RNA–Protein interactions for RNA: ENST00000376709.8

VSX1-202, Transcript of visual system homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSX1, Length 2,192 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-202ENST00000376709 ABCF2Q9UG63 623 aa23.62■■□□□ 1.37
VSX1-202ENST00000376709 SLC4A4Q9Y6R1 1079 aa23.62■■□□□ 1.37
VSX1-202ENST00000376709 C4AP0C0L4 1744 aa23.62■■□□□ 1.37
VSX1-202ENST00000376709 C4BP0C0L5 1744 aa23.62■■□□□ 1.37
VSX1-202ENST00000376709 COL24A1Q17RW2 1714 aa23.62■■□□□ 1.37
VSX1-202ENST00000376709 UBE4AQ14139 1066 aa23.62■■□□□ 1.37
VSX1-202ENST00000376709 OTUD7BQ6GQQ9 843 aa23.62■■□□□ 1.37
VSX1-202ENST00000376709 NFXL1Q6ZNB6 911 aa23.62■■□□□ 1.37
VSX1-202ENST00000376709 PNPLA7Q6ZV29 1317 aa23.62■■□□□ 1.37
VSX1-202ENST00000376709 ILDR1Q86SU0 546 aaPredicted RBP23.62■■□□□ 1.37
VSX1-202ENST00000376709 VPS37DQ86XT2 251 aa23.62■■□□□ 1.37
VSX1-202ENST00000376709 MIGA1Q8NAN2 632 aa23.62■■□□□ 1.37
VSX1-202ENST00000376709 ZNF804BA4D1E1 1349 aa23.61■■□□□ 1.37
VSX1-202ENST00000376709 PRKAB2O43741 272 aa23.61■■□□□ 1.37
VSX1-202ENST00000376709 CAVIN4Q5BKX8 364 aa23.61■■□□□ 1.37
VSX1-202ENST00000376709 APOA5Q6Q788 366 aa23.61■■□□□ 1.37
VSX1-202ENST00000376709 AEBP2Q6ZN18 517 aaPredicted RBP23.61■■□□□ 1.37
VSX1-202ENST00000376709 FBXO18Q8NFZ0 1043 aa23.61■■□□□ 1.37
VSX1-202ENST00000376709 CELF1Q92879 486 aaKnown RBP23.61■■□□□ 1.37
VSX1-202ENST00000376709 CNNM2Q9H8M5 875 aa23.61■■□□□ 1.37
VSX1-202ENST00000376709 QTRT2Q9H974 415 aaKnown RBP23.61■■□□□ 1.37
VSX1-202ENST00000376709 INCENPQ9NQS7 918 aa23.61■■□□□ 1.37
VSX1-202ENST00000376709 WTIPA6NIX2 430 aaPredicted RBP23.61■■□□□ 1.37
VSX1-202ENST00000376709 TYRO3Q06418 890 aa23.61■■□□□ 1.37
VSX1-202ENST00000376709 NAP1L5Q96NT1 182 aaPredicted RBP23.61■■□□□ 1.37
VSX1-202ENST00000376709 EIF2AK3Q9NZJ5 1116 aaKnown RBP23.61■■□□□ 1.37
VSX1-202ENST00000376709 CDKL5O76039 1030 aa23.6■■□□□ 1.37
VSX1-202ENST00000376709 TMEM67Q5HYA8 995 aa23.6■■□□□ 1.37
VSX1-202ENST00000376709 FAM196AQ6ZSG2 479 aa23.6■■□□□ 1.37
VSX1-202ENST00000376709 MFSD6Q6ZSS7 791 aa23.6■■□□□ 1.37
VSX1-202ENST00000376709 MICU3Q86XE3 530 aa23.6■■□□□ 1.37
VSX1-202ENST00000376709 LRRC4BQ9NT99 713 aa23.6■■□□□ 1.37
VSX1-202ENST00000376709 MINPP1Q9UNW1 487 aa23.6■■□□□ 1.37
VSX1-202ENST00000376709 KDM4AO75164 1064 aa23.59■■□□□ 1.37
VSX1-202ENST00000376709 ADCY5O95622 1261 aa23.59■■□□□ 1.37
VSX1-202ENST00000376709 RXRAP19793 462 aa23.59■■□□□ 1.37
VSX1-202ENST00000376709 CYP7A1P22680 504 aa23.59■■□□□ 1.37
VSX1-202ENST00000376709 AKNAD1Q5T1N1 836 aa23.59■■□□□ 1.37
VSX1-202ENST00000376709 CPLX2Q6PUV4 134 aaKnown RBP23.59■■□□□ 1.37
VSX1-202ENST00000376709 IGDCC4Q8TDY8 1250 aa23.59■■□□□ 1.37
VSX1-202ENST00000376709 KRT23Q9C075 422 aa23.59■■□□□ 1.37
VSX1-202ENST00000376709 BCL11BQ9C0K0 894 aaPredicted RBP23.59■■□□□ 1.37
VSX1-202ENST00000376709 RAI14Q9P0K7 980 aa23.59■■□□□ 1.37
VSX1-202ENST00000376709 RFC4P35249 363 aa23.59■■□□□ 1.37
VSX1-202ENST00000376709 ME1P48163 572 aa23.59■■□□□ 1.37
VSX1-202ENST00000376709 PLCB2Q00722 1185 aa23.59■■□□□ 1.37
VSX1-202ENST00000376709 ZSWIM5Q9P217 1185 aa23.59■■□□□ 1.37
VSX1-202ENST00000376709 ZBTB43O43298 467 aa23.58■■□□□ 1.37
VSX1-202ENST00000376709 RBM43Q6ZSC3 357 aaKnown RBP23.58■■□□□ 1.37
VSX1-202ENST00000376709 CCAR1Q8IX12 1150 aaKnown RBP23.58■■□□□ 1.37
VSX1-202ENST00000376709 NLRP3Q96P20 1036 aa23.58■■□□□ 1.37
VSX1-202ENST00000376709 LY9Q9HBG7 655 aa23.58■■□□□ 1.37
VSX1-202ENST00000376709 SENP2Q9HC62 589 aa23.58■■□□□ 1.37
VSX1-202ENST00000376709 TOMM22Q9NS69 142 aa23.58■■□□□ 1.37
VSX1-202ENST00000376709 ZKSCAN5Q9Y2L8 839 aa23.58■■□□□ 1.37
VSX1-202ENST00000376709 TIAM2Q8IVF5 1701 aa23.58■■□□□ 1.37
VSX1-202ENST00000376709 IFIT3O14879 490 aaKnown RBP23.58■■□□□ 1.36
VSX1-202ENST00000376709 TRAPPC3LQ5T215 181 aa23.58■■□□□ 1.36
VSX1-202ENST00000376709 FAM200AQ8TCP9 573 aa23.58■■□□□ 1.36
VSX1-202ENST00000376709 MRVI1Q9Y6F6 885 aa23.58■■□□□ 1.36
VSX1-202ENST00000376709 POLR3DP05423 398 aaPredicted RBP23.57■■□□□ 1.36
VSX1-202ENST00000376709 RRP12Q5JTH9 1297 aaKnown RBP23.57■■□□□ 1.36
VSX1-202ENST00000376709 TPTE2Q6XPS3 522 aa23.57■■□□□ 1.36
VSX1-202ENST00000376709 CCDC73Q6ZRK6 1079 aa23.57■■□□□ 1.36
VSX1-202ENST00000376709 SGMS1Q86VZ5 419 aa23.57■■□□□ 1.36
VSX1-202ENST00000376709 CCDC144CPQ8IYA2 1237 aa23.57■■□□□ 1.36
VSX1-202ENST00000376709 SASS6Q6UVJ0 657 aa23.57■■□□□ 1.36
VSX1-202ENST00000376709 BRAPQ7Z569 592 aa23.57■■□□□ 1.36
VSX1-202ENST00000376709 GJB4Q9NTQ9 266 aa23.57■■□□□ 1.36
VSX1-202ENST00000376709 CCDC69A6NI79 296 aa23.56■■□□□ 1.36
VSX1-202ENST00000376709 LIFRP42702 1097 aa23.56■■□□□ 1.36
VSX1-202ENST00000376709 ADGRA1Q86SQ6 560 aa23.56■■□□□ 1.36
VSX1-202ENST00000376709 STAG1Q8WVM7 1258 aa23.56■■□□□ 1.36
VSX1-202ENST00000376709 SLC12A7Q9Y666 1083 aa23.56■■□□□ 1.36
VSX1-202ENST00000376709 GOLGA8AA7E2F4 631 aa23.55■■□□□ 1.36
VSX1-202ENST00000376709 CDC27P30260 824 aa23.55■■□□□ 1.36
VSX1-202ENST00000376709 RPS8P62241 208 aaKnown RBP23.55■■□□□ 1.36
VSX1-202ENST00000376709 RTEL1Q9NZ71 1219 aa23.55■■□□□ 1.36
VSX1-202ENST00000376709 COL1A1P02452 1464 aaPredicted RBP23.55■■□□□ 1.36
VSX1-202ENST00000376709 MAGEB6P1A0A0J9YX57 407 aa23.55■■□□□ 1.36
VSX1-202ENST00000376709 SART3Q15020 963 aaKnown RBP23.55■■□□□ 1.36
VSX1-202ENST00000376709 ANO6Q4KMQ2 910 aa23.55■■□□□ 1.36
VSX1-202ENST00000376709 ALG1Q9BT22 464 aa23.55■■□□□ 1.36
VSX1-202ENST00000376709 MYL10Q9BUA6 226 aa23.55■■□□□ 1.36
VSX1-202ENST00000376709 NPHP1O15259 732 aa23.54■■□□□ 1.36
VSX1-202ENST00000376709 STK11IPQ8N1F8 1099 aa23.54■■□□□ 1.36
VSX1-202ENST00000376709 PHKBQ93100 1093 aa23.54■■□□□ 1.36
VSX1-202ENST00000376709 FAM84BQ96KN1 310 aaPredicted RBP23.54■■□□□ 1.36
VSX1-202ENST00000376709 TACC3Q9Y6A5 838 aa23.54■■□□□ 1.36
VSX1-202ENST00000376709 SF3A1Q15459 793 aaKnown RBP23.54■■□□□ 1.36
VSX1-202ENST00000376709 SYNE3Q6ZMZ3 975 aa23.54■■□□□ 1.36
VSX1-202ENST00000376709 SDR42E1Q8WUS8 393 aa23.54■■□□□ 1.36
VSX1-202ENST00000376709 GOLPH3LQ9H4A5 285 aa23.54■■□□□ 1.36
VSX1-202ENST00000376709 RNF41Q9H4P4 317 aaPredicted RBP23.54■■□□□ 1.36
VSX1-202ENST00000376709 STK38Q15208 465 aa23.53■■□□□ 1.36
VSX1-202ENST00000376709 MYSM1Q5VVJ2 828 aa23.53■■□□□ 1.36
VSX1-202ENST00000376709 TAOK2Q9UL54 1235 aa23.53■■□□□ 1.36
VSX1-202ENST00000376709 KINO60870 393 aaKnown RBP23.52■■□□□ 1.36
VSX1-202ENST00000376709 IARSP41252 1262 aaKnown RBP23.52■■□□□ 1.36
VSX1-202ENST00000376709 KIF23Q02241 960 aaPredicted RBP23.52■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms