RNA–Protein interactions for RNA: ENST00000372547.5

SNX21-205, Transcript of sorting nexin family member 21, humanhuman

TSL 1 (best)

Gene SNX21, Length 2,794 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21-205ENST00000372547 ANKRD65E5RJM6 399 aa13.75□□□□□ -0.21
SNX21-205ENST00000372547 TMEM139Q8IV31 216 aa13.75□□□□□ -0.21
SNX21-205ENST00000372547 ALG1Q9BT22 464 aa13.75□□□□□ -0.21
SNX21-205ENST00000372547 CWC15Q9P013 229 aaKnown RBP13.75□□□□□ -0.21
SNX21-205ENST00000372547 LAMA4Q16363 1823 aa13.75□□□□□ -0.21
SNX21-205ENST00000372547 RNF113AO15541 343 aaKnown RBP13.75□□□□□ -0.21
SNX21-205ENST00000372547 N4BP1O75113 896 aaKnown RBP13.75□□□□□ -0.21
SNX21-205ENST00000372547 RHOXF2BP0C7M4 288 aa13.75□□□□□ -0.21
SNX21-205ENST00000372547 ATP2B1P20020 1258 aa13.75□□□□□ -0.21
SNX21-205ENST00000372547 SLC39A14Q15043 492 aa13.75□□□□□ -0.21
SNX21-205ENST00000372547 IMMTQ16891 758 aaKnown RBP13.75□□□□□ -0.21
SNX21-205ENST00000372547 ZNF790Q6PG37 636 aa13.75□□□□□ -0.21
SNX21-205ENST00000372547 VPS37DQ86XT2 251 aa13.75□□□□□ -0.21
SNX21-205ENST00000372547 FOXP4Q8IVH2 680 aaPredicted RBP13.75□□□□□ -0.21
SNX21-205ENST00000372547 CCDC85AQ96PX6 553 aaPredicted RBP13.75□□□□□ -0.21
SNX21-205ENST00000372547 RHOXF2Q9BQY4 288 aa13.75□□□□□ -0.21
SNX21-205ENST00000372547 DENND2AQ9ULE3 1009 aa13.75□□□□□ -0.21
SNX21-205ENST00000372547 DIP2AQ14689 1571 aa13.74□□□□□ -0.21
SNX21-205ENST00000372547 SOWAHDA6NJG2 315 aa13.74□□□□□ -0.21
SNX21-205ENST00000372547 LEKR1Q6ZMV7 388 aa13.74□□□□□ -0.21
SNX21-205ENST00000372547 METTL16Q86W50 562 aaKnown RBP13.74□□□□□ -0.21
SNX21-205ENST00000372547 MRPL44Q9H9J2 332 aaKnown RBP13.74□□□□□ -0.21
SNX21-205ENST00000372547 PHF8Q9UPP1 1060 aa13.74□□□□□ -0.21
SNX21-205ENST00000372547 HPS5Q9UPZ3 1129 aa13.74□□□□□ -0.21
SNX21-205ENST00000372547 NFE2L3Q9Y4A8 694 aa13.74□□□□□ -0.21
SNX21-205ENST00000372547 ATP8B1O43520 1251 aa13.74□□□□□ -0.21
SNX21-205ENST00000372547 CHMP4BP1P59074 171 aa13.74□□□□□ -0.21
SNX21-205ENST00000372547 SLC20A2Q08357 652 aa13.74□□□□□ -0.21
SNX21-205ENST00000372547 LRRC24Q50LG9 513 aa13.74□□□□□ -0.21
SNX21-205ENST00000372547 CCDC102BQ68D86 513 aa13.74□□□□□ -0.21
SNX21-205ENST00000372547 GRAMD1CQ8IYS0 662 aa13.74□□□□□ -0.21
SNX21-205ENST00000372547 KDM3BQ7LBC6 1761 aa13.74□□□□□ -0.21
SNX21-205ENST00000372547 UBE2Q2LH0YL09 131 aa13.73□□□□□ -0.21
SNX21-205ENST00000372547 KCNA4P22459 653 aa13.73□□□□□ -0.21
SNX21-205ENST00000372547 TXLNAP40222 546 aa13.73□□□□□ -0.21
SNX21-205ENST00000372547 RSRC2Q7L4I2 434 aaKnown RBP13.73□□□□□ -0.21
SNX21-205ENST00000372547 MICU3Q86XE3 530 aa13.73□□□□□ -0.21
SNX21-205ENST00000372547 TC2NQ8N9U0 490 aa13.73□□□□□ -0.21
SNX21-205ENST00000372547 ANKRD24Q8TF21 1146 aa13.73□□□□□ -0.21
SNX21-205ENST00000372547 RABGGTAQ92696 567 aa13.73□□□□□ -0.21
SNX21-205ENST00000372547 CCDC102AQ96A19 550 aa13.73□□□□□ -0.21
SNX21-205ENST00000372547 ZNF496Q96IT1 587 aaPredicted RBP13.73□□□□□ -0.21
SNX21-205ENST00000372547 TUBE1Q9UJT0 475 aa13.73□□□□□ -0.21
SNX21-205ENST00000372547 FGAP02671 866 aa13.73□□□□□ -0.21
SNX21-205ENST00000372547 MUM1L1Q5H9M0 696 aa13.73□□□□□ -0.21
SNX21-205ENST00000372547 JAKMIP3Q5VZ66 844 aa13.73□□□□□ -0.21
SNX21-205ENST00000372547 SPECC1LQ69YQ0 1117 aa13.73□□□□□ -0.21
SNX21-205ENST00000372547 MYL10Q9BUA6 226 aa13.73□□□□□ -0.21
SNX21-205ENST00000372547 UBXN6Q9BZV1 441 aa13.73□□□□□ -0.21
SNX21-205ENST00000372547 PLEKHA4Q9H4M7 779 aa13.73□□□□□ -0.21
SNX21-205ENST00000372547 KCNH3Q9ULD8 1083 aa13.73□□□□□ -0.21
SNX21-205ENST00000372547 RRP15Q9Y3B9 282 aaKnown RBP13.73□□□□□ -0.21
SNX21-205ENST00000372547 ANKARQ7Z5J8 1434 aa13.73□□□□□ -0.21
SNX21-205ENST00000372547 ABCC6O95255 1503 aa13.73□□□□□ -0.21
SNX21-205ENST00000372547 BMP6P22004 513 aa13.72□□□□□ -0.21
SNX21-205ENST00000372547 KRT40Q6A162 431 aa13.72□□□□□ -0.21
SNX21-205ENST00000372547 KLHL10Q6JEL2 608 aa13.72□□□□□ -0.21
SNX21-205ENST00000372547 JMYQ8N9B5 988 aa13.72□□□□□ -0.21
SNX21-205ENST00000372547 KIFC2Q96AC6 838 aa13.72□□□□□ -0.21
SNX21-205ENST00000372547 CHMP4CQ96CF2 233 aa13.72□□□□□ -0.21
SNX21-205ENST00000372547 SAMSN1Q9NSI8 373 aaKnown RBP13.72□□□□□ -0.21
SNX21-205ENST00000372547 RNF216Q9NWF9 866 aaPredicted RBP13.72□□□□□ -0.21
SNX21-205ENST00000372547 A0A1B0GUL7 405 aa13.72□□□□□ -0.21
SNX21-205ENST00000372547 APPP05067 770 aa13.72□□□□□ -0.21
SNX21-205ENST00000372547 FMR1Q06787 632 aaKnown RBP eCLIP13.72□□□□□ -0.21
SNX21-205ENST00000372547 KIF4BQ2VIQ3 1234 aa13.72□□□□□ -0.21
SNX21-205ENST00000372547 FOXR1Q6PIV2 292 aa13.72□□□□□ -0.21
SNX21-205ENST00000372547 CCDC82Q8N4S0 544 aa13.72□□□□□ -0.21
SNX21-205ENST00000372547 GOLGA5Q8TBA6 731 aa13.72□□□□□ -0.21
SNX21-205ENST00000372547 C19orf44Q9H6X5 657 aa13.72□□□□□ -0.21
SNX21-205ENST00000372547 GOLGA6L9A6NEM1 432 aa13.71□□□□□ -0.21
SNX21-205ENST00000372547 STX10O60499 249 aa13.71□□□□□ -0.21
SNX21-205ENST00000372547 ZNF569Q5MCW4 686 aa13.71□□□□□ -0.21
SNX21-205ENST00000372547 FCHSD1Q86WN1 690 aa13.71□□□□□ -0.21
SNX21-205ENST00000372547 ORAI2Q96SN7 254 aa13.71□□□□□ -0.21
SNX21-205ENST00000372547 FAN1Q9Y2M0 1017 aa13.71□□□□□ -0.21
SNX21-205ENST00000372547 PALLDQ8WX93 1383 aa13.71□□□□□ -0.21
SNX21-205ENST00000372547 RGPD2P0DJD1 1756 aa13.71□□□□□ -0.21
SNX21-205ENST00000372547 ZNF213O14771 459 aa13.71□□□□□ -0.21
SNX21-205ENST00000372547 ACTN2P35609 894 aa13.71□□□□□ -0.21
SNX21-205ENST00000372547 STX17P56962 302 aa13.71□□□□□ -0.21
SNX21-205ENST00000372547 ANTXR2P58335 489 aa13.71□□□□□ -0.21
SNX21-205ENST00000372547 PI16Q6UXB8 463 aa13.71□□□□□ -0.21
SNX21-205ENST00000372547 NCOA7Q8NI08 942 aa13.71□□□□□ -0.21
SNX21-205ENST00000372547 PUS3Q9BZE2 481 aaKnown RBP13.71□□□□□ -0.21
SNX21-205ENST00000372547 MED1Q15648 1581 aaPredicted RBP13.71□□□□□ -0.22
SNX21-205ENST00000372547 SLIT1O75093 1534 aa13.71□□□□□ -0.22
SNX21-205ENST00000372547 CCDC175P0C221 793 aa13.71□□□□□ -0.22
SNX21-205ENST00000372547 PRR29P0C7W0 189 aa13.71□□□□□ -0.22
SNX21-205ENST00000372547 METAP2P50579 478 aaKnown RBP eCLIP13.71□□□□□ -0.22
SNX21-205ENST00000372547 TRIM29Q14134 588 aa13.71□□□□□ -0.22
SNX21-205ENST00000372547 NFXL1Q6ZNB6 911 aa13.71□□□□□ -0.22
SNX21-205ENST00000372547 TTC5Q8N0Z6 440 aa13.71□□□□□ -0.22
SNX21-205ENST00000372547 EXOC4Q96A65 974 aa13.71□□□□□ -0.22
SNX21-205ENST00000372547 PNKPQ96T60 521 aa13.71□□□□□ -0.22
SNX21-205ENST00000372547 CCDC151A5D8V7 595 aa13.7□□□□□ -0.22
SNX21-205ENST00000372547 POLR2DO15514 142 aaKnown RBP13.7□□□□□ -0.22
SNX21-205ENST00000372547 ATG9AQ7Z3C6 839 aa13.7□□□□□ -0.22
SNX21-205ENST00000372547 SRLQ86TD4 932 aa13.7□□□□□ -0.22
SNX21-205ENST00000372547 ABCB6Q9NP58 842 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms