RNA–Protein interactions for RNA: ENST00000375218.3

UBR4-201, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 4,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-201ENST00000375218 FAM81BQ96LP2 452 aa10.49□□□□□ -0.73
UBR4-201ENST00000375218 CDK19Q9BWU1 502 aa10.49□□□□□ -0.73
UBR4-201ENST00000375218 BRINP2Q9C0B6 783 aa10.49□□□□□ -0.73
UBR4-201ENST00000375218 CDKN1CP49918 316 aaPredicted RBP10.48□□□□□ -0.73
UBR4-201ENST00000375218 TMF1P82094 1093 aa10.48□□□□□ -0.73
UBR4-201ENST00000375218 TAF1CQ15572 869 aaPredicted RBP10.48□□□□□ -0.73
UBR4-201ENST00000375218 IL31Q6EBC2 164 aa10.48□□□□□ -0.73
UBR4-201ENST00000375218 B4GALNT3Q6L9W6 998 aa10.48□□□□□ -0.73
UBR4-201ENST00000375218 TDRD7Q8NHU6 1098 aaKnown RBP10.48□□□□□ -0.73
UBR4-201ENST00000375218 N4BP2L2Q92802 583 aaPredicted RBP10.48□□□□□ -0.73
UBR4-201ENST00000375218 DONSONQ9NYP3 566 aa10.48□□□□□ -0.73
UBR4-201ENST00000375218 LINC00854A0A1B0GVQ3 168 aa10.48□□□□□ -0.73
UBR4-201ENST00000375218 CSPG5O95196 566 aa10.48□□□□□ -0.73
UBR4-201ENST00000375218 IL33O95760 270 aa10.48□□□□□ -0.73
UBR4-201ENST00000375218 CCSAPQ6IQ19 270 aaPredicted RBP10.48□□□□□ -0.73
UBR4-201ENST00000375218 C17orf50Q8WW18 174 aa10.48□□□□□ -0.73
UBR4-201ENST00000375218 TEKT1Q969V4 418 aa10.48□□□□□ -0.73
UBR4-201ENST00000375218 MRS2Q9HD23 443 aa10.48□□□□□ -0.73
UBR4-201ENST00000375218 ERAP2Q6P179 960 aa10.48□□□□□ -0.73
UBR4-201ENST00000375218 SAPCD2Q86UD0 394 aa10.48□□□□□ -0.73
UBR4-201ENST00000375218 NOB1Q9ULX3 412 aaKnown RBP10.48□□□□□ -0.73
UBR4-201ENST00000375218 LILRB3O75022 631 aa10.47□□□□□ -0.73
UBR4-201ENST00000375218 KCNA6P17658 529 aa10.47□□□□□ -0.73
UBR4-201ENST00000375218 HPDP32754 393 aaPredicted RBP10.47□□□□□ -0.73
UBR4-201ENST00000375218 CHMP4BP1P59074 171 aa10.47□□□□□ -0.73
UBR4-201ENST00000375218 SAMD3Q8N6K7 520 aa10.47□□□□□ -0.73
UBR4-201ENST00000375218 RPGRQ92834 1020 aaKnown RBP10.47□□□□□ -0.73
UBR4-201ENST00000375218 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.47□□□□□ -0.733e-14■■■□□ 16.9
UBR4-201ENST00000375218 EFCC1Q9HA90 598 aa10.47□□□□□ -0.73
UBR4-201ENST00000375218 CABP1Q9NZU7 370 aa10.47□□□□□ -0.73
UBR4-201ENST00000375218 FBXO2Q9UK22 296 aaPredicted RBP10.47□□□□□ -0.73
UBR4-201ENST00000375218 ZMIZ1Q9ULJ6 1067 aa10.47□□□□□ -0.73
UBR4-201ENST00000375218 TSPAN6O43657 245 aa10.47□□□□□ -0.73
UBR4-201ENST00000375218 SMARCA1P28370 1054 aa10.47□□□□□ -0.73
UBR4-201ENST00000375218 STIP1P31948 543 aaKnown RBP10.47□□□□□ -0.73
UBR4-201ENST00000375218 C20orf194Q5TEA3 1177 aa10.47□□□□□ -0.73
UBR4-201ENST00000375218 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.47□□□□□ -0.73
UBR4-201ENST00000375218 APPL2Q8NEU8 664 aa10.47□□□□□ -0.73
UBR4-201ENST00000375218 HVCN1Q96D96 273 aa10.47□□□□□ -0.73
UBR4-201ENST00000375218 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.47□□□□□ -0.73
UBR4-201ENST00000375218 DCAF16Q9NXF7 216 aa10.47□□□□□ -0.73
UBR4-201ENST00000375218 INPP5FQ9Y2H2 1132 aa10.47□□□□□ -0.73
UBR4-201ENST00000375218 IL16Q14005 1332 aa10.47□□□□□ -0.73
UBR4-201ENST00000375218 C19orf81C9J6K1 198 aa10.47□□□□□ -0.73
UBR4-201ENST00000375218 MAP3K7O43318 606 aa10.47□□□□□ -0.73
UBR4-201ENST00000375218 PRPHP41219 470 aa10.47□□□□□ -0.73
UBR4-201ENST00000375218 AMOTQ4VCS5 1084 aa10.47□□□□□ -0.73
UBR4-201ENST00000375218 LSM14AQ8ND56 463 aaKnown RBP10.47□□□□□ -0.73
UBR4-201ENST00000375218 KTN1Q86UP2 1357 aaKnown RBP10.47□□□□□ -0.73
UBR4-201ENST00000375218 USP6P35125 1406 aa10.46□□□□□ -0.73
UBR4-201ENST00000375218 NEK3P51956 506 aa10.46□□□□□ -0.73
UBR4-201ENST00000375218 FAM117BQ6P1L5 589 aa10.46□□□□□ -0.73
UBR4-201ENST00000375218 MNS1Q8NEH6 495 aa10.46□□□□□ -0.73
UBR4-201ENST00000375218 ZNF496Q96IT1 587 aaPredicted RBP10.46□□□□□ -0.73
UBR4-201ENST00000375218 SRPK1Q96SB4 655 aaKnown RBP10.46□□□□□ -0.73
UBR4-201ENST00000375218 BEGAINQ9BUH8 593 aa10.46□□□□□ -0.73
UBR4-201ENST00000375218 CCDC163A0A0D9SF12 145 aa10.46□□□□□ -0.73
UBR4-201ENST00000375218 SNX2O60749 519 aa10.46□□□□□ -0.73
UBR4-201ENST00000375218 IFIT2P09913 472 aaKnown RBP10.46□□□□□ -0.73
UBR4-201ENST00000375218 RASA3Q14644 834 aa10.46□□□□□ -0.73
UBR4-201ENST00000375218 PARP10Q53GL7 1025 aa10.46□□□□□ -0.73
UBR4-201ENST00000375218 CTR9Q6PD62 1173 aa10.46□□□□□ -0.73
UBR4-201ENST00000375218 TMC1Q8TDI8 760 aa10.46□□□□□ -0.73
UBR4-201ENST00000375218 AP1M1Q9BXS5 423 aa10.46□□□□□ -0.73
UBR4-201ENST00000375218 TMEM238LA0A1B0GVL6 79 aa10.46□□□□□ -0.74
UBR4-201ENST00000375218 COL6A1P12109 1028 aa10.46□□□□□ -0.74
UBR4-201ENST00000375218 CFAP58Q5T655 872 aa10.46□□□□□ -0.74
UBR4-201ENST00000375218 MORC1Q86VD1 984 aa10.46□□□□□ -0.74
UBR4-201ENST00000375218 N4BP2Q86UW6 1770 aaPredicted RBP10.46□□□□□ -0.74
UBR4-201ENST00000375218 CPXCR1Q8N123 301 aa10.45□□□□□ -0.74
UBR4-201ENST00000375218 RNPC3Q96LT9 517 aaKnown RBP10.45□□□□□ -0.74
UBR4-201ENST00000375218 UBAP1Q9NZ09 502 aa10.45□□□□□ -0.74
UBR4-201ENST00000375218 SLAIN2Q9P270 581 aa10.45□□□□□ -0.74
UBR4-201ENST00000375218 H3BRB1 525 aa10.45□□□□□ -0.74
UBR4-201ENST00000375218 TRIM37O94972 964 aa10.45□□□□□ -0.74
UBR4-201ENST00000375218 CNGA1P29973 690 aa10.45□□□□□ -0.74
UBR4-201ENST00000375218 TUT1Q9H6E5 874 aaKnown RBP10.45□□□□□ -0.74
UBR4-201ENST00000375218 C6orf203Q9P0P8 240 aaPredicted RBP10.45□□□□□ -0.74
UBR4-201ENST00000375218 PPP2R3BQ9Y5P8 575 aa10.45□□□□□ -0.74
UBR4-201ENST00000375218 BRCA2P51587 3418 aa10.45□□□□□ -0.74
UBR4-201ENST00000375218 INHBEP58166 350 aa10.45□□□□□ -0.74
UBR4-201ENST00000375218 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.45□□□□□ -0.74
UBR4-201ENST00000375218 WDR66Q8TBY9 1149 aa10.45□□□□□ -0.74
UBR4-201ENST00000375218 TMX1Q9H3N1 280 aa10.45□□□□□ -0.74
UBR4-201ENST00000375218 CFAP45Q9UL16 551 aa10.45□□□□□ -0.74
UBR4-201ENST00000375218 TMEM127O75204 238 aa10.44□□□□□ -0.74
UBR4-201ENST00000375218 ALDH1L1O75891 902 aa10.44□□□□□ -0.74
UBR4-201ENST00000375218 ARID5AQ03989 594 aa10.44□□□□□ -0.74
UBR4-201ENST00000375218 MTMR3Q13615 1198 aa10.44□□□□□ -0.74
UBR4-201ENST00000375218 PPHLN1Q8NEY8 458 aaKnown RBP10.44□□□□□ -0.74
UBR4-201ENST00000375218 UIMC1Q96RL1 719 aa10.44□□□□□ -0.74
UBR4-201ENST00000375218 TSPYL2Q9H2G4 693 aaPredicted RBP10.44□□□□□ -0.74
UBR4-201ENST00000375218 TNNQ9UQP3 1299 aa10.44□□□□□ -0.74
UBR4-201ENST00000375218 GNL2Q13823 731 aaKnown RBP10.44□□□□□ -0.74
UBR4-201ENST00000375218 TSHZ3Q63HK5 1081 aa10.44□□□□□ -0.74
UBR4-201ENST00000375218 OTUD6AQ7L8S5 288 aa10.44□□□□□ -0.74
UBR4-201ENST00000375218 TSPYL1Q9H0U9 437 aa10.44□□□□□ -0.74
UBR4-201ENST00000375218 SCHIP1Q9P0W5 487 aaPredicted RBP10.44□□□□□ -0.74
UBR4-201ENST00000375218 SLIT3O75094 1523 aa10.44□□□□□ -0.74
UBR4-201ENST00000375218 USP31Q70CQ4 1352 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms