RNA–Protein interactions for RNA: ENST00000375023.3

NOTCH4-201, Transcript of notch 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH4, Length 6,745 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4-201ENST00000375023 PPANQ9NQ55 473 aaKnown RBP16.57■□□□□ 0.24
NOTCH4-201ENST00000375023 AATFQ9NY61 560 aaKnown RBP eCLIP16.57■□□□□ 0.24
NOTCH4-201ENST00000375023 FAM169AQ9Y6X4 670 aa16.57■□□□□ 0.24
NOTCH4-201ENST00000375023 SCAF11Q99590 1463 aaKnown RBP16.57■□□□□ 0.24
NOTCH4-201ENST00000375023 PRXQ9BXM0 1461 aa16.57■□□□□ 0.24
NOTCH4-201ENST00000375023 CTDSPL2Q05D32 466 aa16.56■□□□□ 0.24
NOTCH4-201ENST00000375023 OTUD7BQ6GQQ9 843 aa16.56■□□□□ 0.24
NOTCH4-201ENST00000375023 HSPA4P34932 840 aa16.56■□□□□ 0.24
NOTCH4-201ENST00000375023 TEX11Q8IYF3 940 aa16.56■□□□□ 0.24
NOTCH4-201ENST00000375023 ARFGAP3Q9NP61 516 aa16.56■□□□□ 0.24
NOTCH4-201ENST00000375023 MAP7D1Q3KQU3 841 aa16.56■□□□□ 0.24
NOTCH4-201ENST00000375023 C14orf93Q9H972 538 aaKnown RBP16.56■□□□□ 0.24
NOTCH4-201ENST00000375023 TPD52P55327 224 aaPredicted RBP16.56■□□□□ 0.24
NOTCH4-201ENST00000375023 LEO1Q8WVC0 666 aaPredicted RBP16.56■□□□□ 0.24
NOTCH4-201ENST00000375023 LRRC45Q96CN5 670 aa16.56■□□□□ 0.24
NOTCH4-201ENST00000375023 CPXCR1Q8N123 301 aa16.56■□□□□ 0.24
NOTCH4-201ENST00000375023 PAXBP1Q9Y5B6 917 aa16.56■□□□□ 0.24
NOTCH4-201ENST00000375023 Q3C1V9 767 aa16.56■□□□□ 0.24
NOTCH4-201ENST00000375023 RLBP1P12271 317 aa16.55■□□□□ 0.24
NOTCH4-201ENST00000375023 GNAQP50148 359 aa16.55■□□□□ 0.24
NOTCH4-201ENST00000375023 PSMB7Q99436 277 aa16.55■□□□□ 0.24
NOTCH4-201ENST00000375023 TRAF5O00463 557 aa16.55■□□□□ 0.24
NOTCH4-201ENST00000375023 TTLL3Q9Y4R7 772 aa16.55■□□□□ 0.24
NOTCH4-201ENST00000375023 HS2ST1Q7LGA3 356 aa16.55■□□□□ 0.24
NOTCH4-201ENST00000375023 CEP57Q86XR8 500 aa16.55■□□□□ 0.24
NOTCH4-201ENST00000375023 WDR7Q9Y4E6 1490 aa16.55■□□□□ 0.24
NOTCH4-201ENST00000375023 CCDC171Q6TFL3 1326 aa16.55■□□□□ 0.24
NOTCH4-201ENST00000375023 RTL9Q8NET4 1388 aa16.55■□□□□ 0.24
NOTCH4-201ENST00000375023 NOP56O00567 594 aaKnown RBP16.55■□□□□ 0.24
NOTCH4-201ENST00000375023 TXKP42681 527 aa16.55■□□□□ 0.24
NOTCH4-201ENST00000375023 TRIM31Q9BZY9 425 aa16.55■□□□□ 0.24
NOTCH4-201ENST00000375023 ANKRD44Q8N8A2 993 aa16.55■□□□□ 0.24
NOTCH4-201ENST00000375023 IQGAP2Q13576 1575 aa16.55■□□□□ 0.24
NOTCH4-201ENST00000375023 NCAPH2Q6IBW4 605 aa16.54■□□□□ 0.24
NOTCH4-201ENST00000375023 RUFY3Q7L099 469 aa16.54■□□□□ 0.24
NOTCH4-201ENST00000375023 G2E3Q7L622 706 aa16.54■□□□□ 0.24
NOTCH4-201ENST00000375023 SMC1BQ8NDV3 1235 aa16.54■□□□□ 0.24
NOTCH4-201ENST00000375023 SEC62Q99442 399 aaKnown RBP16.54■□□□□ 0.24
NOTCH4-201ENST00000375023 USTQ9Y2C2 406 aa16.54■□□□□ 0.24
NOTCH4-201ENST00000375023 FAM173BQ6P4H8 233 aa16.54■□□□□ 0.24
NOTCH4-201ENST00000375023 KIFC2Q96AC6 838 aa16.54■□□□□ 0.24
NOTCH4-201ENST00000375023 FNBP1Q96RU3 617 aa16.54■□□□□ 0.24
NOTCH4-201ENST00000375023 STK24Q9Y6E0 443 aa16.54■□□□□ 0.24
NOTCH4-201ENST00000375023 HPDP32754 393 aaPredicted RBP16.54■□□□□ 0.24
NOTCH4-201ENST00000375023 CEP85Q6P2H3 762 aa16.54■□□□□ 0.24
NOTCH4-201ENST00000375023 PHACTR3Q96KR7 559 aa16.54■□□□□ 0.24
NOTCH4-201ENST00000375023 QTRT2Q9H974 415 aaKnown RBP16.54■□□□□ 0.24
NOTCH4-201ENST00000375023 DNAJC5BQ9UF47 199 aa16.54■□□□□ 0.24
NOTCH4-201ENST00000375023 SEC24BO95487 1268 aa16.53■□□□□ 0.24
NOTCH4-201ENST00000375023 ITGA6P23229 1130 aa16.53■□□□□ 0.24
NOTCH4-201ENST00000375023 OTUD7AQ8TE49 926 aaPredicted RBP16.53■□□□□ 0.24
NOTCH4-201ENST00000375023 PFDN4Q9NQP4 134 aa16.53■□□□□ 0.24
NOTCH4-201ENST00000375023 NIM1KQ8IY84 436 aa16.53■□□□□ 0.24
NOTCH4-201ENST00000375023 NBPF3Q9H094 633 aa16.53■□□□□ 0.24
NOTCH4-201ENST00000375023 CFAP157Q5JU67 520 aa16.53■□□□□ 0.24
NOTCH4-201ENST00000375023 DYMQ7RTS9 669 aa16.53■□□□□ 0.24
NOTCH4-201ENST00000375023 PPP4R4Q6NUP7 873 aa16.53■□□□□ 0.24
NOTCH4-201ENST00000375023 CCDC87Q9NVE4 849 aa16.53■□□□□ 0.24
NOTCH4-201ENST00000375023 TRIM37O94972 964 aa16.52■□□□□ 0.24
NOTCH4-201ENST00000375023 BEND3Q5T5X7 828 aa16.52■□□□□ 0.24
NOTCH4-201ENST00000375023 FRMD4BQ9Y2L6 1034 aa16.52■□□□□ 0.24
NOTCH4-201ENST00000375023 H7C1D1 291 aa16.52■□□□□ 0.24
NOTCH4-201ENST00000375023 RXRBP28702 533 aa16.52■□□□□ 0.24
NOTCH4-201ENST00000375023 UVSSAQ2YD98 709 aa16.52■□□□□ 0.24
NOTCH4-201ENST00000375023 STAMQ92783 540 aa16.52■□□□□ 0.24
NOTCH4-201ENST00000375023 NSRP1Q9H0G5 558 aaKnown RBP16.52■□□□□ 0.24
NOTCH4-201ENST00000375023 E7EVH7 732 aa16.52■□□□□ 0.24
NOTCH4-201ENST00000375023 CAPN2P17655 700 aa16.52■□□□□ 0.24
NOTCH4-201ENST00000375023 CNBD1Q8NA66 436 aa16.52■□□□□ 0.24
NOTCH4-201ENST00000375023 GOLGA1Q92805 767 aa16.52■□□□□ 0.24
NOTCH4-201ENST00000375023 IRAK4Q9NWZ3 460 aa16.52■□□□□ 0.24
NOTCH4-201ENST00000375023 KRT86O43790 486 aa16.52■□□□□ 0.23
NOTCH4-201ENST00000375023 ZWINTO95229 277 aa16.52■□□□□ 0.23
NOTCH4-201ENST00000375023 FNDC3AQ9Y2H6 1198 aaKnown RBP16.52■□□□□ 0.23
NOTCH4-201ENST00000375023 TNRQ92752 1358 aa16.52■□□□□ 0.23
NOTCH4-201ENST00000375023 FANCAO15360 1455 aa16.52■□□□□ 0.23
NOTCH4-201ENST00000375023 CRCPO75575 148 aa16.52■□□□□ 0.23
NOTCH4-201ENST00000375023 PDE4DQ08499 809 aa16.52■□□□□ 0.23
NOTCH4-201ENST00000375023 NOC4LQ9BVI4 516 aaKnown RBP16.52■□□□□ 0.23
NOTCH4-201ENST00000375023 SNX16P57768 344 aa16.52■□□□□ 0.23
NOTCH4-201ENST00000375023 PTPROQ16827 1216 aa16.52■□□□□ 0.23
NOTCH4-201ENST00000375023 SPATA24Q86W54 205 aa16.51■□□□□ 0.23
NOTCH4-201ENST00000375023 DCPSQ96C86 337 aaKnown RBP16.51■□□□□ 0.23
NOTCH4-201ENST00000375023 NCOA1Q15788 1441 aa16.51■□□□□ 0.23
NOTCH4-201ENST00000375023 SV2BQ7L1I2 683 aa16.51■□□□□ 0.23
NOTCH4-201ENST00000375023 CMTR1Q8N1G2 835 aaKnown RBP16.51■□□□□ 0.23
NOTCH4-201ENST00000375023 PHKBQ93100 1093 aa16.51■□□□□ 0.23
NOTCH4-201ENST00000375023 SMC6Q96SB8 1091 aa16.51■□□□□ 0.23
NOTCH4-201ENST00000375023 CCDC77Q9BR77 488 aa16.51■□□□□ 0.23
NOTCH4-201ENST00000375023 ATP2A1O14983 1001 aa16.51■□□□□ 0.23
NOTCH4-201ENST00000375023 DAPK3O43293 454 aa16.51■□□□□ 0.23
NOTCH4-201ENST00000375023 KRT19P08727 400 aa16.51■□□□□ 0.23
NOTCH4-201ENST00000375023 CPLX4Q7Z7G2 160 aa16.51■□□□□ 0.23
NOTCH4-201ENST00000375023 IRX3P78415 501 aaPredicted RBP16.51■□□□□ 0.23
NOTCH4-201ENST00000375023 CCDC122Q5T0U0 273 aa16.51■□□□□ 0.23
NOTCH4-201ENST00000375023 NPHP3Q7Z494 1330 aa16.51■□□□□ 0.23
NOTCH4-201ENST00000375023 XRCC6P12956 609 aaKnown RBP eCLIP16.5■□□□□ 0.23
NOTCH4-201ENST00000375023 CALML3P27482 149 aa16.5■□□□□ 0.23
NOTCH4-201ENST00000375023 BRDTQ58F21 947 aaPredicted RBP16.5■□□□□ 0.23
NOTCH4-201ENST00000375023 UTP14CQ5TAP6 766 aaKnown RBP16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms