RNA–Protein interactions for RNA: ENST00000374379.8

CLIC4-201, Transcript of chloride intracellular channel 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIC4, Length 4,346 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-201ENST00000374379 OFD1O75665 1012 aa15.59■□□□□ 0.09
CLIC4-201ENST00000374379 RABL6Q3YEC7 729 aaPredicted RBP15.59■□□□□ 0.09
CLIC4-201ENST00000374379 MYSM1Q5VVJ2 828 aa15.59■□□□□ 0.09
CLIC4-201ENST00000374379 TMTC2Q8N394 836 aa15.59■□□□□ 0.09
CLIC4-201ENST00000374379 ZNF274Q96GC6 653 aaPredicted RBP15.59■□□□□ 0.09
CLIC4-201ENST00000374379 DACH1Q9UI36 760 aa15.59■□□□□ 0.09
CLIC4-201ENST00000374379 GNAT2P19087 354 aa15.58■□□□□ 0.09
CLIC4-201ENST00000374379 RFX5P48382 616 aaPredicted RBP15.58■□□□□ 0.09
CLIC4-201ENST00000374379 HEATR3Q7Z4Q2 680 aa15.58■□□□□ 0.09
CLIC4-201ENST00000374379 BRAPQ7Z569 592 aa15.58■□□□□ 0.09
CLIC4-201ENST00000374379 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.58■□□□□ 0.09
CLIC4-201ENST00000374379 V9GYY5 206 aaPredicted RBP15.58■□□□□ 0.09
CLIC4-201ENST00000374379 CYP2D7A0A087X1C5 515 aa15.58■□□□□ 0.08
CLIC4-201ENST00000374379 RPS8P62241 208 aaKnown RBP15.58■□□□□ 0.08
CLIC4-201ENST00000374379 RASGRF1Q13972 1273 aa15.58■□□□□ 0.08
CLIC4-201ENST00000374379 ZNF174Q15697 407 aa15.58■□□□□ 0.08
CLIC4-201ENST00000374379 STAMQ92783 540 aa15.58■□□□□ 0.08
CLIC4-201ENST00000374379 TMEM87BQ96K49 555 aa15.58■□□□□ 0.08
CLIC4-201ENST00000374379 SRP68Q9UHB9 627 aaKnown RBP15.58■□□□□ 0.08
CLIC4-201ENST00000374379 PATL2C9JE40 543 aaKnown RBP15.58■□□□□ 0.08
CLIC4-201ENST00000374379 CBFA2T2O43439 604 aa15.58■□□□□ 0.08
CLIC4-201ENST00000374379 UBASH3AP57075 661 aa15.58■□□□□ 0.08
CLIC4-201ENST00000374379 LRMPQ12912 555 aa15.58■□□□□ 0.08
CLIC4-201ENST00000374379 VPS54Q9P1Q0 977 aa15.58■□□□□ 0.08
CLIC4-201ENST00000374379 ZNF202O95125 648 aa15.57■□□□□ 0.08
CLIC4-201ENST00000374379 CCDC96Q2M329 555 aa15.57■□□□□ 0.08
CLIC4-201ENST00000374379 ERFEQ4G0M1 354 aa15.57■□□□□ 0.08
CLIC4-201ENST00000374379 CRACR2BQ8N4Y2 399 aaPredicted RBP15.57■□□□□ 0.08
CLIC4-201ENST00000374379 NOC3LQ8WTT2 800 aaKnown RBP15.57■□□□□ 0.08
CLIC4-201ENST00000374379 CYP19A1P11511 503 aaPredicted RBP15.57■□□□□ 0.08
CLIC4-201ENST00000374379 ADD2P35612 726 aa15.57■□□□□ 0.08
CLIC4-201ENST00000374379 TRAPPC3LQ5T215 181 aa15.57■□□□□ 0.08
CLIC4-201ENST00000374379 CLIC6Q96NY7 704 aa15.57■□□□□ 0.08
CLIC4-201ENST00000374379 ISCA1Q9BUE6 129 aa15.57■□□□□ 0.08
CLIC4-201ENST00000374379 CDCA7Q9BWT1 371 aaPredicted RBP15.57■□□□□ 0.08
CLIC4-201ENST00000374379 SEC63Q9UGP8 760 aaKnown RBP15.57■□□□□ 0.08
CLIC4-201ENST00000374379 UBR1Q8IWV7 1749 aa15.57■□□□□ 0.08
CLIC4-201ENST00000374379 PCDHA7Q9UN72 937 aa15.57■□□□□ 0.08
CLIC4-201ENST00000374379 TRIM75PA6NK02 468 aa15.57■□□□□ 0.08
CLIC4-201ENST00000374379 BTBD18B2RXH4 712 aa15.57■□□□□ 0.08
CLIC4-201ENST00000374379 LDHBP07195 334 aaKnown RBP15.57■□□□□ 0.08
CLIC4-201ENST00000374379 MCM7P33993 719 aa15.57■□□□□ 0.08
CLIC4-201ENST00000374379 NAP1L1P55209 391 aaKnown RBP15.57■□□□□ 0.08
CLIC4-201ENST00000374379 CNBD1Q8NA66 436 aa15.57■□□□□ 0.08
CLIC4-201ENST00000374379 NYXQ9GZU5 481 aa15.57■□□□□ 0.08
CLIC4-201ENST00000374379 ARHGAP23Q9P227 1491 aa15.56■□□□□ 0.08
CLIC4-201ENST00000374379 FER1L4A9Z1Z3 1794 aa15.56■□□□□ 0.08
CLIC4-201ENST00000374379 DYNLL1P63167 89 aaKnown RBP15.56■□□□□ 0.08
CLIC4-201ENST00000374379 MAGEC2Q9UBF1 373 aaPredicted RBP15.56■□□□□ 0.08
CLIC4-201ENST00000374379 EIF6P56537 245 aaKnown RBP15.56■□□□□ 0.08
CLIC4-201ENST00000374379 LCORLQ8N3X6 602 aa15.56■□□□□ 0.08
CLIC4-201ENST00000374379 DENND2AQ9ULE3 1009 aa15.56■□□□□ 0.08
CLIC4-201ENST00000374379 KRT18P05783 430 aaKnown RBP15.56■□□□□ 0.08
CLIC4-201ENST00000374379 KIF5BP33176 963 aa15.56■□□□□ 0.08
CLIC4-201ENST00000374379 HS1BP3Q53T59 392 aa15.56■□□□□ 0.08
CLIC4-201ENST00000374379 USP21Q9UK80 565 aa15.56■□□□□ 0.08
CLIC4-201ENST00000374379 ZNF609O15014 1411 aa15.55■□□□□ 0.08
CLIC4-201ENST00000374379 KDM6AO15550 1401 aaPredicted RBP15.55■□□□□ 0.08
CLIC4-201ENST00000374379 SPTY2D1Q68D10 685 aaPredicted RBP15.55■□□□□ 0.08
CLIC4-201ENST00000374379 FBXO18Q8NFZ0 1043 aa15.55■□□□□ 0.08
CLIC4-201ENST00000374379 VWA3AA6NCI4 1184 aa15.55■□□□□ 0.08
CLIC4-201ENST00000374379 SLIT1O75093 1534 aa15.55■□□□□ 0.08
CLIC4-201ENST00000374379 POLR2DO15514 142 aaKnown RBP15.55■□□□□ 0.08
CLIC4-201ENST00000374379 LDHCP07864 332 aa15.55■□□□□ 0.08
CLIC4-201ENST00000374379 NDUFA8P51970 172 aa15.55■□□□□ 0.08
CLIC4-201ENST00000374379 PPARAQ07869 468 aa15.55■□□□□ 0.08
CLIC4-201ENST00000374379 COL9A3Q14050 684 aaPredicted RBP15.55■□□□□ 0.08
CLIC4-201ENST00000374379 URI1O94763 535 aaPredicted RBP15.54■□□□□ 0.08
CLIC4-201ENST00000374379 UBA7P41226 1012 aa15.54■□□□□ 0.08
CLIC4-201ENST00000374379 APOA5Q6Q788 366 aa15.54■□□□□ 0.08
CLIC4-201ENST00000374379 ZBTB9Q96C00 473 aa15.54■□□□□ 0.08
CLIC4-201ENST00000374379 NRBP1Q9UHY1 535 aa15.54■□□□□ 0.08
CLIC4-201ENST00000374379 CARMIL3Q8ND23 1372 aa15.54■□□□□ 0.08
CLIC4-201ENST00000374379 UFL1O94874 794 aa15.54■□□□□ 0.08
CLIC4-201ENST00000374379 PTPN21Q16825 1174 aa15.54■□□□□ 0.08
CLIC4-201ENST00000374379 REREQ9P2R6 1566 aa15.54■□□□□ 0.08
CLIC4-201ENST00000374379 CAVIN2O95810 425 aa15.54■□□□□ 0.08
CLIC4-201ENST00000374379 ZNF654Q8IZM8 581 aa15.54■□□□□ 0.08
CLIC4-201ENST00000374379 KRI1Q8N9T8 703 aaKnown RBP15.54■□□□□ 0.08
CLIC4-201ENST00000374379 ZSWIM5Q9P217 1185 aa15.54■□□□□ 0.08
CLIC4-201ENST00000374379 RPAP1Q9BWH6 1393 aaPredicted RBP15.54■□□□□ 0.08
CLIC4-201ENST00000374379 USP42Q9H9J4 1324 aaKnown RBP15.54■□□□□ 0.08
CLIC4-201ENST00000374379 UBE3CQ15386 1083 aa15.54■□□□□ 0.08
CLIC4-201ENST00000374379 UIMC1Q96RL1 719 aa15.54■□□□□ 0.08
CLIC4-201ENST00000374379 TANGO6Q9C0B7 1094 aa15.54■□□□□ 0.08
CLIC4-201ENST00000374379 ZNF287Q9HBT7 754 aa15.54■□□□□ 0.08
CLIC4-201ENST00000374379 KCNH3Q9ULD8 1083 aa15.54■□□□□ 0.08
CLIC4-201ENST00000374379 ST5P78524 1137 aa15.53■□□□□ 0.08
CLIC4-201ENST00000374379 RESTQ13127 1097 aa15.53■□□□□ 0.08
CLIC4-201ENST00000374379 CLEC17AQ6ZS10 378 aa15.53■□□□□ 0.08
CLIC4-201ENST00000374379 TRMT1LQ7Z2T5 733 aaKnown RBP15.53■□□□□ 0.08
CLIC4-201ENST00000374379 MAPKAPK5Q8IW41 473 aa15.53■□□□□ 0.08
CLIC4-201ENST00000374379 PRDM10Q9NQV6 1147 aa15.53■□□□□ 0.08
CLIC4-201ENST00000374379 MAPK8IP1Q9UQF2 711 aa15.53■□□□□ 0.08
CLIC4-201ENST00000374379 MRVI1Q9Y6F6 885 aa15.53■□□□□ 0.08
CLIC4-201ENST00000374379 TNKSO95271 1327 aa15.53■□□□□ 0.08
CLIC4-201ENST00000374379 IDEP14735 1019 aa15.53■□□□□ 0.08
CLIC4-201ENST00000374379 TBC1D10CQ8IV04 446 aa15.53■□□□□ 0.08
CLIC4-201ENST00000374379 PDCL2Q8N4E4 241 aa15.53■□□□□ 0.08
CLIC4-201ENST00000374379 GPR101Q96P66 508 aaPredicted RBP15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms