RNA–Protein interactions for RNA: ENST00000377670.8

HIF3A-205, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HIF3A, Length 5,852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-205ENST00000377670 ZKSCAN3Q9BRR0 538 aa12.27□□□□□ -0.44
HIF3A-205ENST00000377670 PTPDC1A2A3K4 754 aa12.27□□□□□ -0.44
HIF3A-205ENST00000377670 PHKG2P15735 406 aa12.27□□□□□ -0.44
HIF3A-205ENST00000377670 NOLC1Q14978 699 aaKnown RBP eCLIP12.27□□□□□ -0.44
HIF3A-205ENST00000377670 CLTCL1P53675 1640 aa12.27□□□□□ -0.45
HIF3A-205ENST00000377670 PRC1O43663 620 aa12.27□□□□□ -0.45
HIF3A-205ENST00000377670 IFFO1Q0D2I5 559 aa12.27□□□□□ -0.45
HIF3A-205ENST00000377670 APOBRQ0VD83 1088 aa12.27□□□□□ -0.45
HIF3A-205ENST00000377670 UVSSAQ2YD98 709 aa12.27□□□□□ -0.45
HIF3A-205ENST00000377670 USP26Q9BXU7 913 aa12.27□□□□□ -0.45
HIF3A-205ENST00000377670 USP44Q9H0E7 712 aa12.27□□□□□ -0.45
HIF3A-205ENST00000377670 SPON1Q9HCB6 807 aa12.27□□□□□ -0.45
HIF3A-205ENST00000377670 GCKRQ14397 625 aa12.27□□□□□ -0.45
HIF3A-205ENST00000377670 ZSWIM4Q9H7M6 989 aa12.27□□□□□ -0.45
HIF3A-205ENST00000377670 GOPCQ9HD26 462 aa12.27□□□□□ -0.45
HIF3A-205ENST00000377670 NLRP1Q9C000 1473 aa12.26□□□□□ -0.45
HIF3A-205ENST00000377670 POTEB2H3BUK9 544 aa12.26□□□□□ -0.45
HIF3A-205ENST00000377670 MNAT1P51948 309 aa12.26□□□□□ -0.45
HIF3A-205ENST00000377670 CREB3L3Q68CJ9 461 aa12.26□□□□□ -0.45
HIF3A-205ENST00000377670 LUZP1Q86V48 1076 aa12.26□□□□□ -0.45
HIF3A-205ENST00000377670 CCDC40Q4G0X9 1142 aa12.26□□□□□ -0.45
HIF3A-205ENST00000377670 TBC1D22AQ8WUA7 517 aa12.26□□□□□ -0.45
HIF3A-205ENST00000377670 NUP88Q99567 741 aaPredicted RBP12.26□□□□□ -0.45
HIF3A-205ENST00000377670 CTAGE5O15320 804 aa12.26□□□□□ -0.45
HIF3A-205ENST00000377670 TRIM6Q9C030 488 aaPredicted RBP12.26□□□□□ -0.45
HIF3A-205ENST00000377670 DDX19AQ9NUU7 478 aaKnown RBP12.26□□□□□ -0.45
HIF3A-205ENST00000377670 FSIP1Q8NA03 581 aa12.26□□□□□ -0.45
HIF3A-205ENST00000377670 STX1AQ16623 288 aa12.26□□□□□ -0.45
HIF3A-205ENST00000377670 CERS3Q8IU89 383 aa12.26□□□□□ -0.45
HIF3A-205ENST00000377670 RGS22Q8NE09 1264 aa12.26□□□□□ -0.45
HIF3A-205ENST00000377670 MACROD2A1Z1Q3 448 aa12.25□□□□□ -0.45
HIF3A-205ENST00000377670 TNNI3KQ59H18 835 aa12.25□□□□□ -0.45
HIF3A-205ENST00000377670 FPGT-TNNI3KV9GXZ4 949 aa12.25□□□□□ -0.45
HIF3A-205ENST00000377670 MYOM2P54296 1465 aa12.25□□□□□ -0.45
HIF3A-205ENST00000377670 GIMAP6Q6P9H5 292 aa12.25□□□□□ -0.45
HIF3A-205ENST00000377670 AZI2Q9H6S1 392 aa12.25□□□□□ -0.45
HIF3A-205ENST00000377670 PKD2L1Q9P0L9 805 aa12.25□□□□□ -0.45
HIF3A-205ENST00000377670 DPH6Q7L8W6 267 aa12.25□□□□□ -0.45
HIF3A-205ENST00000377670 CPXCR1Q8N123 301 aa12.25□□□□□ -0.45
HIF3A-205ENST00000377670 GRIPAP1Q4V328 841 aa12.25□□□□□ -0.45
HIF3A-205ENST00000377670 ASAP1Q9ULH1 1129 aa12.25□□□□□ -0.45
HIF3A-205ENST00000377670 RNF123Q5XPI4 1314 aa12.25□□□□□ -0.45
HIF3A-205ENST00000377670 PSDA5PKW4 1024 aaPredicted RBP12.24□□□□□ -0.45
HIF3A-205ENST00000377670 DNM1Q05193 864 aaKnown RBP12.24□□□□□ -0.45
HIF3A-205ENST00000377670 ZNF165P49910 485 aa12.24□□□□□ -0.45
HIF3A-205ENST00000377670 GTF2IP78347 998 aa12.24□□□□□ -0.45
HIF3A-205ENST00000377670 ARHGEF25Q86VW2 580 aa12.24□□□□□ -0.45
HIF3A-205ENST00000377670 MMRN2Q9H8L6 949 aa12.24□□□□□ -0.45
HIF3A-205ENST00000377670 USP6P35125 1406 aa12.24□□□□□ -0.45
HIF3A-205ENST00000377670 RNF113AO15541 343 aaKnown RBP12.24□□□□□ -0.45
HIF3A-205ENST00000377670 ZBTB7AO95365 584 aa12.24□□□□□ -0.45
HIF3A-205ENST00000377670 MYCLP12524 364 aaPredicted RBP12.24□□□□□ -0.45
HIF3A-205ENST00000377670 KRT13P13646 458 aa12.24□□□□□ -0.45
HIF3A-205ENST00000377670 C2orf69Q8N8R5 385 aa12.24□□□□□ -0.45
HIF3A-205ENST00000377670 TTC41PQ6P2S7 1318 aa12.24□□□□□ -0.45
HIF3A-205ENST00000377670 ADCY10Q96PN6 1610 aa12.24□□□□□ -0.45
HIF3A-205ENST00000377670 EYA2O00167 538 aa12.24□□□□□ -0.45
HIF3A-205ENST00000377670 NSMFQ6X4W1 530 aa12.24□□□□□ -0.45
HIF3A-205ENST00000377670 CCDC94Q9BW85 323 aaPredicted RBP12.24□□□□□ -0.45
HIF3A-205ENST00000377670 HMG20BQ9P0W2 317 aa12.24□□□□□ -0.45
HIF3A-205ENST00000377670 FAM135BQ49AJ0 1406 aa12.24□□□□□ -0.45
HIF3A-205ENST00000377670 ERVV-2B6SEH9 535 aa12.24□□□□□ -0.45
HIF3A-205ENST00000377670 SUPT20HL1Q3ZLR7 823 aa12.24□□□□□ -0.45
HIF3A-205ENST00000377670 TEKT1Q969V4 418 aa12.24□□□□□ -0.45
HIF3A-205ENST00000377670 IGSF3O75054 1194 aa12.23□□□□□ -0.45
HIF3A-205ENST00000377670 RTN1Q16799 776 aa12.23□□□□□ -0.45
HIF3A-205ENST00000377670 HSP90AA4PQ58FG1 418 aa12.23□□□□□ -0.45
HIF3A-205ENST00000377670 CTNNBL1Q8WYA6 563 aaPredicted RBP12.23□□□□□ -0.45
HIF3A-205ENST00000377670 INSRP06213 1382 aa12.23□□□□□ -0.45
HIF3A-205ENST00000377670 NEURL1BA8MQ27 555 aa12.23□□□□□ -0.45
HIF3A-205ENST00000377670 PARP1P09874 1014 aaKnown RBP12.23□□□□□ -0.45
HIF3A-205ENST00000377670 CCNA1P78396 465 aa12.23□□□□□ -0.45
HIF3A-205ENST00000377670 HACE1Q8IYU2 909 aa12.23□□□□□ -0.45
HIF3A-205ENST00000377670 XAGE2Q96GT9 111 aa12.23□□□□□ -0.45
HIF3A-205ENST00000377670 ZSCAN22P10073 491 aaPredicted RBP12.23□□□□□ -0.45
HIF3A-205ENST00000377670 PAFAH1B1P43034 410 aa12.23□□□□□ -0.45
HIF3A-205ENST00000377670 GNG11P61952 73 aa12.23□□□□□ -0.45
HIF3A-205ENST00000377670 UBE2HP62256 183 aa12.23□□□□□ -0.45
HIF3A-205ENST00000377670 PYM1Q9BRP8 204 aaKnown RBP12.23□□□□□ -0.45
HIF3A-205ENST00000377670 RSPH14Q9UHP6 348 aa12.23□□□□□ -0.45
HIF3A-205ENST00000377670 TTF2Q9UNY4 1162 aaKnown RBP12.23□□□□□ -0.45
HIF3A-205ENST00000377670 ZBTB43O43298 467 aa12.23□□□□□ -0.45
HIF3A-205ENST00000377670 PUM3Q15397 648 aaKnown RBP12.23□□□□□ -0.45
HIF3A-205ENST00000377670 GTPBP4Q9BZE4 634 aaKnown RBP12.23□□□□□ -0.45
HIF3A-205ENST00000377670 CCDC171Q6TFL3 1326 aa12.23□□□□□ -0.45
HIF3A-205ENST00000377670 TCP10L2B9ZVM9 353 aa12.22□□□□□ -0.45
HIF3A-205ENST00000377670 MARCKSP29966 332 aaPredicted RBP12.22□□□□□ -0.45
HIF3A-205ENST00000377670 DOK7Q18PE1 504 aa12.22□□□□□ -0.45
HIF3A-205ENST00000377670 CCDC93Q567U6 631 aa12.22□□□□□ -0.45
HIF3A-205ENST00000377670 CCDC91Q7Z6B0 441 aa12.22□□□□□ -0.45
HIF3A-205ENST00000377670 CNNM3Q8NE01 707 aa12.22□□□□□ -0.45
HIF3A-205ENST00000377670 NR1I2O75469 434 aa12.22□□□□□ -0.45
HIF3A-205ENST00000377670 YEATS4O95619 227 aa12.22□□□□□ -0.45
HIF3A-205ENST00000377670 ERFEQ4G0M1 354 aa12.22□□□□□ -0.45
HIF3A-205ENST00000377670 GPCPD1Q9NPB8 672 aa12.22□□□□□ -0.45
HIF3A-205ENST00000377670 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.22□□□□□ -0.45
HIF3A-205ENST00000377670 ZKSCAN5Q9Y2L8 839 aa12.22□□□□□ -0.45
HIF3A-205ENST00000377670 V9GYY5 206 aaPredicted RBP12.22□□□□□ -0.45
HIF3A-205ENST00000377670 GSPT1P15170 499 aaKnown RBP12.22□□□□□ -0.45
HIF3A-205ENST00000377670 OSBPP22059 807 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms