RNA–Protein interactions for RNA: ENST00000374943.8

HLA-DQB1-201, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-201ENST00000374943 FAM184AQ8NB25 1140 aa21.17■□□□□ 0.98
HLA-DQB1-201ENST00000374943 ZNF384Q8TF68 577 aa21.17■□□□□ 0.98
HLA-DQB1-201ENST00000374943 GPHNQ9NQX3 736 aaPredicted RBP21.17■□□□□ 0.98
HLA-DQB1-201ENST00000374943 BRPF3Q9ULD4 1205 aa21.17■□□□□ 0.98
HLA-DQB1-201ENST00000374943 ANGEL1Q9UNK9 670 aaKnown RBP21.17■□□□□ 0.98
HLA-DQB1-201ENST00000374943 KLF18A0A0U1RQI7 1052 aa21.16■□□□□ 0.98
HLA-DQB1-201ENST00000374943 SH2B2O14492 632 aaPredicted RBP21.16■□□□□ 0.98
HLA-DQB1-201ENST00000374943 MRE11P49959 708 aa21.16■□□□□ 0.98
HLA-DQB1-201ENST00000374943 CCT2P78371 535 aaKnown RBP21.16■□□□□ 0.98
HLA-DQB1-201ENST00000374943 ZNF827Q17R98 1081 aa21.16■□□□□ 0.98
HLA-DQB1-201ENST00000374943 ZSCAN23Q3MJ62 389 aa21.16■□□□□ 0.98
HLA-DQB1-201ENST00000374943 AKNAD1Q5T1N1 836 aa21.16■□□□□ 0.98
HLA-DQB1-201ENST00000374943 CYB5R4Q7L1T6 521 aa21.16■□□□□ 0.98
HLA-DQB1-201ENST00000374943 NSUN4Q96CB9 384 aaKnown RBP21.16■□□□□ 0.98
HLA-DQB1-201ENST00000374943 KRT23Q9C075 422 aa21.16■□□□□ 0.98
HLA-DQB1-201ENST00000374943 GDPD2Q9HCC8 539 aa21.16■□□□□ 0.98
HLA-DQB1-201ENST00000374943 ANKIB1Q9P2G1 1089 aa21.16■□□□□ 0.98
HLA-DQB1-201ENST00000374943 HPS5Q9UPZ3 1129 aa21.16■□□□□ 0.98
HLA-DQB1-201ENST00000374943 DLEC1Q9Y238 1755 aa21.16■□□□□ 0.98
HLA-DQB1-201ENST00000374943 DHX16O60231 1041 aaKnown RBP21.15■□□□□ 0.98
HLA-DQB1-201ENST00000374943 DNM1Q05193 864 aaKnown RBP21.15■□□□□ 0.98
HLA-DQB1-201ENST00000374943 TXNRD3Q86VQ6 643 aa21.15■□□□□ 0.98
HLA-DQB1-201ENST00000374943 CRAMP1Q96RY5 1269 aa21.15■□□□□ 0.98
HLA-DQB1-201ENST00000374943 MTA3Q9BTC8 594 aa21.15■□□□□ 0.98
HLA-DQB1-201ENST00000374943 NCOA5Q9HCD5 579 aaKnown RBP21.15■□□□□ 0.98
HLA-DQB1-201ENST00000374943 ANAPC4Q9UJX5 808 aa21.15■□□□□ 0.98
HLA-DQB1-201ENST00000374943 NSFL1CQ9UNZ2 370 aaKnown RBP21.15■□□□□ 0.98
HLA-DQB1-201ENST00000374943 MYH2Q9UKX2 1941 aa21.15■□□□□ 0.98
HLA-DQB1-201ENST00000374943 QSER1Q2KHR3 1735 aa21.15■□□□□ 0.98
HLA-DQB1-201ENST00000374943 GOLGA8BA8MQT2 603 aa21.15■□□□□ 0.98
HLA-DQB1-201ENST00000374943 B4E1Z4 1266 aa21.15■□□□□ 0.98
HLA-DQB1-201ENST00000374943 SF3B2Q13435 895 aaKnown RBP21.15■□□□□ 0.98
HLA-DQB1-201ENST00000374943 GIMAP6Q6P9H5 292 aa21.15■□□□□ 0.98
HLA-DQB1-201ENST00000374943 FLAD1Q8NFF5 587 aa21.15■□□□□ 0.98
HLA-DQB1-201ENST00000374943 BRIP1Q9BX63 1249 aa21.15■□□□□ 0.98
HLA-DQB1-201ENST00000374943 BBOX1O75936 387 aa21.14■□□□□ 0.97
HLA-DQB1-201ENST00000374943 APBA3O96018 575 aa21.14■□□□□ 0.97
HLA-DQB1-201ENST00000374943 UBE2HP62256 183 aa21.14■□□□□ 0.97
HLA-DQB1-201ENST00000374943 SPTY2D1Q68D10 685 aaPredicted RBP21.14■□□□□ 0.97
HLA-DQB1-201ENST00000374943 DDX11Q96FC9 970 aa21.14■□□□□ 0.97
HLA-DQB1-201ENST00000374943 RNF41Q9H4P4 317 aaPredicted RBP21.14■□□□□ 0.97
HLA-DQB1-201ENST00000374943 TMEM63CQ9P1W3 806 aa21.14■□□□□ 0.97
HLA-DQB1-201ENST00000374943 COL11A2P13942 1736 aaPredicted RBP21.13■□□□□ 0.97
HLA-DQB1-201ENST00000374943 ELP1O95163 1332 aa21.13■□□□□ 0.97
HLA-DQB1-201ENST00000374943 GADD45BO75293 160 aaPredicted RBP21.13■□□□□ 0.97
HLA-DQB1-201ENST00000374943 KRT85P78386 507 aa21.13■□□□□ 0.97
HLA-DQB1-201ENST00000374943 MECOMQ03112 1051 aa21.13■□□□□ 0.97
HLA-DQB1-201ENST00000374943 CTDSPL2Q05D32 466 aa21.13■□□□□ 0.97
HLA-DQB1-201ENST00000374943 RESTQ13127 1097 aa21.13■□□□□ 0.97
HLA-DQB1-201ENST00000374943 MFSD6Q6ZSS7 791 aa21.13■□□□□ 0.97
HLA-DQB1-201ENST00000374943 TMC4Q7Z404 712 aa21.13■□□□□ 0.97
HLA-DQB1-201ENST00000374943 SGMS1Q86VZ5 419 aa21.13■□□□□ 0.97
HLA-DQB1-201ENST00000374943 GAS2L3Q86XJ1 694 aa21.13■□□□□ 0.97
HLA-DQB1-201ENST00000374943 NLGN1Q8N2Q7 840 aa21.13■□□□□ 0.97
HLA-DQB1-201ENST00000374943 RGS22Q8NE09 1264 aa21.13■□□□□ 0.97
HLA-DQB1-201ENST00000374943 TDRD7Q8NHU6 1098 aaKnown RBP21.13■□□□□ 0.97
HLA-DQB1-201ENST00000374943 NKX2-3Q8TAU0 364 aa21.13■□□□□ 0.97
HLA-DQB1-201ENST00000374943 ZSCAN16Q9H4T2 348 aaPredicted RBP21.13■□□□□ 0.97
HLA-DQB1-201ENST00000374943 GRPEL1Q9HAV7 217 aa21.13■□□□□ 0.97
HLA-DQB1-201ENST00000374943 NAP1L2Q9ULW6 460 aaPredicted RBP21.13■□□□□ 0.97
HLA-DQB1-201ENST00000374943 TACC3Q9Y6A5 838 aa21.13■□□□□ 0.97
HLA-DQB1-201ENST00000374943 CDK5RAP2Q96SN8 1893 aa21.12■□□□□ 0.97
HLA-DQB1-201ENST00000374943 H3BQV1 296 aa21.12■□□□□ 0.97
HLA-DQB1-201ENST00000374943 ATP2B4P23634 1241 aa21.12■□□□□ 0.97
HLA-DQB1-201ENST00000374943 LIFRP42702 1097 aa21.12■□□□□ 0.97
HLA-DQB1-201ENST00000374943 IFFO2Q5TF58 517 aa21.12■□□□□ 0.97
HLA-DQB1-201ENST00000374943 ZNF804AQ7Z570 1209 aa21.12■□□□□ 0.97
HLA-DQB1-201ENST00000374943 IGDCC4Q8TDY8 1250 aa21.12■□□□□ 0.97
HLA-DQB1-201ENST00000374943 SYAP1Q96A49 352 aaPredicted RBP21.12■□□□□ 0.97
HLA-DQB1-201ENST00000374943 PODXL2Q9NZ53 605 aa21.12■□□□□ 0.97
HLA-DQB1-201ENST00000374943 NID2Q14112 1375 aa21.12■□□□□ 0.97
HLA-DQB1-201ENST00000374943 FIBPO43427 364 aa21.12■□□□□ 0.97
HLA-DQB1-201ENST00000374943 XRCC6P12956 609 aaKnown RBP eCLIP21.12■□□□□ 0.97
HLA-DQB1-201ENST00000374943 GPSM2P81274 684 aa21.12■□□□□ 0.97
HLA-DQB1-201ENST00000374943 PPARAQ07869 468 aa21.12■□□□□ 0.97
HLA-DQB1-201ENST00000374943 FERMT3Q86UX7 667 aa21.12■□□□□ 0.97
HLA-DQB1-201ENST00000374943 WDR66Q8TBY9 1149 aa21.12■□□□□ 0.97
HLA-DQB1-201ENST00000374943 RBM27Q9P2N5 1060 aaKnown RBP21.12■□□□□ 0.97
HLA-DQB1-201ENST00000374943 CHAF1AQ13111 956 aaPredicted RBP21.11■□□□□ 0.97
HLA-DQB1-201ENST00000374943 COL23A1Q86Y22 540 aaPredicted RBP21.11■□□□□ 0.97
HLA-DQB1-201ENST00000374943 LY9Q9HBG7 655 aa21.11■□□□□ 0.97
HLA-DQB1-201ENST00000374943 DYNLL1P63167 89 aaKnown RBP21.1■□□□□ 0.97
HLA-DQB1-201ENST00000374943 APOA5Q6Q788 366 aa21.1■□□□□ 0.97
HLA-DQB1-201ENST00000374943 SDR42E1Q8WUS8 393 aa21.1■□□□□ 0.97
HLA-DQB1-201ENST00000374943 ZSWIM5Q9P217 1185 aa21.1■□□□□ 0.97
HLA-DQB1-201ENST00000374943 NAV1Q8NEY1 1877 aa21.1■□□□□ 0.97
HLA-DQB1-201ENST00000374943 KDM4AO75164 1064 aa21.09■□□□□ 0.97
HLA-DQB1-201ENST00000374943 PCP11498 1178 aaKnown RBP21.09■□□□□ 0.97
HLA-DQB1-201ENST00000374943 FDPSP14324 419 aaKnown RBP21.09■□□□□ 0.97
HLA-DQB1-201ENST00000374943 PRDX5P30044 214 aa21.09■□□□□ 0.97
HLA-DQB1-201ENST00000374943 SLC51AQ86UW1 340 aa21.09■□□□□ 0.97
HLA-DQB1-201ENST00000374943 SCAND2PQ9GZW5 306 aaPredicted RBP21.09■□□□□ 0.97
HLA-DQB1-201ENST00000374943 GGA1Q9UJY5 639 aa21.09■□□□□ 0.97
HLA-DQB1-201ENST00000374943 TMEM67Q5HYA8 995 aa21.09■□□□□ 0.97
HLA-DQB1-201ENST00000374943 UFL1O94874 794 aa21.08■□□□□ 0.96
HLA-DQB1-201ENST00000374943 METAP2P50579 478 aaKnown RBP eCLIP21.08■□□□□ 0.96
HLA-DQB1-201ENST00000374943 KLHL34Q8N239 644 aa21.08■□□□□ 0.96
HLA-DQB1-201ENST00000374943 CRNKL1Q9BZJ0 848 aaKnown RBP21.08■□□□□ 0.96
HLA-DQB1-201ENST00000374943 INCENPQ9NQS7 918 aa21.08■□□□□ 0.96
HLA-DQB1-201ENST00000374943 MYH6P13533 1939 aa21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms