RNA–Protein interactions for RNA: ENST00000376387.4

TM9SF2-201, Transcript of transmembrane 9 superfamily member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2-201ENST00000376387 IKBKBO14920 756 aa13.23□□□□□ -0.29
TM9SF2-201ENST00000376387 FOXN1O15353 648 aa13.23□□□□□ -0.29
TM9SF2-201ENST00000376387 FOXP2O15409 715 aa13.23□□□□□ -0.29
TM9SF2-201ENST00000376387 ADKP55263 362 aaKnown RBP13.23□□□□□ -0.29
TM9SF2-201ENST00000376387 SHC4Q6S5L8 630 aa13.23□□□□□ -0.29
TM9SF2-201ENST00000376387 DESI2Q9BSY9 194 aa13.23□□□□□ -0.29
TM9SF2-201ENST00000376387 DENND2AQ9ULE3 1009 aa13.23□□□□□ -0.29
TM9SF2-201ENST00000376387 USP54Q70EL1 1684 aa13.23□□□□□ -0.29
TM9SF2-201ENST00000376387 H3BQF6 201 aa13.23□□□□□ -0.29
TM9SF2-201ENST00000376387 TOP1P11387 765 aaKnown RBP13.23□□□□□ -0.29
TM9SF2-201ENST00000376387 CMA1P23946 247 aa13.23□□□□□ -0.29
TM9SF2-201ENST00000376387 KIF23Q02241 960 aaPredicted RBP13.23□□□□□ -0.29
TM9SF2-201ENST00000376387 PSME1Q06323 249 aa13.23□□□□□ -0.29
TM9SF2-201ENST00000376387 HELLSQ9NRZ9 838 aa13.23□□□□□ -0.29
TM9SF2-201ENST00000376387 A0A0U1RQJ8 604 aa13.23□□□□□ -0.29
TM9SF2-201ENST00000376387 GOLGA8BA8MQT2 603 aa13.23□□□□□ -0.29
TM9SF2-201ENST00000376387 BMP6P22004 513 aa13.23□□□□□ -0.29
TM9SF2-201ENST00000376387 SYKP43405 635 aa13.23□□□□□ -0.29
TM9SF2-201ENST00000376387 MAP3K9P80192 1104 aa13.23□□□□□ -0.29
TM9SF2-201ENST00000376387 PPP2R3AQ06190 1150 aa13.23□□□□□ -0.29
TM9SF2-201ENST00000376387 LMBR1LQ6UX01 489 aa13.23□□□□□ -0.29
TM9SF2-201ENST00000376387 SYNE3Q6ZMZ3 975 aa13.23□□□□□ -0.29
TM9SF2-201ENST00000376387 PDILTQ8N807 584 aa13.23□□□□□ -0.29
TM9SF2-201ENST00000376387 ATRIPQ8WXE1 791 aa13.23□□□□□ -0.29
TM9SF2-201ENST00000376387 STK24Q9Y6E0 443 aa13.23□□□□□ -0.29
TM9SF2-201ENST00000376387 TRIM66O15016 1216 aa13.22□□□□□ -0.29
TM9SF2-201ENST00000376387 CASQ1P31415 396 aa13.22□□□□□ -0.29
TM9SF2-201ENST00000376387 MYL5Q02045 173 aa13.22□□□□□ -0.29
TM9SF2-201ENST00000376387 AMOTQ4VCS5 1084 aa13.22□□□□□ -0.29
TM9SF2-201ENST00000376387 ANKRD13DQ6ZTN6 518 aa13.22□□□□□ -0.29
TM9SF2-201ENST00000376387 OSBP2Q969R2 916 aa13.22□□□□□ -0.29
TM9SF2-201ENST00000376387 DHX58Q96C10 678 aa13.22□□□□□ -0.29
TM9SF2-201ENST00000376387 FUT8Q9BYC5 575 aa13.22□□□□□ -0.29
TM9SF2-201ENST00000376387 TUBE1Q9UJT0 475 aa13.22□□□□□ -0.29
TM9SF2-201ENST00000376387 NWD2Q9ULI1 1742 aa13.22□□□□□ -0.29
TM9SF2-201ENST00000376387 A0A087WZG4 1122 aa13.22□□□□□ -0.29
TM9SF2-201ENST00000376387 TUBB4AP04350 444 aa13.22□□□□□ -0.29
TM9SF2-201ENST00000376387 KARSQ15046 597 aaKnown RBP13.22□□□□□ -0.29
TM9SF2-201ENST00000376387 RABL6Q3YEC7 729 aaPredicted RBP13.22□□□□□ -0.29
TM9SF2-201ENST00000376387 ZNF790Q6PG37 636 aa13.22□□□□□ -0.29
TM9SF2-201ENST00000376387 KIFC2Q96AC6 838 aa13.22□□□□□ -0.29
TM9SF2-201ENST00000376387 MRFAP1Q9Y605 127 aa13.22□□□□□ -0.29
TM9SF2-201ENST00000376387 SIPA1L3O60292 1781 aaPredicted RBP13.22□□□□□ -0.29
TM9SF2-201ENST00000376387 RXRAP19793 462 aa13.22□□□□□ -0.29
TM9SF2-201ENST00000376387 SLC20A2Q08357 652 aa13.22□□□□□ -0.29
TM9SF2-201ENST00000376387 MTF1Q14872 753 aa13.22□□□□□ -0.29
TM9SF2-201ENST00000376387 SPECC1Q5M775 1068 aa13.22□□□□□ -0.29
TM9SF2-201ENST00000376387 RSRC2Q7L4I2 434 aaKnown RBP13.22□□□□□ -0.29
TM9SF2-201ENST00000376387 ATG9AQ7Z3C6 839 aa13.22□□□□□ -0.29
TM9SF2-201ENST00000376387 METTL16Q86W50 562 aaKnown RBP13.22□□□□□ -0.29
TM9SF2-201ENST00000376387 PHF8Q9UPP1 1060 aa13.22□□□□□ -0.29
TM9SF2-201ENST00000376387 AFDNP55196 1824 aaKnown RBP13.21□□□□□ -0.29
TM9SF2-201ENST00000376387 PRC1O43663 620 aa13.21□□□□□ -0.29
TM9SF2-201ENST00000376387 ANTXR2P58335 489 aa13.21□□□□□ -0.29
TM9SF2-201ENST00000376387 LONRF3Q496Y0 759 aa13.21□□□□□ -0.29
TM9SF2-201ENST00000376387 LRP10Q7Z4F1 713 aa13.21□□□□□ -0.29
TM9SF2-201ENST00000376387 ZNF594Q96JF6 807 aaPredicted RBP13.21□□□□□ -0.29
TM9SF2-201ENST00000376387 SRRTQ9BXP5 876 aaKnown RBP13.21□□□□□ -0.29
TM9SF2-201ENST00000376387 AXIN2Q9Y2T1 843 aa13.21□□□□□ -0.29
TM9SF2-201ENST00000376387 UBE2Q2LH0YL09 131 aa13.21□□□□□ -0.3
TM9SF2-201ENST00000376387 CCP110O43303 1012 aa13.21□□□□□ -0.3
TM9SF2-201ENST00000376387 TXLNBQ8N3L3 684 aa13.21□□□□□ -0.3
TM9SF2-201ENST00000376387 ZSCAN26Q16670 478 aa13.2□□□□□ -0.3
TM9SF2-201ENST00000376387 LRRC24Q50LG9 513 aa13.2□□□□□ -0.3
TM9SF2-201ENST00000376387 ZNF496Q96IT1 587 aaPredicted RBP13.2□□□□□ -0.3
TM9SF2-201ENST00000376387 BAG1Q99933 345 aaPredicted RBP13.2□□□□□ -0.3
TM9SF2-201ENST00000376387 RNF113AO15541 343 aaKnown RBP13.2□□□□□ -0.3
TM9SF2-201ENST00000376387 ZSCAN12O43309 604 aa13.2□□□□□ -0.3
TM9SF2-201ENST00000376387 TFRCP02786 760 aaKnown RBP13.2□□□□□ -0.3
TM9SF2-201ENST00000376387 SLC39A14Q15043 492 aa13.2□□□□□ -0.3
TM9SF2-201ENST00000376387 GPR161Q8N6U8 529 aaKnown RBP13.2□□□□□ -0.3
TM9SF2-201ENST00000376387 CCDC191Q8NCU4 936 aa13.2□□□□□ -0.3
TM9SF2-201ENST00000376387 ANKRD24Q8TF21 1146 aa13.2□□□□□ -0.3
TM9SF2-201ENST00000376387 HPSEQ9Y251 543 aa13.2□□□□□ -0.3
TM9SF2-201ENST00000376387 TC2NQ8N9U0 490 aa13.2□□□□□ -0.3
TM9SF2-201ENST00000376387 MRPL44Q9H9J2 332 aaKnown RBP13.2□□□□□ -0.3
TM9SF2-201ENST00000376387 ARHGAP6O43182 974 aa13.19□□□□□ -0.3
TM9SF2-201ENST00000376387 CASP7P55210 303 aa13.19□□□□□ -0.3
TM9SF2-201ENST00000376387 TBX2Q13207 712 aaPredicted RBP13.19□□□□□ -0.3
TM9SF2-201ENST00000376387 DNAJC14Q6Y2X3 702 aaPredicted RBP13.19□□□□□ -0.3
TM9SF2-201ENST00000376387 BRAPQ7Z569 592 aa13.19□□□□□ -0.3
TM9SF2-201ENST00000376387 TRMT44Q8IYL2 757 aaKnown RBP13.19□□□□□ -0.3
TM9SF2-201ENST00000376387 RNF217Q8TC41 542 aa13.19□□□□□ -0.3
TM9SF2-201ENST00000376387 ARFGAP3Q9NP61 516 aa13.19□□□□□ -0.3
TM9SF2-201ENST00000376387 ADAM21Q9UKJ8 722 aa13.19□□□□□ -0.3
TM9SF2-201ENST00000376387 PCDHA5Q9Y5H7 936 aa13.19□□□□□ -0.3
TM9SF2-201ENST00000376387 MAFGO15525 162 aa13.19□□□□□ -0.3
TM9SF2-201ENST00000376387 CBFA2T2O43439 604 aa13.19□□□□□ -0.3
TM9SF2-201ENST00000376387 LMAN1P49257 510 aa13.19□□□□□ -0.3
TM9SF2-201ENST00000376387 FKBP4Q02790 459 aaKnown RBP eCLIP13.19□□□□□ -0.3
TM9SF2-201ENST00000376387 FMR1Q06787 632 aaKnown RBP eCLIP13.19□□□□□ -0.3
TM9SF2-201ENST00000376387 ZNF827Q17R98 1081 aa13.19□□□□□ -0.3
TM9SF2-201ENST00000376387 LONRF2Q1L5Z9 754 aa13.19□□□□□ -0.3
TM9SF2-201ENST00000376387 C10orf67Q8IYJ2 551 aa13.19□□□□□ -0.3
TM9SF2-201ENST00000376387 MPHOSPH8Q99549 860 aa13.19□□□□□ -0.3
TM9SF2-201ENST00000376387 CPLX1O14810 134 aa13.19□□□□□ -0.3
TM9SF2-201ENST00000376387 IFIT1P09914 478 aaKnown RBP13.19□□□□□ -0.3
TM9SF2-201ENST00000376387 FOXO4P98177 505 aa13.19□□□□□ -0.3
TM9SF2-201ENST00000376387 PTPAQ15257 358 aa13.19□□□□□ -0.3
TM9SF2-201ENST00000376387 MUM1L1Q5H9M0 696 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms