□□□ -0.9
CKAP2-203ENST00000378037 GPKOWQ92917 476 aaPredicted RBP eCLIP9.41□□□□□ -0.93e-11■□□□□ 10.3
CKAP2-203ENST00000378037 CLIC6Q96NY7 704 aa9.41□□□□□ -0.9
CKAP2-203ENST00000378037 CABP5Q9NP86 173 aa9.41□□□□□ -0.9
CKAP2-203ENST00000378037 GPCPD1Q9NPB8 672 aa9.41□□□□□ -0.9
CKAP2-203ENST00000378037 ESPNB1AK53 854 aa9.41□□□□□ -0.9
CKAP2-203ENST00000378037 SERPINB2P05120 415 aa9.41□□□□□ -0.9
CKAP2-203ENST00000378037 UQCRFS1P1P0C7P4 283 aa9.41□□□□□ -0.9
CKAP2-203ENST00000378037 RTN1Q16799 776 aa9.41□□□□□ -0.9
CKAP2-203ENST00000378037 ZNF827Q17R98 1081 aa9.41□□□□□ -0.9
CKAP2-203ENST00000378037 ANO6Q4KMQ2 910 aa9.41□□□□□ -0.9
CKAP2-203ENST00000378037 KRT27Q7Z3Y8 459 aa9.41□□□□□ -0.9
CKAP2-203ENST00000378037 IFNL3Q8IZI9 196 aa9.41□□□□□ -0.9
CKAP2-203ENST00000378037 USP28Q96RU2 1077 aa9.41□□□□□ -0.9
CKAP2-203ENST00000378037 UBA5Q9GZZ9 404 aa9.41□□□□□ -0.9
CKAP2-203ENST00000378037 PKD2L1Q9P0L9 805 aa9.41□□□□□ -0.9
CKAP2-203ENST00000378037 MRVI1Q9Y6F6 885 aa9.41□□□□□ -0.9
CKAP2-203ENST00000378037 PAPPAQ13219 1627 aa9.41□□□□□ -0.9
CKAP2-203ENST00000378037 SPATA31A6Q5VVP1 1343 aa9.41□□□□□ -0.9
CKAP2-203ENST00000378037 CLRN2A0PK11 232 aa9.41□□□□□ -0.9
CKAP2-203ENST00000378037 PSDA5PKW4 1024 aaPredicted RBP9.41□□□□□ -0.9
CKAP2-203ENST00000378037 ANAPC15P60006 121 aa9.41□□□□□ -0.9
CKAP2-203ENST00000378037 NECTIN1Q15223 517 aa9.41□□□□□ -0.9
CKAP2-203ENST00000378037 ZNF174Q15697 407 aa9.41□□□□□ -0.9
CKAP2-203ENST00000378037 AMIGO3Q86WK7 504 aa9.41□□□□□ -0.9
CKAP2-203ENST00000378037 MTMR6Q9Y217 621 aa9.41□□□□□ -0.9
CKAP2-203ENST00000378037 GJA3Q9Y6H8 435 aa9.41□□□□□ -0.9
CKAP2-203ENST00000378037 LRP5O75197 1615 aa9.4□□□□□ -0.9
CKAP2-203ENST00000378037 SPATA31A1Q5TZJ5 1347 aa9.4□□□□□ -0.9
CKAP2-203ENST00000378037 CCDC192P0DO97 292 aa9.4□□□□□ -0.9
CKAP2-203ENST00000378037 LMOD1P29536 600 aaPredicted RBP9.4□□□□□ -0.9
CKAP2-203ENST00000378037 RFX5P48382 616 aaPredicted RBP9.4□□□□□ -0.9
CKAP2-203ENST00000378037 SNAP25P60880 206 aa9.4□□□□□ -0.9
CKAP2-203ENST00000378037 SSRP1Q08945 709 aaKnown RBP9.4□□□□□ -0.9
CKAP2-203ENST00000378037 RAD51AP2Q09MP3 1159 aa9.4□□□□□ -0.9
CKAP2-203ENST00000378037 TTF1Q15361 905 aaPredicted RBP9.4□□□□□ -0.9
CKAP2-203ENST00000378037 TBC1D10CQ8IV04 446 aa9.4□□□□□ -0.9
CKAP2-203ENST00000378037 SPICE1Q8N0Z3 855 aa9.4□□□□□ -0.9
CKAP2-203ENST00000378037 TSC1Q92574 1164 aa9.4□□□□□ -0.9
CKAP2-203ENST00000378037 PGBD1Q96JS3 809 aa9.4□□□□□ -0.9
CKAP2-203ENST00000378037 GJD4Q96KN9 370 aaPredicted RBP9.4□□□□□ -0.9
CKAP2-203ENST00000378037 NR1I2O75469 434 aa9.4□□□□□ -0.9
CKAP2-203ENST00000378037 ADCY5O95622 1261 aa9.4□□□□□ -0.9
CKAP2-203ENST00000378037 MCM7P33993 719 aa9.4□□□□□ -0.9
CKAP2-203ENST00000378037 NR5A1Q13285 461 aa9.4□□□□□ -0.9
CKAP2-203ENST00000378037 RASGRP2Q7LDG7 609 aa9.4□□□□□ -0.9
CKAP2-203ENST00000378037 TEX11Q8IYF3 940 aa9.4□□□□□ -0.9
CKAP2-203ENST00000378037 LRRC47Q8N1G4 583 aaKnown RBP9.4□□□□□ -0.9
CKAP2-203ENST00000378037 RRAGDQ9NQL2 400 aaPredicted RBP9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms