RNA–Protein interactions for RNA: ENST00000373233.7

CHD6-203, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD6, Length 10,818 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-203ENST00000373233 SAMD15Q9P1V8 674 aa7.47□□□□□ -1.21
CHD6-203ENST00000373233 PXDNLA1KZ92 1463 aa7.47□□□□□ -1.21
CHD6-203ENST00000373233 ERICH2A1L162 156 aa7.47□□□□□ -1.21
CHD6-203ENST00000373233 SLC3A2P08195 630 aaKnown RBP7.47□□□□□ -1.21
CHD6-203ENST00000373233 BLOC1S2Q6QNY1 142 aa7.47□□□□□ -1.21
CHD6-203ENST00000373233 N4BP2L2Q92802 583 aaPredicted RBP7.47□□□□□ -1.21
CHD6-203ENST00000373233 RPGRQ92834 1020 aaKnown RBP7.47□□□□□ -1.21
CHD6-203ENST00000373233 SNX21Q969T3 373 aa7.47□□□□□ -1.21
CHD6-203ENST00000373233 RIPOR2Q9Y4F9 1068 aa7.47□□□□□ -1.21
CHD6-203ENST00000373233 LIG3P49916 1009 aa7.47□□□□□ -1.21
CHD6-203ENST00000373233 ZKSCAN8Q15776 578 aaPredicted RBP7.47□□□□□ -1.21
CHD6-203ENST00000373233 ISM2Q6H9L7 571 aa7.47□□□□□ -1.21
CHD6-203ENST00000373233 SART3Q15020 963 aaKnown RBP7.47□□□□□ -1.21
CHD6-203ENST00000373233 GEMIN8Q9NWZ8 242 aaKnown RBP7.47□□□□□ -1.21
CHD6-203ENST00000373233 DNAI1Q9UI46 699 aa7.47□□□□□ -1.21
CHD6-203ENST00000373233 SUFUQ9UMX1 484 aa7.47□□□□□ -1.21
CHD6-203ENST00000373233 NIP7Q9Y221 180 aaKnown RBP eCLIP7.47□□□□□ -1.21
CHD6-203ENST00000373233 CEP104O60308 925 aa7.47□□□□□ -1.21
CHD6-203ENST00000373233 SH3GL3Q99963 347 aa7.47□□□□□ -1.21
CHD6-203ENST00000373233 PXDNQ92626 1479 aa7.47□□□□□ -1.21
CHD6-203ENST00000373233 LMO7Q8WWI1 1683 aa7.47□□□□□ -1.21
CHD6-203ENST00000373233 KDM4FA0A1W2PPD8 638 aa7.47□□□□□ -1.21
CHD6-203ENST00000373233 CTAGE15A4D2H0 777 aa7.47□□□□□ -1.21
CHD6-203ENST00000373233 IRS4O14654 1257 aaPredicted RBP7.47□□□□□ -1.21
CHD6-203ENST00000373233 CTAGE8P0CG41 777 aa7.47□□□□□ -1.21
CHD6-203ENST00000373233 PSMC4P43686 418 aa7.47□□□□□ -1.21
CHD6-203ENST00000373233 NEDD9Q14511 834 aa7.47□□□□□ -1.21
CHD6-203ENST00000373233 SNCBQ16143 134 aa7.47□□□□□ -1.21
CHD6-203ENST00000373233 CTAGE6Q86UF2 777 aa7.47□□□□□ -1.21
CHD6-203ENST00000373233 CTAGE4Q8IX94 777 aa7.47□□□□□ -1.21
CHD6-203ENST00000373233 CTNNBL1Q8WYA6 563 aaPredicted RBP7.47□□□□□ -1.21
CHD6-203ENST00000373233 CAPN7Q9Y6W3 813 aa7.47□□□□□ -1.21
CHD6-203ENST00000373233 U3KPZ7 1027 aaPredicted RBP7.47□□□□□ -1.21
CHD6-203ENST00000373233 CTAGE5O15320 804 aa7.47□□□□□ -1.21
CHD6-203ENST00000373233 RNF8O76064 485 aa7.47□□□□□ -1.21
CHD6-203ENST00000373233 TSPYL2Q9H2G4 693 aaPredicted RBP7.47□□□□□ -1.21
CHD6-203ENST00000373233 SLC24A3Q9HC58 644 aa7.47□□□□□ -1.21
CHD6-203ENST00000373233 ANKIB1Q9P2G1 1089 aa7.47□□□□□ -1.21
CHD6-203ENST00000373233 CPDO75976 1380 aa7.46□□□□□ -1.21
CHD6-203ENST00000373233 HEG1Q9ULI3 1381 aa7.46□□□□□ -1.21
CHD6-203ENST00000373233 NDUFAB1O14561 156 aa7.46□□□□□ -1.21
CHD6-203ENST00000373233 ANAPC15P60006 121 aa7.46□□□□□ -1.21
CHD6-203ENST00000373233 SPA17Q15506 151 aa7.46□□□□□ -1.21
CHD6-203ENST00000373233 LRP2BPQ9P2M1 347 aa7.46□□□□□ -1.21
CHD6-203ENST00000373233 ODF2LQ9ULJ1 636 aa7.46□□□□□ -1.21
CHD6-203ENST00000373233 IBTKQ9P2D0 1353 aaPredicted RBP7.46□□□□□ -1.21
CHD6-203ENST00000373233 GNPATO15228 680 aa7.46□□□□□ -1.21
CHD6-203ENST00000373233 PIBF1Q8WXW3 757 aa7.46□□□□□ -1.21
CHD6-203ENST00000373233 STIM2Q9P246 746 aa7.46□□□□□ -1.21
CHD6-203ENST00000373233 MEGF6O75095 1541 aa7.46□□□□□ -1.21
CHD6-203ENST00000373233 RFC4P35249 363 aa7.46□□□□□ -1.22
CHD6-203ENST00000373233 PPP2R3AQ06190 1150 aa7.46□□□□□ -1.22
CHD6-203ENST00000373233 HLTFQ14527 1009 aaKnown RBP eCLIP7.46□□□□□ -1.229e-7■■■■□ 21.5
CHD6-203ENST00000373233 ZNF513Q8N8E2 541 aaPredicted RBP7.46□□□□□ -1.22
CHD6-203ENST00000373233 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.46□□□□□ -1.22
CHD6-203ENST00000373233 MORC4Q8TE76 937 aa7.46□□□□□ -1.22
CHD6-203ENST00000373233 AIDAQ96BJ3 306 aa7.46□□□□□ -1.22
CHD6-203ENST00000373233 RGPD1P0DJD0 1748 aa7.46□□□□□ -1.22
CHD6-203ENST00000373233 STIM1Q13586 685 aa7.46□□□□□ -1.22
CHD6-203ENST00000373233 UBE2HP62256 183 aa7.46□□□□□ -1.22
CHD6-203ENST00000373233 SF3B2Q13435 895 aaKnown RBP7.46□□□□□ -1.22
CHD6-203ENST00000373233 LRRC43Q8N309 656 aa7.46□□□□□ -1.22
CHD6-203ENST00000373233 RAB3IL1Q8TBN0 382 aa7.46□□□□□ -1.22
CHD6-203ENST00000373233 FAM200AQ8TCP9 573 aa7.46□□□□□ -1.22
CHD6-203ENST00000373233 USO1O60763 962 aaKnown RBP7.46□□□□□ -1.22
CHD6-203ENST00000373233 SMIM24O75264 130 aa7.46□□□□□ -1.22
CHD6-203ENST00000373233 STK3Q13188 491 aa7.46□□□□□ -1.22
CHD6-203ENST00000373233 CACNA2D3Q8IZS8 1091 aa7.46□□□□□ -1.22
CHD6-203ENST00000373233 JPH2Q9BR39 696 aaPredicted RBP7.46□□□□□ -1.22
CHD6-203ENST00000373233 USP16Q9Y5T5 823 aa7.46□□□□□ -1.22
CHD6-203ENST00000373233 SLIT3O75094 1523 aa7.46□□□□□ -1.22
CHD6-203ENST00000373233 SCN11AQ9UI33 1791 aa7.46□□□□□ -1.22
CHD6-203ENST00000373233 TTF1Q15361 905 aaPredicted RBP7.46□□□□□ -1.22
CHD6-203ENST00000373233 MAP7D1Q3KQU3 841 aa7.46□□□□□ -1.22
CHD6-203ENST00000373233 SNRKQ9NRH2 765 aa7.46□□□□□ -1.22
CHD6-203ENST00000373233 ANO10Q9NW15 660 aa7.46□□□□□ -1.22
CHD6-203ENST00000373233 CCNL1Q9UK58 526 aaPredicted RBP7.46□□□□□ -1.22
CHD6-203ENST00000373233 STAMBPO95630 424 aa7.45□□□□□ -1.22
CHD6-203ENST00000373233 TUBB4BP68371 445 aa7.45□□□□□ -1.22
CHD6-203ENST00000373233 FAM160A1Q05DH4 1040 aa7.45□□□□□ -1.22
CHD6-203ENST00000373233 ATP2B3Q16720 1220 aa7.45□□□□□ -1.22
CHD6-203ENST00000373233 LARP1BQ659C4 914 aaKnown RBP7.45□□□□□ -1.22
CHD6-203ENST00000373233 TTLL7Q6ZT98 887 aa7.45□□□□□ -1.22
CHD6-203ENST00000373233 SETDB2Q96T68 719 aa7.45□□□□□ -1.22
CHD6-203ENST00000373233 NMIQ13287 307 aaPredicted RBP7.45□□□□□ -1.22
CHD6-203ENST00000373233 SSH3Q8TE77 659 aa7.45□□□□□ -1.22
CHD6-203ENST00000373233 DIXDC1Q155Q3 683 aa7.45□□□□□ -1.22
CHD6-203ENST00000373233 CAVIN4Q5BKX8 364 aa7.45□□□□□ -1.22
CHD6-203ENST00000373233 SOS2Q07890 1332 aaPredicted RBP7.45□□□□□ -1.22
CHD6-203ENST00000373233 MED1Q15648 1581 aaPredicted RBP7.45□□□□□ -1.22
CHD6-203ENST00000373233 TRIM68Q6AZZ1 485 aa7.45□□□□□ -1.22
CHD6-203ENST00000373233 CABS1Q96KC9 395 aa7.45□□□□□ -1.22
CHD6-203ENST00000373233 ASAP1Q9ULH1 1129 aa7.45□□□□□ -1.22
CHD6-203ENST00000373233 LDHAL6AQ6ZMR3 332 aa7.45□□□□□ -1.22
CHD6-203ENST00000373233 PPFIBP2Q8ND30 876 aa7.45□□□□□ -1.22
CHD6-203ENST00000373233 CHMLP26374 656 aa7.45□□□□□ -1.22
CHD6-203ENST00000373233 ZFYVE27Q5T4F4 411 aa7.45□□□□□ -1.22
CHD6-203ENST00000373233 PAG1Q9NWQ8 432 aa7.45□□□□□ -1.22
CHD6-203ENST00000373233 SERPINA10Q9UK55 444 aa7.45□□□□□ -1.22
CHD6-203ENST00000373233 DDX19AQ9NUU7 478 aaKnown RBP7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms