RNA–Protein interactions for RNA: ENST00000375639.6

C6orf48-204, Transcript of chromosome 6 open reading frame 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C6orf48, Length 712 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C6orf48-204ENST00000375639 SLC34A2O95436 690 aa21.38■■□□□ 1.01
C6orf48-204ENST00000375639 ZFYP08048 801 aaPredicted RBP21.38■■□□□ 1.01
C6orf48-204ENST00000375639 SPDYE6P0CI01 402 aa21.38■■□□□ 1.01
C6orf48-204ENST00000375639 HSPA1AP0DMV8 641 aaKnown RBP21.38■■□□□ 1.01
C6orf48-204ENST00000375639 HSPA1BP0DMV9 641 aaKnown RBP21.38■■□□□ 1.01
C6orf48-204ENST00000375639 HIRAP54198 1017 aaPredicted RBP21.38■■□□□ 1.01
C6orf48-204ENST00000375639 UBE3CQ15386 1083 aa21.38■■□□□ 1.01
C6orf48-204ENST00000375639 NBPF9Q3BBW0 867 aa21.38■■□□□ 1.01
C6orf48-204ENST00000375639 BMP2KLQ5H9B9 411 aa21.38■■□□□ 1.01
C6orf48-204ENST00000375639 TMED8Q6PL24 325 aaPredicted RBP21.38■■□□□ 1.01
C6orf48-204ENST00000375639 ADGRA1Q86SQ6 560 aa21.38■■□□□ 1.01
C6orf48-204ENST00000375639 PNMA8AQ86V59 439 aaPredicted RBP21.38■■□□□ 1.01
C6orf48-204ENST00000375639 TCRBV5S4A2TA0A5A2 114 aa21.37■■□□□ 1.01
C6orf48-204ENST00000375639 BTDP43251 543 aa21.37■■□□□ 1.01
C6orf48-204ENST00000375639 APOBEC3HQ6NTF7 200 aaKnown RBP21.37■■□□□ 1.01
C6orf48-204ENST00000375639 MIGA1Q8NAN2 632 aa21.37■■□□□ 1.01
C6orf48-204ENST00000375639 ZBED3Q96IU2 234 aaPredicted RBP21.37■■□□□ 1.01
C6orf48-204ENST00000375639 ADAMTSL1Q8N6G6 1762 aa21.37■■□□□ 1.01
C6orf48-204ENST00000375639 MYH7P12883 1935 aa21.36■■□□□ 1.01
C6orf48-204ENST00000375639 AK9Q5TCS8 1911 aa21.36■■□□□ 1.01
C6orf48-204ENST00000375639 GPR75-ASB3A0A0A6YYF3 556 aa21.36■■□□□ 1.01
C6orf48-204ENST00000375639 MYO1BO43795 1136 aa21.36■■□□□ 1.01
C6orf48-204ENST00000375639 BAG3O95817 575 aa21.36■■□□□ 1.01
C6orf48-204ENST00000375639 TDRD3Q9H7E2 651 aaKnown RBP21.36■■□□□ 1.01
C6orf48-204ENST00000375639 AATFQ9NY61 560 aaKnown RBP eCLIP21.36■■□□□ 1.012e-51■■■■■ 66.5
C6orf48-204ENST00000375639 CLEC11AQ9Y240 323 aa21.36■■□□□ 1.01
C6orf48-204ENST00000375639 DYNLL1P63167 89 aaKnown RBP21.35■■□□□ 1.01
C6orf48-204ENST00000375639 SMC1BQ8NDV3 1235 aa21.35■■□□□ 1.01
C6orf48-204ENST00000375639 APPBP2Q92624 585 aa21.35■■□□□ 1.01
C6orf48-204ENST00000375639 USP40Q9NVE5 1235 aa21.35■■□□□ 1.01
C6orf48-204ENST00000375639 ASTN2O75129 1339 aaPredicted RBP21.34■■□□□ 1.01
C6orf48-204ENST00000375639 MAGEB6P1A0A0J9YX57 407 aa21.34■■□□□ 1.01
C6orf48-204ENST00000375639 CLRN2A0PK11 232 aa21.34■■□□□ 1.01
C6orf48-204ENST00000375639 CDC42EP5Q6NZY7 148 aa21.34■■□□□ 1.01
C6orf48-204ENST00000375639 TICAM2Q86XR7 235 aa21.34■■□□□ 1.01
C6orf48-204ENST00000375639 DIAPH3Q9NSV4 1193 aa21.34■■□□□ 1.01
C6orf48-204ENST00000375639 RFX7Q2KHR2 1363 aa21.34■■□□□ 1.01
C6orf48-204ENST00000375639 HIP1O00291 1037 aa21.33■■□□□ 1.01
C6orf48-204ENST00000375639 PPP4CP60510 307 aa21.33■■□□□ 1.01
C6orf48-204ENST00000375639 ZMYM1Q5SVZ6 1142 aa21.33■■□□□ 1.01
C6orf48-204ENST00000375639 PUS7LQ9H0K6 701 aaKnown RBP21.33■■□□□ 1.01
C6orf48-204ENST00000375639 TMOD2Q9NZR1 351 aa21.33■■□□□ 1.01
C6orf48-204ENST00000375639 ZNF70Q9UC06 446 aaPredicted RBP21.33■■□□□ 1.01
C6orf48-204ENST00000375639 MBD4O95243 580 aa21.32■■□□□ 1
C6orf48-204ENST00000375639 POTEIP0CG38 1075 aa21.32■■□□□ 1
C6orf48-204ENST00000375639 POTEJP0CG39 1038 aa21.32■■□□□ 1
C6orf48-204ENST00000375639 NMIQ13287 307 aaPredicted RBP21.32■■□□□ 1
C6orf48-204ENST00000375639 SPDYE2Q495Y8 402 aa21.32■■□□□ 1
C6orf48-204ENST00000375639 ANGEL2Q5VTE6 544 aaKnown RBP21.32■■□□□ 1
C6orf48-204ENST00000375639 OSBP2Q969R2 916 aa21.32■■□□□ 1
C6orf48-204ENST00000375639 AIDAQ96BJ3 306 aa21.32■■□□□ 1
C6orf48-204ENST00000375639 SEC62Q99442 399 aaKnown RBP21.32■■□□□ 1
C6orf48-204ENST00000375639 VEZTQ9HBM0 779 aa21.32■■□□□ 1
C6orf48-204ENST00000375639 GGA3Q9NZ52 723 aa21.32■■□□□ 1
C6orf48-204ENST00000375639 PLCG2P16885 1265 aa21.31■■□□□ 1
C6orf48-204ENST00000375639 CACNB3P54284 484 aa21.31■■□□□ 1
C6orf48-204ENST00000375639 SH3RF3Q8TEJ3 882 aaPredicted RBP21.31■■□□□ 1
C6orf48-204ENST00000375639 ZC3H15Q8WU90 426 aaKnown RBP21.31■■□□□ 1
C6orf48-204ENST00000375639 FAM227BQ96M60 508 aa21.31■■□□□ 1
C6orf48-204ENST00000375639 RIOK1Q9BRS2 568 aaKnown RBP21.31■■□□□ 1
C6orf48-204ENST00000375639 ARMT1Q9H993 441 aa21.31■■□□□ 1
C6orf48-204ENST00000375639 A0A0D9SFI3 127 aa21.3■■□□□ 1
C6orf48-204ENST00000375639 M0R2C6 588 aa21.3■■□□□ 1
C6orf48-204ENST00000375639 RHBDL3P58872 404 aa21.3■■□□□ 1
C6orf48-204ENST00000375639 CWC27Q6UX04 472 aaKnown RBP21.3■■□□□ 1
C6orf48-204ENST00000375639 LDHDQ86WU2 507 aa21.3■■□□□ 1
C6orf48-204ENST00000375639 CERS3Q8IU89 383 aa21.3■■□□□ 1
C6orf48-204ENST00000375639 TEX11Q8IYF3 940 aa21.3■■□□□ 1
C6orf48-204ENST00000375639 LCORLQ8N3X6 602 aa21.3■■□□□ 1
C6orf48-204ENST00000375639 DCPSQ96C86 337 aaKnown RBP21.3■■□□□ 1
C6orf48-204ENST00000375639 HELLSQ9NRZ9 838 aa21.3■■□□□ 1
C6orf48-204ENST00000375639 TCP10L2B9ZVM9 353 aa21.29■■□□□ 1
C6orf48-204ENST00000375639 CHMLP26374 656 aa21.29■■□□□ 1
C6orf48-204ENST00000375639 SCAF8Q9UPN6 1271 aaKnown RBP21.29■■□□□ 1
C6orf48-204ENST00000375639 GPAA1O43292 621 aa21.28■■□□□ 1
C6orf48-204ENST00000375639 MCMDC2Q4G0Z9 681 aa21.28■■□□□ 1
C6orf48-204ENST00000375639 APOBEC3FQ8IUX4 373 aaKnown RBP21.28■■□□□ 1
C6orf48-204ENST00000375639 CRNKL1Q9BZJ0 848 aaKnown RBP21.28■■□□□ 1
C6orf48-204ENST00000375639 PGAP2Q9UHJ9 254 aa21.28■■□□□ 1
C6orf48-204ENST00000375639 CDC45O75419 566 aa21.27■■□□□ 1
C6orf48-204ENST00000375639 USP5P45974 858 aa21.27■■□□□ 1
C6orf48-204ENST00000375639 NFIAQ12857 509 aa21.27■■□□□ 1
C6orf48-204ENST00000375639 PICALMQ13492 652 aa21.27■■□□□ 1
C6orf48-204ENST00000375639 MAP1SQ66K74 1059 aaPredicted RBP21.27■■□□□ 1
C6orf48-204ENST00000375639 CCDC129Q6ZRS4 1044 aa21.27■■□□□ 1
C6orf48-204ENST00000375639 STRBPQ96SI9 672 aaKnown RBP21.27■■□□□ 1
C6orf48-204ENST00000375639 ECM29Q5VYK3 1845 aa21.27■□□□□ 0.99
C6orf48-204ENST00000375639 PITPNM2Q9BZ72 1349 aa21.27■□□□□ 0.99
C6orf48-204ENST00000375639 WDHD1O75717 1129 aaPredicted RBP21.26■□□□□ 0.99
C6orf48-204ENST00000375639 TNNI2P48788 182 aa21.26■□□□□ 0.99
C6orf48-204ENST00000375639 TCP10Q12799 353 aa21.26■□□□□ 0.99
C6orf48-204ENST00000375639 TNFAIP1Q13829 316 aa21.26■□□□□ 0.99
C6orf48-204ENST00000375639 SULF1Q8IWU6 871 aa21.26■□□□□ 0.99
C6orf48-204ENST00000375639 TGFBRAP1Q8WUH2 860 aa21.26■□□□□ 0.99
C6orf48-204ENST00000375639 RUFY2Q8WXA3 655 aa21.26■□□□□ 0.99
C6orf48-204ENST00000375639 IDI2Q9BXS1 227 aa21.26■□□□□ 0.99
C6orf48-204ENST00000375639 PRKAB2O43741 272 aa21.25■□□□□ 0.99
C6orf48-204ENST00000375639 FKBP1CQ5VVH2 108 aa21.25■□□□□ 0.99
C6orf48-204ENST00000375639 CASC1Q6TDU7 716 aa21.25■□□□□ 0.99
C6orf48-204ENST00000375639 KRT26Q7Z3Y9 468 aa21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms