RNA–Protein interactions for RNA: ENST00000374733.1

ABCA1-201, Transcript of ATP binding cassette subfamily A member 1, humanhuman

TSL 2 BASIC

Gene ABCA1, Length 923 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1-201ENST00000374733 ZBED3Q96IU2 234 aaPredicted RBP13.96□□□□□ -0.17
ABCA1-201ENST00000374733 UNC93B1Q9H1C4 597 aa13.96□□□□□ -0.17
ABCA1-201ENST00000374733 PPP2R3BQ9Y5P8 575 aa13.96□□□□□ -0.17
ABCA1-201ENST00000374733 MYPNQ86TC9 1320 aa13.95□□□□□ -0.18
ABCA1-201ENST00000374733 U2AF1L5P0DN76 240 aaPredicted RBP13.95□□□□□ -0.18
ABCA1-201ENST00000374733 SYN1P17600 705 aa13.95□□□□□ -0.18
ABCA1-201ENST00000374733 GTF2A2P52657 109 aa13.95□□□□□ -0.18
ABCA1-201ENST00000374733 U2AF1Q01081 240 aaKnown RBP eCLIP13.95□□□□□ -0.18
ABCA1-201ENST00000374733 STRIP1Q5VSL9 837 aa13.95□□□□□ -0.18
ABCA1-201ENST00000374733 TRIM47Q96LD4 638 aa13.95□□□□□ -0.18
ABCA1-201ENST00000374733 MED23Q9ULK4 1368 aa13.95□□□□□ -0.18
ABCA1-201ENST00000374733 CLRN2A0PK11 232 aa13.94□□□□□ -0.18
ABCA1-201ENST00000374733 ATP5J2-PTCD1G3V325 749 aa13.94□□□□□ -0.18
ABCA1-201ENST00000374733 IRS4O14654 1257 aaPredicted RBP13.94□□□□□ -0.18
ABCA1-201ENST00000374733 MGAMO43451 1857 aa13.94□□□□□ -0.18
ABCA1-201ENST00000374733 SGPL1O95470 568 aa13.94□□□□□ -0.18
ABCA1-201ENST00000374733 ATP2B4P23634 1241 aa13.94□□□□□ -0.18
ABCA1-201ENST00000374733 MAGEA10P43363 369 aaPredicted RBP13.94□□□□□ -0.18
ABCA1-201ENST00000374733 PSMC4P43686 418 aa13.94□□□□□ -0.18
ABCA1-201ENST00000374733 VEZTQ9HBM0 779 aa13.94□□□□□ -0.18
ABCA1-201ENST00000374733 ZNF804BA4D1E1 1349 aa13.93□□□□□ -0.18
ABCA1-201ENST00000374733 FMNL1O95466 1100 aaPredicted RBP13.93□□□□□ -0.18
ABCA1-201ENST00000374733 TFRCP02786 760 aaKnown RBP13.93□□□□□ -0.18
ABCA1-201ENST00000374733 EIF4G2P78344 907 aaKnown RBP eCLIP13.93□□□□□ -0.18
ABCA1-201ENST00000374733 DLGAP5Q15398 846 aa13.93□□□□□ -0.18
ABCA1-201ENST00000374733 CCDC85AQ96PX6 553 aaPredicted RBP13.93□□□□□ -0.18
ABCA1-201ENST00000374733 KCNK17Q96T54 332 aa13.93□□□□□ -0.18
ABCA1-201ENST00000374733 UBE2OQ9C0C9 1292 aaKnown RBP13.93□□□□□ -0.18
ABCA1-201ENST00000374733 PCDHAC2Q9Y5I4 1007 aa13.93□□□□□ -0.18
ABCA1-201ENST00000374733 HOXD10P28358 340 aa13.92□□□□□ -0.18
ABCA1-201ENST00000374733 DIS3LQ8TF46 1054 aaKnown RBP13.92□□□□□ -0.18
ABCA1-201ENST00000374733 PAWRQ96IZ0 340 aaKnown RBP13.92□□□□□ -0.18
ABCA1-201ENST00000374733 TMEM265A0A087WTH1 108 aa13.91□□□□□ -0.18
ABCA1-201ENST00000374733 MMP14P50281 582 aa13.91□□□□□ -0.18
ABCA1-201ENST00000374733 TTLL5Q6EMB2 1281 aa13.91□□□□□ -0.18
ABCA1-201ENST00000374733 MAFAQ8NHW3 353 aaPredicted RBP13.91□□□□□ -0.18
ABCA1-201ENST00000374733 SYMPKQ92797 1274 aaKnown RBP13.91□□□□□ -0.18
ABCA1-201ENST00000374733 CFAP53Q96M91 514 aa13.91□□□□□ -0.18
ABCA1-201ENST00000374733 DEFB118Q96PH6 123 aa13.91□□□□□ -0.18
ABCA1-201ENST00000374733 CPA4Q9UI42 421 aa13.91□□□□□ -0.18
ABCA1-201ENST00000374733 NUDCQ9Y266 331 aa13.91□□□□□ -0.18
ABCA1-201ENST00000374733 PPP1R3GB7ZBB8 358 aa13.9□□□□□ -0.18
ABCA1-201ENST00000374733 BTBD19C9JJ37 291 aa13.9□□□□□ -0.18
ABCA1-201ENST00000374733 PRKCZQ05513 592 aa13.9□□□□□ -0.18
ABCA1-201ENST00000374733 VGLL4Q14135 290 aa13.9□□□□□ -0.18
ABCA1-201ENST00000374733 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.9□□□□□ -0.18
ABCA1-201ENST00000374733 ISCA1Q9BUE6 129 aa13.9□□□□□ -0.18
ABCA1-201ENST00000374733 AOX1Q06278 1338 aa13.9□□□□□ -0.19
ABCA1-201ENST00000374733 MYO1BO43795 1136 aa13.89□□□□□ -0.19
ABCA1-201ENST00000374733 GTF2IP78347 998 aa13.89□□□□□ -0.19
ABCA1-201ENST00000374733 RASA3Q14644 834 aa13.89□□□□□ -0.19
ABCA1-201ENST00000374733 POTEEQ6S8J3 1075 aa13.89□□□□□ -0.19
ABCA1-201ENST00000374733 NECAB2Q7Z6G3 386 aa13.89□□□□□ -0.19
ABCA1-201ENST00000374733 ANKRD18AQ8IVF6 992 aa13.89□□□□□ -0.19
ABCA1-201ENST00000374733 COA1Q9GZY4 146 aa13.89□□□□□ -0.19
ABCA1-201ENST00000374733 TSPYL4Q9UJ04 414 aa13.89□□□□□ -0.19
ABCA1-201ENST00000374733 DDX60LQ5H9U9 1706 aaKnown RBP13.89□□□□□ -0.19
ABCA1-201ENST00000374733 ARAP2Q8WZ64 1704 aa13.88□□□□□ -0.19
ABCA1-201ENST00000374733 F8W031 263 aaPredicted RBP13.88□□□□□ -0.19
ABCA1-201ENST00000374733 TNFRSF10AO00220 468 aa13.88□□□□□ -0.19
ABCA1-201ENST00000374733 CETPP11597 493 aa13.88□□□□□ -0.19
ABCA1-201ENST00000374733 PSEN2P49810 448 aa13.88□□□□□ -0.19
ABCA1-201ENST00000374733 TSR1Q2NL82 804 aaKnown RBP13.88□□□□□ -0.19
ABCA1-201ENST00000374733 CCDC152Q4G0S7 254 aa13.88□□□□□ -0.19
ABCA1-201ENST00000374733 C17orf99Q6UX52 265 aa13.88□□□□□ -0.19
ABCA1-201ENST00000374733 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.88□□□□□ -0.19
ABCA1-201ENST00000374733 TXNRD3Q86VQ6 643 aa13.88□□□□□ -0.19
ABCA1-201ENST00000374733 ZCCHC17Q9NP64 241 aaKnown RBP13.88□□□□□ -0.19
ABCA1-201ENST00000374733 CSADQ9Y600 493 aa13.88□□□□□ -0.19
ABCA1-201ENST00000374733 INHAP05111 366 aa13.87□□□□□ -0.19
ABCA1-201ENST00000374733 CFAP100Q494V2 611 aa13.87□□□□□ -0.19
ABCA1-201ENST00000374733 ZNF697Q5TEC3 545 aa13.87□□□□□ -0.19
ABCA1-201ENST00000374733 FAM109BQ6ICB4 259 aaPredicted RBP13.87□□□□□ -0.19
ABCA1-201ENST00000374733 HELBQ8NG08 1087 aaPredicted RBP13.87□□□□□ -0.19
ABCA1-201ENST00000374733 PLBD2Q8NHP8 589 aa13.87□□□□□ -0.19
ABCA1-201ENST00000374733 PER1O15534 1290 aaPredicted RBP13.86□□□□□ -0.19
ABCA1-201ENST00000374733 ELNP15502 786 aa13.86□□□□□ -0.19
ABCA1-201ENST00000374733 KLRK1P26718 216 aa13.86□□□□□ -0.19
ABCA1-201ENST00000374733 CCT4P50991 539 aaKnown RBP13.86□□□□□ -0.19
ABCA1-201ENST00000374733 LSM11P83369 360 aaKnown RBP eCLIP13.86□□□□□ -0.19
ABCA1-201ENST00000374733 MTMR14Q8NCE2 650 aa13.86□□□□□ -0.19
ABCA1-201ENST00000374733 PRMT6Q96LA8 375 aaPredicted RBP13.86□□□□□ -0.19
ABCA1-201ENST00000374733 CDX2Q99626 313 aaPredicted RBP13.86□□□□□ -0.19
ABCA1-201ENST00000374733 GABRQQ9UN88 632 aa13.86□□□□□ -0.19
ABCA1-201ENST00000374733 ADGRA2Q96PE1 1338 aa13.86□□□□□ -0.19
ABCA1-201ENST00000374733 SPDYE5A6NIY4 337 aa13.85□□□□□ -0.19
ABCA1-201ENST00000374733 ADCY3O60266 1144 aa13.85□□□□□ -0.19
ABCA1-201ENST00000374733 CERS5Q8N5B7 392 aa13.85□□□□□ -0.19
ABCA1-201ENST00000374733 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.85□□□□□ -0.19
ABCA1-201ENST00000374733 SLC4A5Q9BY07 1137 aa13.85□□□□□ -0.19
ABCA1-201ENST00000374733 COL2A1P02458 1487 aaPredicted RBP13.85□□□□□ -0.19
ABCA1-201ENST00000374733 FAM205AQ6ZU69 1335 aa13.85□□□□□ -0.19
ABCA1-201ENST00000374733 RBM5P52756 815 aaKnown RBP eCLIP13.84□□□□□ -0.19
ABCA1-201ENST00000374733 FCGRTP55899 365 aa13.84□□□□□ -0.19
ABCA1-201ENST00000374733 SNAPC2Q13487 334 aa13.84□□□□□ -0.19
ABCA1-201ENST00000374733 KRTAP3-3Q9BYR6 98 aa13.84□□□□□ -0.19
ABCA1-201ENST00000374733 KRTAP3-2Q9BYR7 98 aa13.84□□□□□ -0.19
ABCA1-201ENST00000374733 PAK6Q9NQU5 681 aaPredicted RBP13.84□□□□□ -0.19
ABCA1-201ENST00000374733 CHPF2Q9P2E5 772 aa13.84□□□□□ -0.19
ABCA1-201ENST00000374733 MYH3P11055 1940 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms