RNA–Protein interactions for RNA: ENST00000377797.7

TCOF1-202, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 5,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-202ENST00000377797 A0A0U1RQG5 324 aaPredicted RBP16.65■□□□□ 0.26
TCOF1-202ENST00000377797 POLD1P28340 1107 aa16.64■□□□□ 0.26
TCOF1-202ENST00000377797 GTF2IP78347 998 aa16.64■□□□□ 0.26
TCOF1-202ENST00000377797 PPARAQ07869 468 aa16.64■□□□□ 0.26
TCOF1-202ENST00000377797 JDP2Q8WYK2 163 aa16.64■□□□□ 0.26
TCOF1-202ENST00000377797 OSBP2Q969R2 916 aa16.64■□□□□ 0.26
TCOF1-202ENST00000377797 RBM28Q9NW13 759 aaKnown RBP16.64■□□□□ 0.26
TCOF1-202ENST00000377797 V9GY48 417 aaPredicted RBP16.64■□□□□ 0.26
TCOF1-202ENST00000377797 ATL3Q6DD88 541 aa16.64■□□□□ 0.25
TCOF1-202ENST00000377797 CCDC70Q6NSX1 233 aa16.64■□□□□ 0.25
TCOF1-202ENST00000377797 LMBRD1Q9NUN5 540 aa16.64■□□□□ 0.25
TCOF1-202ENST00000377797 MST1RQ04912 1400 aa16.64■□□□□ 0.25
TCOF1-202ENST00000377797 RPS6KA4O75676 772 aa16.64■□□□□ 0.25
TCOF1-202ENST00000377797 DEXIO95424 95 aa16.64■□□□□ 0.25
TCOF1-202ENST00000377797 ALDH1B1P30837 517 aa16.64■□□□□ 0.25
TCOF1-202ENST00000377797 KRT2P35908 639 aa16.64■□□□□ 0.25
TCOF1-202ENST00000377797 TRIM28Q13263 835 aaKnown RBP16.64■□□□□ 0.25
TCOF1-202ENST00000377797 NLGN1Q8N2Q7 840 aa16.64■□□□□ 0.25
TCOF1-202ENST00000377797 TBC1D22AQ8WUA7 517 aa16.64■□□□□ 0.25
TCOF1-202ENST00000377797 DNAJC25Q9H1X3 360 aa16.64■□□□□ 0.25
TCOF1-202ENST00000377797 TGFBRAP1Q8WUH2 860 aa16.64■□□□□ 0.25
TCOF1-202ENST00000377797 ZNF274Q96GC6 653 aaPredicted RBP16.64■□□□□ 0.25
TCOF1-202ENST00000377797 SNAP23O00161 211 aa16.63■□□□□ 0.25
TCOF1-202ENST00000377797 IDEP14735 1019 aa16.63■□□□□ 0.25
TCOF1-202ENST00000377797 AFMP43652 599 aa16.63■□□□□ 0.25
TCOF1-202ENST00000377797 CALML4Q96GE6 196 aa16.63■□□□□ 0.25
TCOF1-202ENST00000377797 AFF2P51816 1311 aa16.63■□□□□ 0.25
TCOF1-202ENST00000377797 ATP10DQ9P241 1426 aa16.63■□□□□ 0.25
TCOF1-202ENST00000377797 SERPINB2P05120 415 aa16.63■□□□□ 0.25
TCOF1-202ENST00000377797 FLAD1Q8NFF5 587 aa16.63■□□□□ 0.25
TCOF1-202ENST00000377797 NCOA3Q9Y6Q9 1424 aa16.63■□□□□ 0.25
TCOF1-202ENST00000377797 TYRO3Q06418 890 aa16.63■□□□□ 0.25
TCOF1-202ENST00000377797 FAM177A1Q8N128 213 aaPredicted RBP16.63■□□□□ 0.25
TCOF1-202ENST00000377797 EIF5P55010 431 aaKnown RBP16.62■□□□□ 0.25
TCOF1-202ENST00000377797 RRP36Q96EU6 259 aaKnown RBP16.62■□□□□ 0.25
TCOF1-202ENST00000377797 PYM1Q9BRP8 204 aaKnown RBP16.62■□□□□ 0.25
TCOF1-202ENST00000377797 MYOM1P52179 1685 aa16.62■□□□□ 0.25
TCOF1-202ENST00000377797 A0A1B0GVL5 298 aa16.62■□□□□ 0.25
TCOF1-202ENST00000377797 ATP2B4P23634 1241 aa16.62■□□□□ 0.25
TCOF1-202ENST00000377797 RBM26Q5T8P6 1007 aaKnown RBP16.62■□□□□ 0.25
TCOF1-202ENST00000377797 DIS3L2Q8IYB7 885 aaKnown RBP16.62■□□□□ 0.25
TCOF1-202ENST00000377797 C6orf50Q9HD87 102 aa16.62■□□□□ 0.25
TCOF1-202ENST00000377797 DCCP43146 1447 aa16.62■□□□□ 0.25
TCOF1-202ENST00000377797 ADD2P35612 726 aa16.62■□□□□ 0.25
TCOF1-202ENST00000377797 CERS3Q8IU89 383 aa16.62■□□□□ 0.25
TCOF1-202ENST00000377797 M0R2C6 588 aa16.62■□□□□ 0.25
TCOF1-202ENST00000377797 GADD45BO75293 160 aaPredicted RBP16.62■□□□□ 0.25
TCOF1-202ENST00000377797 PDIA6Q15084 440 aa16.62■□□□□ 0.25
TCOF1-202ENST00000377797 NECTIN1Q15223 517 aa16.62■□□□□ 0.25
TCOF1-202ENST00000377797 PUS7LQ9H0K6 701 aaKnown RBP16.62■□□□□ 0.25
TCOF1-202ENST00000377797 OVOS2A0A0G2JMS6 1433 aa16.61■□□□□ 0.25
TCOF1-202ENST00000377797 TOP1P11387 765 aaKnown RBP16.61■□□□□ 0.25
TCOF1-202ENST00000377797 ADD1P35611 737 aaKnown RBP16.61■□□□□ 0.25
TCOF1-202ENST00000377797 LEO1Q8WVC0 666 aaPredicted RBP16.61■□□□□ 0.25
TCOF1-202ENST00000377797 PDE6BP35913 854 aa16.61■□□□□ 0.25
TCOF1-202ENST00000377797 FOXO4P98177 505 aa16.61■□□□□ 0.25
TCOF1-202ENST00000377797 TFAP4Q01664 338 aa16.61■□□□□ 0.25
TCOF1-202ENST00000377797 CHAMP1Q96JM3 812 aa16.61■□□□□ 0.25
TCOF1-202ENST00000377797 KIF20BQ96Q89 1820 aa16.61■□□□□ 0.25
TCOF1-202ENST00000377797 PFKFB2O60825 505 aa16.61■□□□□ 0.25
TCOF1-202ENST00000377797 FAM47AQ5JRC9 791 aa16.61■□□□□ 0.25
TCOF1-202ENST00000377797 KRT40Q6A162 431 aa16.61■□□□□ 0.25
TCOF1-202ENST00000377797 MTMR6Q9Y217 621 aa16.61■□□□□ 0.25
TCOF1-202ENST00000377797 CPDO75976 1380 aa16.61■□□□□ 0.25
TCOF1-202ENST00000377797 RABL6Q3YEC7 729 aaPredicted RBP16.61■□□□□ 0.25
TCOF1-202ENST00000377797 PARP1P09874 1014 aaKnown RBP16.6■□□□□ 0.25
TCOF1-202ENST00000377797 EIF6P56537 245 aaKnown RBP16.6■□□□□ 0.25
TCOF1-202ENST00000377797 TNIP1Q15025 636 aa16.6■□□□□ 0.25
TCOF1-202ENST00000377797 RASGRF1Q13972 1273 aa16.6■□□□□ 0.25
TCOF1-202ENST00000377797 RILPL1Q5EBL4 403 aa16.6■□□□□ 0.25
TCOF1-202ENST00000377797 ANO1Q5XXA6 986 aa16.6■□□□□ 0.25
TCOF1-202ENST00000377797 DHX58Q96C10 678 aa16.6■□□□□ 0.25
TCOF1-202ENST00000377797 CDHR2Q9BYE9 1310 aa16.6■□□□□ 0.25
TCOF1-202ENST00000377797 CUL4AQ13619 759 aa16.6■□□□□ 0.25
TCOF1-202ENST00000377797 SLFNL1Q499Z3 407 aa16.6■□□□□ 0.25
TCOF1-202ENST00000377797 DEF6Q9H4E7 631 aa16.6■□□□□ 0.25
TCOF1-202ENST00000377797 NARFQ9UHQ1 456 aa16.6■□□□□ 0.25
TCOF1-202ENST00000377797 AMPD3Q01432 767 aa16.59■□□□□ 0.25
TCOF1-202ENST00000377797 ZNF654Q8IZM8 581 aa16.59■□□□□ 0.25
TCOF1-202ENST00000377797 MARCH10Q8NA82 808 aaPredicted RBP16.59■□□□□ 0.25
TCOF1-202ENST00000377797 COL15A1P39059 1388 aa16.59■□□□□ 0.25
TCOF1-202ENST00000377797 XDHP47989 1333 aa16.59■□□□□ 0.25
TCOF1-202ENST00000377797 GNA11P29992 359 aa16.59■□□□□ 0.25
TCOF1-202ENST00000377797 MCM7P33993 719 aa16.59■□□□□ 0.25
TCOF1-202ENST00000377797 MCAMP43121 646 aa16.59■□□□□ 0.25
TCOF1-202ENST00000377797 BAG6P46379 1132 aa16.59■□□□□ 0.25
TCOF1-202ENST00000377797 ZNF772Q68DY9 489 aaPredicted RBP16.59■□□□□ 0.25
TCOF1-202ENST00000377797 KRI1Q8N9T8 703 aaKnown RBP16.59■□□□□ 0.25
TCOF1-202ENST00000377797 TTF2Q9UNY4 1162 aaKnown RBP16.59■□□□□ 0.25
TCOF1-202ENST00000377797 hCG_1642624A0A1W2PR95 340 aa16.59■□□□□ 0.25
TCOF1-202ENST00000377797 ARPP21Q9UBL0 812 aaPredicted RBP16.59■□□□□ 0.25
TCOF1-202ENST00000377797 LEMD3Q9Y2U8 911 aa16.59■□□□□ 0.25
TCOF1-202ENST00000377797 JCADQ9P266 1359 aa16.59■□□□□ 0.25
TCOF1-202ENST00000377797 SPATA31A1Q5TZJ5 1347 aa16.59■□□□□ 0.25
TCOF1-202ENST00000377797 PPP2R5BQ15173 497 aa16.59■□□□□ 0.25
TCOF1-202ENST00000377797 PDIA3P30101 505 aaKnown RBP16.58■□□□□ 0.25
TCOF1-202ENST00000377797 FAM160A1Q05DH4 1040 aa16.58■□□□□ 0.25
TCOF1-202ENST00000377797 TTLL12Q14166 644 aaPredicted RBP16.58■□□□□ 0.25
TCOF1-202ENST00000377797 TMEM132AQ24JP5 1023 aa16.58■□□□□ 0.25
TCOF1-202ENST00000377797 LARGE2Q8N3Y3 721 aa16.58■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms