RNA–Protein interactions for RNA: ENST00000373720.3

SNRNP40-202, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 1 (best) BASIC

Gene SNRNP40, Length 1,087 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-202ENST00000373720 ZNF467Q7Z7K2 595 aaPredicted RBP10.19□□□□□ -0.78
SNRNP40-202ENST00000373720 VPS37DQ86XT2 251 aa10.19□□□□□ -0.78
SNRNP40-202ENST00000373720 SPNS2Q8IVW8 549 aa10.19□□□□□ -0.78
SNRNP40-202ENST00000373720 JMYQ8N9B5 988 aa10.19□□□□□ -0.78
SNRNP40-202ENST00000373720 KCNG4Q8TDN1 519 aa10.19□□□□□ -0.78
SNRNP40-202ENST00000373720 STAG1Q8WVM7 1258 aa10.19□□□□□ -0.78
SNRNP40-202ENST00000373720 ACSBG1Q96GR2 724 aa10.19□□□□□ -0.78
SNRNP40-202ENST00000373720 L3MBTL3Q96JM7 780 aaPredicted RBP10.19□□□□□ -0.78
SNRNP40-202ENST00000373720 C8orf37Q96NL8 207 aa10.19□□□□□ -0.78
SNRNP40-202ENST00000373720 PUS7LQ9H0K6 701 aaKnown RBP10.19□□□□□ -0.78
SNRNP40-202ENST00000373720 LRP2BPQ9P2M1 347 aa10.19□□□□□ -0.78
SNRNP40-202ENST00000373720 RBM27Q9P2N5 1060 aaKnown RBP10.19□□□□□ -0.78
SNRNP40-202ENST00000373720 DOCK2Q92608 1830 aa10.19□□□□□ -0.78
SNRNP40-202ENST00000373720 A0A1W2PQ27 194 aa10.18□□□□□ -0.78
SNRNP40-202ENST00000373720 A0A1W2PQ64 194 aa10.18□□□□□ -0.78
SNRNP40-202ENST00000373720 A0A1W2PQD8 194 aa10.18□□□□□ -0.78
SNRNP40-202ENST00000373720 PTPDC1A2A3K4 754 aa10.18□□□□□ -0.78
SNRNP40-202ENST00000373720 YEATS4O95619 227 aa10.18□□□□□ -0.78
SNRNP40-202ENST00000373720 APPP05067 770 aa10.18□□□□□ -0.78
SNRNP40-202ENST00000373720 HCLS1P14317 486 aaPredicted RBP10.18□□□□□ -0.78
SNRNP40-202ENST00000373720 PHKA1P46020 1223 aa10.18□□□□□ -0.78
SNRNP40-202ENST00000373720 PIP4K2BP78356 416 aa10.18□□□□□ -0.78
SNRNP40-202ENST00000373720 GSTO1P78417 241 aa10.18□□□□□ -0.78
SNRNP40-202ENST00000373720 ST3GAL1Q11201 340 aa10.18□□□□□ -0.78
SNRNP40-202ENST00000373720 RESTQ13127 1097 aa10.18□□□□□ -0.78
SNRNP40-202ENST00000373720 RASGRF1Q13972 1273 aa10.18□□□□□ -0.78
SNRNP40-202ENST00000373720 AKNAD1Q5T1N1 836 aa10.18□□□□□ -0.78
SNRNP40-202ENST00000373720 RBM43Q6ZSC3 357 aaKnown RBP10.18□□□□□ -0.78
SNRNP40-202ENST00000373720 STOX1Q6ZVD7 989 aa10.18□□□□□ -0.78
SNRNP40-202ENST00000373720 FBXO33Q7Z6M2 555 aa10.18□□□□□ -0.78
SNRNP40-202ENST00000373720 NBPF5PQ86XG9 351 aaPredicted RBP10.18□□□□□ -0.78
SNRNP40-202ENST00000373720 GAS2L3Q86XJ1 694 aa10.18□□□□□ -0.78
SNRNP40-202ENST00000373720 IFNL3Q8IZI9 196 aa10.18□□□□□ -0.78
SNRNP40-202ENST00000373720 NECAB1Q8N987 351 aa10.18□□□□□ -0.78
SNRNP40-202ENST00000373720 ATP8A2Q9NTI2 1148 aa10.18□□□□□ -0.78
SNRNP40-202ENST00000373720 CCDC39Q9UFE4 941 aa10.18□□□□□ -0.78
SNRNP40-202ENST00000373720 CCNL1Q9UK58 526 aaPredicted RBP10.18□□□□□ -0.78
SNRNP40-202ENST00000373720 COL24A1Q17RW2 1714 aa10.17□□□□□ -0.78
SNRNP40-202ENST00000373720 SYCE3A1L190 88 aa10.17□□□□□ -0.78
SNRNP40-202ENST00000373720 XBP1P17861 261 aa10.17□□□□□ -0.78
SNRNP40-202ENST00000373720 RFC4P35249 363 aa10.17□□□□□ -0.78
SNRNP40-202ENST00000373720 CLCN1P35523 988 aa10.17□□□□□ -0.78
SNRNP40-202ENST00000373720 DNM1Q05193 864 aaKnown RBP10.17□□□□□ -0.78
SNRNP40-202ENST00000373720 TRIM29Q14134 588 aa10.17□□□□□ -0.78
SNRNP40-202ENST00000373720 SCARF1Q14162 830 aa10.17□□□□□ -0.78
SNRNP40-202ENST00000373720 MAP3K11Q16584 847 aa10.17□□□□□ -0.78
SNRNP40-202ENST00000373720 FAM196AQ6ZSG2 479 aa10.17□□□□□ -0.78
SNRNP40-202ENST00000373720 SLF2Q8IX21 1173 aa10.17□□□□□ -0.78
SNRNP40-202ENST00000373720 ELOA2Q8IYF1 753 aaPredicted RBP10.17□□□□□ -0.78
SNRNP40-202ENST00000373720 LINC00116Q8NCU8 138 aa10.17□□□□□ -0.78
SNRNP40-202ENST00000373720 FLAD1Q8NFF5 587 aa10.17□□□□□ -0.78
SNRNP40-202ENST00000373720 FBXO18Q8NFZ0 1043 aa10.17□□□□□ -0.78
SNRNP40-202ENST00000373720 WDR66Q8TBY9 1149 aa10.17□□□□□ -0.78
SNRNP40-202ENST00000373720 CERKQ8TCT0 537 aa10.17□□□□□ -0.78
SNRNP40-202ENST00000373720 ESR2Q92731 530 aa10.17□□□□□ -0.78
SNRNP40-202ENST00000373720 ZNF287Q9HBT7 754 aa10.17□□□□□ -0.78
SNRNP40-202ENST00000373720 POLR3EQ9NVU0 708 aa10.17□□□□□ -0.78
SNRNP40-202ENST00000373720 RTEL1Q9NZ71 1219 aa10.17□□□□□ -0.78
SNRNP40-202ENST00000373720 USP25Q9UHP3 1055 aa10.17□□□□□ -0.78
SNRNP40-202ENST00000373720 MINPP1Q9UNW1 487 aa10.17□□□□□ -0.78
SNRNP40-202ENST00000373720 CNPY2Q9Y2B0 182 aa10.17□□□□□ -0.78
SNRNP40-202ENST00000373720 KLF18A0A0U1RQI7 1052 aa10.16□□□□□ -0.78
SNRNP40-202ENST00000373720 SH2B2O14492 632 aaPredicted RBP10.16□□□□□ -0.78
SNRNP40-202ENST00000373720 ZBTB43O43298 467 aa10.16□□□□□ -0.78
SNRNP40-202ENST00000373720 BBOX1O75936 387 aa10.16□□□□□ -0.78
SNRNP40-202ENST00000373720 LDHCP07864 332 aa10.16□□□□□ -0.78
SNRNP40-202ENST00000373720 FGRP09769 529 aa10.16□□□□□ -0.78
SNRNP40-202ENST00000373720 TRIM22Q8IYM9 498 aa10.16□□□□□ -0.78
SNRNP40-202ENST00000373720 LEO1Q8WVC0 666 aaPredicted RBP10.16□□□□□ -0.78
SNRNP40-202ENST00000373720 CCDC34Q96HJ3 373 aa10.16□□□□□ -0.78
SNRNP40-202ENST00000373720 C8orf76Q96K31 380 aa10.16□□□□□ -0.78
SNRNP40-202ENST00000373720 MAP3K14Q99558 947 aa10.16□□□□□ -0.78
SNRNP40-202ENST00000373720 NUP62CLQ9H1M0 184 aa10.16□□□□□ -0.78
SNRNP40-202ENST00000373720 RTN4Q9NQC3 1192 aaKnown RBP10.16□□□□□ -0.78
SNRNP40-202ENST00000373720 PIH1D3Q9NQM4 214 aaKnown RBP10.16□□□□□ -0.78
SNRNP40-202ENST00000373720 LAMA4Q16363 1823 aa10.16□□□□□ -0.78
SNRNP40-202ENST00000373720 LY75O60449 1722 aa10.16□□□□□ -0.78
SNRNP40-202ENST00000373720 TIAM2Q8IVF5 1701 aa10.16□□□□□ -0.78
SNRNP40-202ENST00000373720 MYH14Q7Z406 1995 aaKnown RBP10.15□□□□□ -0.78
SNRNP40-202ENST00000373720 MAGEB6P1A0A0J9YX57 407 aa10.15□□□□□ -0.78
SNRNP40-202ENST00000373720 CCDC69A6NI79 296 aa10.15□□□□□ -0.78
SNRNP40-202ENST00000373720 GOLGA6L6A8MZA4 724 aa10.15□□□□□ -0.78
SNRNP40-202ENST00000373720 ESPNB1AK53 854 aa10.15□□□□□ -0.78
SNRNP40-202ENST00000373720 FOXP2O15409 715 aa10.15□□□□□ -0.78
SNRNP40-202ENST00000373720 FIBPO43427 364 aa10.15□□□□□ -0.78
SNRNP40-202ENST00000373720 KCNQ2O43526 872 aa10.15□□□□□ -0.78
SNRNP40-202ENST00000373720 IFNAR1P17181 557 aa10.15□□□□□ -0.78
SNRNP40-202ENST00000373720 HIBADHP31937 336 aaKnown RBP10.15□□□□□ -0.78
SNRNP40-202ENST00000373720 TDO2P48775 406 aa10.15□□□□□ -0.78
SNRNP40-202ENST00000373720 METAP2P50579 478 aaKnown RBP eCLIP10.15□□□□□ -0.78
SNRNP40-202ENST00000373720 APOBRQ0VD83 1088 aa10.15□□□□□ -0.78
SNRNP40-202ENST00000373720 SAFBQ15424 915 aaKnown RBP eCLIP10.15□□□□□ -0.78
SNRNP40-202ENST00000373720 ERFEQ4G0M1 354 aa10.15□□□□□ -0.78
SNRNP40-202ENST00000373720 SBK1Q52WX2 424 aa10.15□□□□□ -0.78
SNRNP40-202ENST00000373720 MEX3CQ5U5Q3 659 aaKnown RBP10.15□□□□□ -0.78
SNRNP40-202ENST00000373720 ADALQ6DHV7 355 aa10.15□□□□□ -0.78
SNRNP40-202ENST00000373720 CDC37L1Q7L3B6 337 aa10.15□□□□□ -0.78
SNRNP40-202ENST00000373720 ZSCAN30Q86W11 494 aa10.15□□□□□ -0.78
SNRNP40-202ENST00000373720 IQCA1Q86XH1 822 aa10.15□□□□□ -0.78
SNRNP40-202ENST00000373720 AMOTL1Q8IY63 956 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms