RNA–Protein interactions for RNA: ENST00000376899.8

YIF1A-202, Transcript of Yip1 interacting factor homolog A, membrane trafficking protein, humanhuman

TSL 2

Gene YIF1A, Length 1,042 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIF1A-202ENST00000376899 GOLIM4O00461 696 aa27.54■■■□□ 2
YIF1A-202ENST00000376899 IDH1O75874 414 aaKnown RBP27.54■■■□□ 2
YIF1A-202ENST00000376899 BTDP43251 543 aa27.54■■■□□ 2
YIF1A-202ENST00000376899 RFX7Q2KHR2 1363 aa27.54■■■□□ 2
YIF1A-202ENST00000376899 PI4K2BQ8TCG2 481 aa27.54■■■□□ 2
YIF1A-202ENST00000376899 LNPKQ9C0E8 428 aa27.54■■■□□ 2
YIF1A-202ENST00000376899 TMOD2Q9NZR1 351 aa27.54■■■□□ 2
YIF1A-202ENST00000376899 PAPPA2Q9BXP8 1791 aa27.53■■■□□ 2
YIF1A-202ENST00000376899 MAP3K12Q12852 859 aa27.53■■■□□ 2
YIF1A-202ENST00000376899 TSHZ3Q63HK5 1081 aa27.53■■■□□ 2
YIF1A-202ENST00000376899 B4GALNT3Q6L9W6 998 aa27.53■■■□□ 2
YIF1A-202ENST00000376899 CHD1LQ86WJ1 897 aa27.53■■■□□ 2
YIF1A-202ENST00000376899 EDC3Q96F86 508 aaKnown RBP27.53■■■□□ 2
YIF1A-202ENST00000376899 STAP2Q9UGK3 403 aa27.53■■■□□ 2
YIF1A-202ENST00000376899 CNTNAP1P78357 1384 aa27.52■■■□□ 2
YIF1A-202ENST00000376899 TNNI2P48788 182 aa27.52■■■□□ 2
YIF1A-202ENST00000376899 CACNB3P54284 484 aa27.52■■■□□ 2
YIF1A-202ENST00000376899 RASA3Q14644 834 aa27.52■■■□□ 2
YIF1A-202ENST00000376899 FAM83AQ86UY5 434 aa27.52■■■□□ 2
YIF1A-202ENST00000376899 ZNF408Q9H9D4 720 aa27.52■■■□□ 2
YIF1A-202ENST00000376899 USP40Q9NVE5 1235 aa27.52■■■□□ 2
YIF1A-202ENST00000376899 RPAP1Q9BWH6 1393 aaPredicted RBP27.51■■□□□ 1.99
YIF1A-202ENST00000376899 TCP10L2B9ZVM9 353 aa27.51■■□□□ 1.99
YIF1A-202ENST00000376899 ERC2O15083 957 aa27.51■■□□□ 1.99
YIF1A-202ENST00000376899 MAP4K4O95819 1239 aaPredicted RBP27.51■■□□□ 1.99
YIF1A-202ENST00000376899 HTRA3P83110 453 aa27.51■■□□□ 1.99
YIF1A-202ENST00000376899 PRAMEF18Q5VWM3 479 aa27.51■■□□□ 1.99
YIF1A-202ENST00000376899 SSC5DA1L4H1 1573 aa27.51■■□□□ 1.99
YIF1A-202ENST00000376899 GLRX3O76003 335 aaKnown RBP27.5■■□□□ 1.99
YIF1A-202ENST00000376899 RHBDL3P58872 404 aa27.5■■□□□ 1.99
YIF1A-202ENST00000376899 ADGRA1Q86SQ6 560 aa27.5■■□□□ 1.99
YIF1A-202ENST00000376899 TEPSINQ96N21 525 aa27.5■■□□□ 1.99
YIF1A-202ENST00000376899 IDI2Q9BXS1 227 aa27.5■■□□□ 1.99
YIF1A-202ENST00000376899 CDK5RAP2Q96SN8 1893 aa27.5■■□□□ 1.99
YIF1A-202ENST00000376899 FOCADQ5VW36 1801 aa27.49■■□□□ 1.99
YIF1A-202ENST00000376899 PDE1AP54750 535 aa27.49■■□□□ 1.99
YIF1A-202ENST00000376899 PPP4CP60510 307 aa27.49■■□□□ 1.99
YIF1A-202ENST00000376899 MAGEB6Q8N7X4 407 aa27.49■■□□□ 1.99
YIF1A-202ENST00000376899 GBA2Q9HCG7 927 aaPredicted RBP27.49■■□□□ 1.99
YIF1A-202ENST00000376899 TLL2Q9Y6L7 1015 aa27.49■■□□□ 1.99
YIF1A-202ENST00000376899 NEFLP07196 543 aa27.48■■□□□ 1.99
YIF1A-202ENST00000376899 CYP7A1P22680 504 aa27.48■■□□□ 1.99
YIF1A-202ENST00000376899 WDHD1O75717 1129 aaPredicted RBP27.47■■□□□ 1.99
YIF1A-202ENST00000376899 PDE6AP16499 860 aa27.47■■□□□ 1.99
YIF1A-202ENST00000376899 NF2P35240 595 aa27.47■■□□□ 1.99
YIF1A-202ENST00000376899 FKBP1BP68106 108 aa27.47■■□□□ 1.99
YIF1A-202ENST00000376899 NFIAQ12857 509 aa27.47■■□□□ 1.99
YIF1A-202ENST00000376899 TMEM39BQ9GZU3 492 aa27.47■■□□□ 1.99
YIF1A-202ENST00000376899 FAM198AQ9UFP1 575 aa27.47■■□□□ 1.99
YIF1A-202ENST00000376899 BAG3O95817 575 aa27.46■■□□□ 1.99
YIF1A-202ENST00000376899 SAPCD2Q86UD0 394 aa27.46■■□□□ 1.99
YIF1A-202ENST00000376899 C2orf69Q8N8R5 385 aa27.46■■□□□ 1.99
YIF1A-202ENST00000376899 FAM151AQ8WW52 585 aa27.46■■□□□ 1.99
YIF1A-202ENST00000376899 NOL10Q9BSC4 688 aaKnown RBP27.46■■□□□ 1.99
YIF1A-202ENST00000376899 TCRBV5S4A2TA0A5A2 114 aa27.45■■□□□ 1.98
YIF1A-202ENST00000376899 RASSF10A6NK89 507 aa27.45■■□□□ 1.98
YIF1A-202ENST00000376899 NPM3O75607 178 aaKnown RBP27.45■■□□□ 1.98
YIF1A-202ENST00000376899 PLCG2P16885 1265 aa27.45■■□□□ 1.98
YIF1A-202ENST00000376899 SUPT20HL1Q3ZLR7 823 aa27.45■■□□□ 1.98
YIF1A-202ENST00000376899 NBPF12Q5TAG4 269 aaPredicted RBP27.45■■□□□ 1.98
YIF1A-202ENST00000376899 SLC9C2Q5TAH2 1124 aa27.45■■□□□ 1.98
YIF1A-202ENST00000376899 KBTBD3Q8NAB2 608 aa27.45■■□□□ 1.98
YIF1A-202ENST00000376899 AATFQ9NY61 560 aaKnown RBP eCLIP27.45■■□□□ 1.98
YIF1A-202ENST00000376899 ABT1Q9ULW3 272 aaKnown RBP27.45■■□□□ 1.98
YIF1A-202ENST00000376899 ENTPD3O75355 529 aa27.44■■□□□ 1.98
YIF1A-202ENST00000376899 ADD2P35612 726 aa27.44■■□□□ 1.98
YIF1A-202ENST00000376899 CERS3Q8IU89 383 aa27.44■■□□□ 1.98
YIF1A-202ENST00000376899 CDAN1Q8IWY9 1227 aa27.44■■□□□ 1.98
YIF1A-202ENST00000376899 HHIPL1Q96JK4 782 aa27.44■■□□□ 1.98
YIF1A-202ENST00000376899 DDX24Q9GZR7 859 aaKnown RBP eCLIP27.44■■□□□ 1.98
YIF1A-202ENST00000376899 OSBPL3Q9H4L5 887 aa27.44■■□□□ 1.98
YIF1A-202ENST00000376899 RGS3P49796 1198 aa27.43■■□□□ 1.98
YIF1A-202ENST00000376899 PLEKHM2Q8IWE5 1019 aa27.43■■□□□ 1.98
YIF1A-202ENST00000376899 DNAJC5GQ8N7S2 189 aa27.43■■□□□ 1.98
YIF1A-202ENST00000376899 SH3RF3Q8TEJ3 882 aaPredicted RBP27.43■■□□□ 1.98
YIF1A-202ENST00000376899 DDX4Q9NQI0 724 aaKnown RBP27.43■■□□□ 1.98
YIF1A-202ENST00000376899 COL2A1P02458 1487 aaPredicted RBP27.43■■□□□ 1.98
YIF1A-202ENST00000376899 ZNF532Q9HCE3 1301 aa27.42■■□□□ 1.98
YIF1A-202ENST00000376899 TEX11Q8IYF3 940 aa27.42■■□□□ 1.98
YIF1A-202ENST00000376899 AK9Q5TCS8 1911 aa27.41■■□□□ 1.98
YIF1A-202ENST00000376899 TCP10Q12799 353 aa27.41■■□□□ 1.98
YIF1A-202ENST00000376899 UBE3CQ15386 1083 aa27.41■■□□□ 1.98
YIF1A-202ENST00000376899 MAP3K11Q16584 847 aa27.41■■□□□ 1.98
YIF1A-202ENST00000376899 ZSCAN25Q6NSZ9 544 aa27.41■■□□□ 1.98
YIF1A-202ENST00000376899 DYNLL1P63167 89 aaKnown RBP27.4■■□□□ 1.98
YIF1A-202ENST00000376899 ZFPM1Q8IX07 1006 aa27.4■■□□□ 1.98
YIF1A-202ENST00000376899 MIGA1Q8NAN2 632 aa27.4■■□□□ 1.98
YIF1A-202ENST00000376899 RIOK1Q9BRS2 568 aaKnown RBP27.4■■□□□ 1.98
YIF1A-202ENST00000376899 ATRNL1Q5VV63 1379 aa27.39■■□□□ 1.98
YIF1A-202ENST00000376899 OTOFQ9HC10 1997 aa27.39■■□□□ 1.98
YIF1A-202ENST00000376899 PDE4AP27815 886 aa27.39■■□□□ 1.98
YIF1A-202ENST00000376899 HUNKP57058 714 aa27.39■■□□□ 1.98
YIF1A-202ENST00000376899 DEFB115Q30KQ5 88 aa27.39■■□□□ 1.98
YIF1A-202ENST00000376899 MOB2Q70IA6 237 aa27.39■■□□□ 1.98
YIF1A-202ENST00000376899 PICALMQ13492 652 aa27.38■■□□□ 1.97
YIF1A-202ENST00000376899 CENPQQ7L2Z9 268 aaPredicted RBP27.38■■□□□ 1.97
YIF1A-202ENST00000376899 ARMC9Q7Z3E5 817 aa27.38■■□□□ 1.97
YIF1A-202ENST00000376899 KLRG1Q96E93 195 aa27.38■■□□□ 1.97
YIF1A-202ENST00000376899 HOOK2Q96ED9 719 aa27.38■■□□□ 1.97
YIF1A-202ENST00000376899 MKRN1Q9UHC7 482 aaKnown RBP27.38■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms